NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1DLFH-1QLRD
confEVID 1DLFH-1QLRD
pdbIDA 1DLF
pdbIDB 1QLR
pdbChainA H
pdbChainB D
identity 0.442600011825562
indelSize 2
alignment <alignment>
<seq1>EVKLEESGGGLVQPGGSMKLSCATSGFTFSDAWMDWVRQSPEKGLEWVAEIRNKANNHATYYAESVKGRFTISRDDSKRRVYLQMNTLRAEDTGIYYCTGIYYH--YPWFAYWGQGTLVTVS------------------------------------------------------------------------------------------</seq1>
<seq2>EVQLQQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINH---SGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPTDEHVVCKVQHPNGNKEKNVPLPV</seq2>
<ss_1> EEEEE EEEEEEEE EEEEEEEE EEEEEEEE EEEEE EEEEEEE EEEEEEE GGG EEEEEEEE -- EEEE ------------------------------------------------------------------------------------------</ss_1>
<ss_2> EEEEE EEEEEEEE EEEEEE EEEEEEE --- EEEEE EEEEEEE EEEEEEE GGG EEEEEEE EEEE EEEEE EEEEEEEEE EEEEE EEE EEE EEEEEEEE EEEEEEE EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1DLF</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1DLFH</entryIDChain>
<sequence>GIYYH--YPWFA</sequence>
<secondary-structure>EE -- </secondary-structure>
<atom-coordinate>
<line>ATOM 1740 CA GLY H 94 7.527 25.077 17.385 1.00 9.45 C </line>
<line>ATOM 1744 CA ILE H 95 10.662 23.648 18.987 1.00 11.76 C </line>
<line>ATOM 1752 CA TYR H 96 13.282 26.200 20.137 1.00 12.60 C </line>
<line>ATOM 1764 CA TYR H 97 14.923 27.833 23.181 1.00 14.83 C </line>
<line>ATOM 1776 CA HIS H 98 15.340 25.514 26.213 1.00 15.33 C </line>
<line>ATOM 1786 CA TYR H 99 12.127 23.478 25.898 1.00 11.42 C </line>
<line>ATOM 1798 CA PRO H 100 11.709 20.786 23.222 1.00 9.08 C </line>
<line>ATOM 1805 CA TRP H 101 7.905 21.268 23.004 1.00 8.12 C </line>
<line>ATOM 1819 CA PHE H 102 5.380 24.025 22.181 1.00 7.59 C </line>
<line>ATOM 1830 CA ALA H 103 6.340 26.355 25.021 1.00 9.17 C </line>
</atom-coordinate>
<distance-map>
<line> ALA PHE TRP PRO TYR HIS TYR TYR ILE GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 7.83 5.36 6.80 8.36 9.81 11.80 9.79 6.48 3.80 </line>
<line>ILE CA 7.90 6.18 5.42 5.22 7.07 8.81 7.30 3.83 </line>
<line>TYR CA 8.49 8.45 7.84 6.43 6.48 6.45 3.82 </line>
<line>TYR CA 8.90 10.32 9.61 7.75 5.85 3.84 </line>
<line>HIS CA 9.12 10.85 9.14 6.67 3.82 </line>
<line>TYR CA 6.52 7.72 5.58 3.82 </line>
<line>PRO CA 7.94 7.19 3.84 </line>
<line>TRP CA 5.69 3.83 </line>
<line>PHE CA 3.80 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>GLY CA 475</line>
<line>ILE CA 377</line>
<line>TYR CA 326</line>
<line>TYR CA 249</line>
<line>HIS CA 176</line>
<line>TYR CA 198</line>
<line>PRO CA 229</line>
<line>TRP CA 245</line>
<line>PHE CA 319</line>
<line>ALA CA 259</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1QLR</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>1QLRD</entryIDChain>
<sequence>RPPHDTSGHYWN</sequence>
<secondary-structure>E </secondary-structure>
<atom-coordinate>
<line>ATOM 5634 CA ARG D 97 -44.606 91.154 109.999 1.00 20.38 C </line>
<line>ATOM 5645 CA PRO D 98 -44.010 91.726 113.711 1.00 21.87 C </line>
<line>ATOM 5652 CA PRO D 99 -46.594 90.273 116.146 1.00 24.17 C </line>
<line>ATOM 5659 CA HIS D 100 -48.149 93.585 117.393 1.00 28.46 C </line>
<line>ATOM 5669 CA ASP D 101 -48.399 97.297 116.521 1.00 44.30 C </line>
