NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1DLQA-2AZQA
confEVID 1DLQA-2AZQA
pdbIDA 1DLQ
pdbIDB 2AZQ
pdbChainA A
pdbChainB A
identity 0.541899979114532
indelSize 3
alignment <alignment>
<seq1>VKIFNTQDVQDFLRVASGLEQEGGNPRVKQIIHRVLSDLYKAIEDLNITSDEYWAGVAYLNQLGANQEAGLLSPGLGFDHYLDMRMDAEDAALGIENATPRTIEGPLYVAGAPESVGYARMDDGSDPNGHTLILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYFVSADGHRKLTTQINVAGDPYTYDDFAYATREGLVVDAVEHTDPEAIKANDVE-GPFAEMVFDLKLTRLVDGVDNQVVDRPRLAV--</seq1>
<seq2>VKISHTADIQAFFNQVAGLDHAEGKPRFKQIILRVLQDTARLIEDLEITEDEFWHAVDYLNRLGGRNEAGLLAAGLGIEHFLDLLQDAKDAEAGLGGGTPRTIEGPLYVAGAPLAQGEVRMDDGTDP-GVVMFLQGQVFDANGKPLAGATVDLWHANTQGTYSYF--DSTQSEFNLRRRIITDAEGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFFISAFGHRHLTTQINFAGDKYLWDDFAYATRDGLIGELRFVEDAAAARDRGVQGERFAELSFDFRLQGAQSPDAEARSHRPRALQEG</seq2>
<ss_1> HHHHHHHHHH HHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHHHH HHHHHHHHHHHHHHH EEEEE EEEEEEEEEE EEEEEE EEEEEEE EEEEEEE HHHHHH EEEEEEEEEE EEEEEEE EEE HHHH - EEEE EE --</ss_1>
<ss_2> HHHHHHHHHH HHHHHHHHHHHHHHHIIIII HHHHHHHHHHHHHHHH HHHHHHH HHHHHHHHHHHHHHH EEEEE - EEEEEEEEEE EEEEEE -- EEEEEEE EEEEEEE HHHHHH EEEEEEEEEEEE EEEEEEE EEE EEEE EE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1DLQ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1DLQA</entryIDChain>
<sequence>ANDVE-GPFAE</sequence>
<secondary-structure>H - EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 2128 CA ALA A 276 7.831 72.685 45.431 1.00 45.52 C </line>
<line>ATOM 2133 CA ASN A 277 6.288 72.722 48.929 1.00 46.94 C </line>
<line>ATOM 2141 CA ASP A 278 3.084 71.344 47.381 1.00 48.07 C </line>
<line>ATOM 2149 CA VAL A 279 1.069 74.030 49.163 1.00 44.62 C </line>
<line>ATOM 2156 CA GLU A 280 -2.040 75.540 47.476 1.00 42.09 C </line>
<line>ATOM 2165 CA GLY A 281 -1.023 79.197 47.336 1.00 36.99 C </line>
<line>ATOM 2169 CA PRO A 282 1.318 81.834 48.815 1.00 32.94 C </line>
<line>ATOM 2176 CA PHE A 283 2.787 80.635 52.115 1.00 27.59 C </line>
<line>ATOM 2187 CA ALA A 284 5.205 81.712 54.844 1.00 24.26 C </line>
<line>ATOM 2192 CA GLU A 285 8.329 79.813 55.875 1.00 23.54 C </line>
</atom-coordinate>
<distance-map>
<line> GLU ALA PHE PRO GLY GLU VAL ASP ASN ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 12.65 13.30 11.55 11.73 11.15 10.48 7.84 5.30 3.82 </line>
<line>ASN CA 10.13 10.82 9.22 10.38 9.90 8.91 5.39 3.82 </line>
<line>ASP CA 13.09 12.95 10.43 10.73 8.86 6.62 3.80 </line>
<line>VAL CA 11.45 10.41 7.44 7.82 5.87 3.85 </line>
<line>GLU CA 14.01 12.04 8.41 7.26 3.80 </line>
<line>GLY CA 12.68 10.07 6.28 3.82 </line>
<line>PRO CA 10.15 7.17 3.81 </line>
<line>PHE CA 6.75 3.80 </line>
<line>ALA CA 3.80 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>ALA CA 180</line>
<line>ASN CA 266</line>
<line>ASP CA 210</line>
<line>VAL CA 271</line>
<line>GLU CA 211</line>
<line>GLY CA 217</line>
<line>PRO CA 239</line>
<line>PHE CA 305</line>
<line>ALA CA 338</line>
<line>GLU CA 372</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2AZQ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2AZQA</entryIDChain>
<sequence>DRGVQGERFAE</sequence>
<secondary-structure> EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 2103 CA ASP A 272 39.576 18.177 -48.310 1.00 65.30 C </line>
<line>ATOM 2111 CA ARG A 273 38.834 17.822 -44.527 1.00 65.08 C </line>
<line>ATOM 2122 CA GLY A 274 41.778 17.599 -42.103 1.00 66.18 C </line>
<line>ATOM 2126 CA VAL A 275 41.683 13.778 -42.190 1.00 66.48 C </line>
<line>ATOM 2133 CA GLN A 276 43.884 11.186 -44.008 1.00 62.92 C </line>
