NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1DI4A-1IOTA
confEVID 1DI4A-1IOTA
pdbIDA 1DI4
pdbIDB 1IOT
pdbChainA A
pdbChainB A
identity 0.604700028896332
indelSize 1
alignment <alignment>
<seq1>KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYND-RSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV</seq1>
<seq2>KVFGRCELAAALKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL</seq2>
<ss_1> HHHHHHHHHH GGG HHHHHHHHHH EEE - EEEEE EE GGGG HHHHHHHHHGGG GGGG HHHHH GGGG </ss_1>
<ss_2> HHHHHHHHHH GGG HHHHHHHHHH EEEEE EEEEE EE GGGG HHHHHHHHHHH GGGG HHHHH GGGGG </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1DI4</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1DI4A</entryIDChain>
<sequence>TNYND-RSTDY</sequence>
<secondary-structure>EE - EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 343 CA THR A 43 0.803 7.755 8.008 1.00 14.90 C </line>
<line>ATOM 350 CA ASN A 44 0.805 6.190 4.548 1.00 15.50 C </line>
<line>ATOM 358 CA TYR A 45 -0.376 2.621 4.034 1.00 13.97 C </line>
<line>ATOM 370 CA ASN A 46 1.190 0.522 1.259 1.00 17.25 C </line>
<line>ATOM 378 CA ASP A 49 0.335 -3.160 0.607 1.00 26.20 C </line>
<line>ATOM 386 CA ARG A 50 3.102 -4.602 2.769 1.00 20.78 C </line>
<line>ATOM 397 CA SER A 51 4.483 -1.722 4.879 1.00 13.54 C </line>
<line>ATOM 403 CA THR A 52 3.397 1.577 6.490 1.00 11.04 C </line>
<line>ATOM 410 CA ASP A 53 5.281 4.882 6.543 1.00 10.78 C </line>
<line>ATOM 418 CA TYR A 54 5.253 6.803 9.779 1.00 8.35 C </line>
</atom-coordinate>
<distance-map>
<line> TYR ASP THR SER ARG ASP ASN TYR ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 4.88 5.52 6.87 10.64 13.62 13.20 9.90 6.60 3.80 </line>
<line>ASN CA 6.89 5.07 5.64 8.73 11.18 10.16 6.56 3.79 </line>
<line>TYR CA 9.07 6.59 4.62 6.57 8.12 6.76 3.82 </line>
<line>ASN CA 11.34 7.98 5.77 5.38 5.67 3.84 </line>
<line>ASP CA 14.41 11.15 8.15 6.13 3.80 </line>
<line>ARG CA 13.56 10.44 7.22 3.83 </line>
<line>SER CA 9.86 6.86 3.83 </line>
<line>THR CA 6.45 3.80 </line>
<line>ASP CA 3.76 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>THR CA 291</line>
<line>ASN CA 264</line>
<line>TYR CA 211</line>
<line>ASN CA 184</line>
<line>ASP CA 148</line>
<line>ARG CA 191</line>
<line>SER CA 255</line>
<line>THR CA 308</line>
<line>ASP CA 398</line>
<line>TYR CA 430</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1IOT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1IOTA</entryIDChain>
<sequence>TNRNTDGSTDY</sequence>
<secondary-structure>EEEE EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 333 CA THR A 43 10.567 16.020 17.757 1.00 17.61 C </line>
<line>ATOM 340 CA ASN A 44 12.666 18.958 18.875 1.00 21.79 C </line>
<line>ATOM 348 CA ARG A 45 14.957 19.103 21.865 1.00 22.74 C </line>
<line>ATOM 359 CA ASN A 46 15.072 22.180 24.046 1.00 28.17 C </line>
<line>ATOM 367 CA THR A 47 17.952 23.861 25.865 1.00 32.18 C </line>
<line>ATOM 374 CA ASP A 48 16.595 22.893 29.273 1.00 25.42 C </line>
<line>ATOM 382 CA GLY A 49 16.972 19.252 28.213 1.00 22.61 C </line>
<line>ATOM 386 CA SER A 50 13.278 18.612 27.661 1.00 19.22 C </line>
<line>ATOM 392 CA THR A 51 11.882 17.623 24.228 1.00 17.83 C </line>
<line>ATOM 399 CA ASP A 52 8.739 18.552 22.236 1.00 16.87 C </line>
<line>ATOM 407 CA TYR A 53 6.739 15.734 20.639 1.00 17.02 C </line>
</atom-coordinate>
<distance-map>
<line> TYR ASP THR SER GLY ASP THR ASN ARG ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 4.80 5.46 6.80 10.59 12.68 14.70 13.48 9.89 6.76 3.78 </line>
<line>ASN CA 6.97 5.18 5.57 8.81 10.29 11.79 10.04 6.55 3.77 </line>
<line>ARG CA 8.97 6.25 4.15 6.05 6.66 8.48 6.90 3.77 </line>
<line>ASN CA 11.07 7.52 5.57 5.39 5.44 5.49 3.80 </line>
<line>THR CA 14.80 11.24 8.86 7.25 5.26 3.79 </line>
<line>ASP CA 14.93 11.41 8.69 5.65 3.81 </line>
<line>GLY CA 13.21 10.20 6.67 3.79 </line>
<line>SER CA 10.02 7.07 3.84 </line>
<line>THR CA 6.55 3.84 </line>
<line>ASP CA 3.81 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>THR CA 296</line>
<line>ASN CA 274</line>
<line>ARG CA 224</line>
<line>ASN CA 206</line>
<line>THR CA 141</line>
<line>ASP CA 157</line>
<line>GLY CA 189</line>
<line>SER CA 258</line>
<line>THR CA 317</line>
<line>ASP CA 403</line>
<line>TYR CA 431</line>
</n14>
</entryChain>
<parallel>
<x>-12.451000213623047</x>
<y>-18.304000854492188</y>
<z>-19.48900032043457</z>
</parallel>
<rotation>
<x>-0.8009999990463257</x>
<y>-0.5929999947547913</y>
<z>-0.0820000022649765</z>
<x>0.05700000002980232</x>
<y>0.05999999865889549</y>
<z>-0.996999979019165</z>
<x>0.5960000157356262</x>
<y>-0.8029999732971191</y>
<z>-0.014000000432133675</z>
</rotation>
<rmsd>0.8837249875068665</rmsd>
<dmax>1.5303770303726196</dmax>
</indel>