<line>ATOM 5677 CA THR D 102 -46.909 98.566 119.745 1.00 49.21 C </line>
<line>ATOM 5684 CA SER D 103 -43.727 96.587 120.201 1.00 43.89 C </line>
<line>ATOM 5690 CA GLY D 104 -40.311 95.466 119.162 1.00 32.67 C </line>
<line>ATOM 5694 CA HIS D 105 -39.634 94.987 115.509 1.00 22.24 C </line>
<line>ATOM 5704 CA TYR D 106 -38.977 91.221 115.625 1.00 20.75 C </line>
<line>ATOM 5716 CA TRP D 107 -40.927 88.973 113.180 1.00 19.37 C </line>
<line>ATOM 5730 CA ASN D 108 -43.178 85.953 113.801 1.00 19.52 C </line>
</atom-coordinate>
<distance-map>
<line> ASN TRP TYR HIS GLY SER THR ASP HIS PRO PRO ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 6.60 5.33 7.96 8.35 11.00 11.59 12.46 9.73 8.55 6.52 3.80 </line>
<line>PRO CA 5.83 4.17 5.41 5.75 7.58 8.11 9.57 7.63 5.84 3.84 </line>
<line>PRO CA 5.99 6.53 7.69 8.43 8.69 8.03 9.05 7.26 3.87 </line>
<line>HIS CA 9.79 9.55 9.64 8.83 8.25 6.04 5.65 3.82 </line>
<line>ASP CA 12.78 11.67 11.25 9.12 8.70 5.99 3.77 </line>
<line>THR CA 14.43 13.07 11.57 9.15 7.31 3.77 </line>
<line>SER CA 12.42 10.73 8.50 6.43 3.74 </line>
<line>GLY CA 11.29 8.85 5.68 3.75 </line>
<line>HIS CA 9.85 6.58 3.82 </line>
<line>TYR CA 6.98 3.85 </line>
<line>TRP CA 3.82 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>ARG CA 434</line>
<line>PRO CA 330</line>
<line>PRO CA 258</line>
<line>HIS CA 238</line>
<line>ASP CA 242</line>
<line>THR CA 174</line>
<line>SER CA 165</line>
<line>GLY CA 180</line>
<line>HIS CA 266</line>
<line>TYR CA 255</line>
<line>TRP CA 306</line>
<line>ASN CA 257</line>
</n14>
</entryChain>
<parallel>
<x>55.51900100708008</x>
<y>-68.98799896240234</y>
<z>-93.25499725341797</z>
</parallel>
<rotation>
<x>-0.5979999899864197</x>
<y>-0.7580000162124634</y>
<z>0.26100000739097595</z>
<x>0.800000011920929</x>
<y>-0.5440000295639038</y>
<z>0.2529999911785126</z>
<x>-0.04899999871850014</x>
<y>0.36000001430511475</y>
<z>0.9319999814033508</z>
</rotation>
<rmsd>2.4986228942871094</rmsd>
<dmax>3.929481029510498</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1QLR</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>1QLRD</entryIDChain>
<sequence>GEINH---SGSTN</sequence>
<secondary-structure>EEEE --- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 5275 CA GLY D 49 -36.561 98.599 105.314 1.00 22.26 C </line>
<line>ATOM 5279 CA GLU D 50 -40.208 98.821 106.390 1.00 27.08 C </line>
<line>ATOM 5288 CA ILE D 51 -43.476 100.701 105.882 1.00 27.53 C </line>
<line>ATOM 5296 CA ASN D 52 -46.970 101.088 107.421 1.00 28.57 C </line>
<line>ATOM 5304 CA HIS D 53 -50.390 101.756 105.885 1.00 32.20 C </line>
<line>ATOM 5314 CA SER D 54 -50.011 105.484 105.953 1.00 38.02 C </line>
<line>ATOM 5320 CA GLY D 55 -46.764 105.649 103.986 1.00 36.04 C </line>
<line>ATOM 5324 CA SER D 56 -44.085 106.361 106.590 1.00 35.86 C </line>
<line>ATOM 5330 CA THR D 57 -41.009 104.240 105.989 1.00 34.10 C </line>
<line>ATOM 5337 CA ASN D 58 -37.624 103.498 107.627 1.00 35.21 C </line>
</atom-coordinate>
<distance-map>
<line> ASN THR SER GLY SER HIS ASN ILE GLU GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 5.52 7.22 10.89 12.47 15.12 14.20 10.91 7.25 3.81 </line>
<line>GLU CA 5.48 5.49 8.48 9.77 11.86 10.61 7.21 3.80 </line>
<line>ILE CA 6.72 4.32 5.74 6.24 8.10 6.99 3.84 </line>