<line>ATOM 2142 CA GLY A 277 42.595 7.702 -44.848 1.00 57.26 C </line>
<line>ATOM 2146 CA GLU A 278 40.439 4.607 -45.244 1.00 50.19 C </line>
<line>ATOM 2155 CA ARG A 279 37.464 5.722 -43.070 1.00 36.69 C </line>
<line>ATOM 2166 CA PHE A 280 35.920 7.970 -40.419 1.00 21.65 C </line>
<line>ATOM 2177 CA ALA A 281 32.494 8.762 -38.985 1.00 14.12 C </line>
<line>ATOM 2182 CA GLU A 282 30.420 11.904 -39.206 1.00 11.37 C </line>
</atom-coordinate>
<distance-map>
<line> GLU ALA PHE ARG GLU GLY GLN VAL GLY ARG ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 14.35 15.03 13.41 13.68 13.94 11.44 9.27 7.83 6.61 3.87 </line>
<line>ARG CA 11.58 12.37 11.06 12.26 13.33 10.80 8.36 5.47 3.82 </line>
<line>GLY CA 13.03 13.19 11.40 12.67 13.43 10.30 7.01 3.82 </line>
<line>VAL CA 11.80 10.95 8.37 9.14 9.75 6.69 3.86 </line>
<line>GLN CA 14.31 12.68 9.31 8.48 7.53 3.81 </line>
<line>GLY CA 14.06 11.73 8.02 5.78 3.79 </line>
<line>GLU CA 13.79 10.93 7.42 3.85 </line>
<line>ARG CA 10.14 7.12 3.80 </line>
<line>PHE CA 6.87 3.80 </line>
<line>ALA CA 3.77 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>ASP CA 133</line>
<line>ARG CA 202</line>
<line>GLY CA 206</line>
<line>VAL CA 239</line>
<line>GLN CA 190</line>
<line>GLY CA 193</line>
<line>GLU CA 183</line>
<line>ARG CA 240</line>
<line>PHE CA 307</line>
<line>ALA CA 351</line>
<line>GLU CA 349</line>
</n14>
</entryChain>
<parallel>
<x>-37.53300094604492</x>
<y>63.89099884033203</y>
<z>92.06500244140625</z>
</parallel>
<rotation>
<x>-0.7689999938011169</x>
<y>-0.5360000133514404</y>
<z>-0.3479999899864197</z>
<x>0.5619999766349792</x>
<y>-0.8270000219345093</y>
<z>0.03200000151991844</z>
<x>-0.3050000071525574</x>
<y>-0.17100000381469727</y>
<z>0.9369999766349792</z>
</rotation>
<rmsd>1.7441389560699463</rmsd>
<dmax>3.186060905456543</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2AZQ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2AZQA</entryIDChain>
<sequence>DGTDP-GVVMF</sequence>
<secondary-structure> - EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 938 CA ASP A 124 44.626 11.465 -26.685 1.00 13.25 C </line>
<line>ATOM 946 CA GLY A 125 45.554 9.637 -29.929 1.00 14.48 C </line>
<line>ATOM 950 CA THR A 126 46.020 6.307 -28.213 1.00 19.99 C </line>
<line>ATOM 957 CA ASP A 127 43.416 4.019 -29.853 1.00 23.95 C </line>
<line>ATOM 965 CA PRO A 128 42.900 2.072 -33.284 1.00 21.61 C </line>
<line>ATOM 972 CA GLY A 129 39.432 3.559 -33.468 1.00 13.39 C </line>
<line>ATOM 976 CA VAL A 130 37.352 5.225 -36.103 1.00 9.97 C </line>
<line>ATOM 983 CA VAL A 131 37.740 9.016 -35.945 1.00 10.17 C </line>
<line>ATOM 990 CA MET A 132 34.321 10.515 -35.340 1.00 12.41 C </line>
<line>ATOM 998 CA PHE A 133 33.429 14.054 -36.327 1.00 12.26 C </line>
</atom-coordinate>
<distance-map>
<line> PHE MET VAL VAL GLY PRO ASP THR GLY ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 15.00 13.49 11.80 13.44 11.64 11.61 8.18 5.56 3.84 </line>
<line>GLY CA 14.40 12.50 9.88 11.17 9.32 8.69 6.01 3.78 </line>
<line>THR CA 16.86 14.33 11.65 11.77 8.86 7.31 3.83 </line>
<line>ASP CA 15.57 12.45 9.71 8.79 5.40 3.98 </line>
<line>PRO CA 15.57 12.21 9.05 6.98 3.78 </line>
<line>GLY CA 12.42 8.83 6.23 3.75 </line>
<line>VAL CA 9.66 6.14 3.81 </line>
<line>VAL CA 6.64 3.78 </line>
<line>MET CA 3.78 </line>
<line>PHE CA </line>
</distance-map>
<n14>
<line>ASP CA 270</line>
<line>GLY CA 235</line>
<line>THR CA 222</line>
<line>ASP CA 240</line>
<line>PRO CA 206</line>
<line>GLY CA 293</line>
<line>VAL CA 344</line>