<line>ASN CA 9.65 6.89 6.07 5.71 5.54 3.81 </line>
<line>HIS CA 13.00 9.70 7.84 5.65 3.75 </line>
<line>SER CA 12.66 9.09 6.02 3.80 </line>
<line>GLY CA 10.07 6.25 3.80 </line>
<line>SER CA 7.14 3.78 </line>
<line>THR CA 3.83 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>GLY CA 397</line>
<line>GLU CA 431</line>
<line>ILE CA 384</line>
<line>ASN CA 350</line>
<line>HIS CA 287</line>
<line>SER CA 212</line>
<line>GLY CA 227</line>
<line>SER CA 223</line>
<line>THR CA 290</line>
<line>ASN CA 277</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1DLF</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1DLFH</entryIDChain>
<sequence>AEIRNKANNHATY</sequence>
<secondary-structure>EEE EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1292 CA ALA H 49 1.502 20.692 10.522 1.00 8.41 C </line>
<line>ATOM 1297 CA GLU H 50 5.235 20.520 11.142 1.00 9.02 C </line>
<line>ATOM 1306 CA ILE H 51 8.233 21.570 9.075 1.00 8.62 C </line>
<line>ATOM 1314 CA ARG H 52 11.723 20.384 10.068 1.00 9.16 C </line>
<line>ATOM 1325 CA ASN H 52A 14.900 22.403 9.832 1.00 9.76 C </line>
<line>ATOM 1337 CA LYS H 52B 17.172 22.579 6.772 1.00 14.48 C </line>
<line>ATOM 1346 CA ALA H 52C 19.432 19.831 8.162 1.00 11.97 C </line>
<line>ATOM 1351 CA ASN H 53 16.428 17.465 8.086 1.00 11.41 C </line>
<line>ATOM 1359 CA ASN H 54 15.541 18.356 4.467 1.00 15.04 C </line>
<line>ATOM 1367 CA HIS H 55 12.901 20.933 5.551 1.00 15.27 C </line>
<line>ATOM 1377 CA ALA H 56 10.662 17.852 5.695 1.00 11.47 C </line>
<line>ATOM 1382 CA THR H 57 6.938 18.404 6.138 1.00 10.93 C </line>
<line>ATOM 1390 CA ATYR H 58 4.379 16.496 8.182 0.50 10.18 C </line>
</atom-coordinate>
<distance-map>
<line> TYR THR ALA HIS ASN ASN ALA LYS ASN ARG ILE GLU ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 5.60 7.35 10.74 12.44 15.47 15.46 18.11 16.22 13.52 10.24 6.94 3.79 </line>
<line>GLU CA 5.07 5.69 8.14 9.50 12.47 12.00 14.52 12.88 9.93 6.58 3.79 </line>
<line>ILE CA 6.43 4.51 5.58 5.88 9.22 9.22 11.37 9.29 6.76 3.82 </line>
<line>ARG CA 8.52 6.50 5.16 4.70 7.08 5.88 7.96 6.74 3.77 </line>
<line>ASN CA 12.18 9.65 7.47 4.95 6.75 5.46 5.47 3.82 </line>
<line>LYS CA 14.24 11.07 8.12 4.74 5.08 5.33 3.82 </line>
<line>ALA CA 15.42 12.74 9.32 7.12 5.56 3.82 </line>
<line>ASN CA 12.09 9.73 6.25 5.56 3.83 </line>
<line>ASN CA 11.91 8.76 5.06 3.85 </line>
<line>HIS CA 9.96 6.50 3.81 </line>
<line>ALA CA 6.89 3.79 </line>
<line>THR CA 3.79 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>ALA CA 440</line>
<line>GLU CA 440</line>
<line>ILE CA 402</line>
<line>ARG CA 336</line>
<line>ASN CA 297</line>
<line>LYS CA 231</line>
<line>ALA CA 171</line>
<line>ASN CA 180</line>
<line>ASN CA 180</line>
<line>HIS CA 267</line>
<line>ALA CA 242</line>
<line>THR CA 318</line>
<line>TYR CA 308</line>
</n14>
</entryChain>
<parallel>
<x>-54.7859992980957</x>
<y>82.0479965209961</y>
<z>98.03900146484375</z>
</parallel>
<rotation>
<x>-0.9900000095367432</x>
<y>-0.12099999934434891</y>
<z>0.07400000095367432</z>
<x>0.08799999952316284</x>
<y>-0.11699999868869781</y>
<z>0.9890000224113464</z>
<x>0.11100000143051147</x>
<y>-0.9860000014305115</y>
<z>-0.12600000202655792</z>
</rotation>
<rmsd>2.423201084136963</rmsd>
<dmax>3.6452860832214355</dmax>
</indel>