<line>VAL CA 378</line>
<line>MET CA 445</line>
<line>PHE CA 400</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1DLQ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1DLQA</entryIDChain>
<sequence>DGSDPNGHTLI</sequence>
<secondary-structure> EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 943 CA ASP A 125 -7.352 71.076 60.523 1.00 26.20 C </line>
<line>ATOM 951 CA GLY A 126 -7.736 74.121 58.291 1.00 28.95 C </line>
<line>ATOM 955 CA SER A 127 -10.763 75.374 60.228 1.00 30.64 C </line>
<line>ATOM 961 CA ASP A 128 -9.295 78.878 60.469 1.00 32.82 C </line>
<line>ATOM 969 CA PRO A 129 -10.741 80.953 57.590 1.00 33.41 C </line>
<line>ATOM 976 CA ASN A 130 -7.973 83.527 57.920 1.00 31.57 C </line>
<line>ATOM 984 CA GLY A 131 -5.150 81.060 58.448 1.00 27.75 C </line>
<line>ATOM 988 CA HIS A 132 -2.040 81.811 56.422 1.00 23.70 C </line>
<line>ATOM 998 CA THR A 133 -0.143 78.631 55.582 1.00 20.85 C </line>
<line>ATOM 1005 CA LEU A 134 3.152 78.272 57.447 1.00 18.50 C </line>
<line>ATOM 1013 CA ILE A 135 5.896 75.750 56.751 1.00 18.11 C </line>
</atom-coordinate>
<distance-map>
<line> ILE LEU THR HIS GLY ASN PRO ASP SER GLY ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 14.55 13.10 11.55 12.66 10.43 12.74 10.85 8.04 5.49 3.79 </line>
<line>GLY CA 13.82 11.68 9.24 9.75 7.41 9.42 7.50 5.46 3.81 </line>
<line>SER CA 17.02 14.48 12.04 11.49 8.19 8.92 6.17 3.81 </line>
<line>ASP CA 15.95 12.82 10.38 8.81 5.10 5.46 3.83 </line>
<line>PRO CA 17.45 14.15 11.03 8.82 5.66 3.79 </line>
<line>ASN CA 15.94 12.31 9.53 6.36 3.79 </line>
<line>GLY CA 12.37 8.81 6.26 3.79 </line>
<line>HIS CA 9.99 6.37 3.80 </line>
<line>THR CA 6.79 3.80 </line>
<line>LEU CA 3.79 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ASP CA 291</line>
<line>GLY CA 287</line>
<line>SER CA 253</line>
<line>ASP CA 283</line>
<line>PRO CA 185</line>
<line>ASN CA 212</line>
<line>GLY CA 303</line>
<line>HIS CA 330</line>
<line>THR CA 383</line>
<line>LEU CA 459</line>
<line>ILE CA 428</line>
</n14>
</entryChain>
<parallel>
<x>48.78300094604492</x>
<y>-71.32599639892578</y>
<z>-90.12899780273438</z>
</parallel>
<rotation>
<x>-0.8389999866485596</x>
<y>0.4959999918937683</y>
<z>-0.22300000488758087</z>
<x>-0.4059999883174896</x>
<y>-0.843999981880188</y>
<z>-0.3499999940395355</z>
<x>-0.3619999885559082</x>
<y>-0.2029999941587448</y>
<z>0.9100000262260437</z>
</rotation>
<rmsd>0.9244250059127808</rmsd>
<dmax>1.786188006401062</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>2AZQ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2AZQA</entryIDChain>
<sequence>TYSYF--DSTQS</sequence>
<secondary-structure> -- </secondary-structure>
<atom-coordinate>
<line>ATOM 1207 CA THR A 161 35.381 2.438 -20.721 1.00 3.78 C </line>
<line>ATOM 1214 CA TYR A 162 35.388 6.000 -19.421 1.00 4.72 C </line>
<line>ATOM 1226 CA SER A 163 38.447 7.916 -18.347 1.00 5.14 C </line>
<line>ATOM 1232 CA TYR A 164 38.873 8.737 -14.682 1.00 11.69 C </line>
<line>ATOM 1244 CA PHE A 165 37.310 5.468 -13.529 1.00 14.00 C </line>
<line>ATOM 1255 CA ASP A 166 39.612 3.662 -15.859 1.00 19.31 C </line>
<line>ATOM 1263 CA SER A 167 43.057 4.604 -14.659 1.00 22.71 C </line>
<line>ATOM 1269 CA THR A 168 44.655 3.284 -17.841 1.00 20.76 C </line>
<line>ATOM 1276 CA GLN A 169 43.121 6.279 -19.633 1.00 14.10 C </line>
<line>ATOM 1285 CA SER A 170 44.816 9.660 -19.517 1.00 12.60 C </line>
</atom-coordinate>
<distance-map>
<line> SER GLN THR SER ASP PHE TYR SER TYR THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 11.94 8.71 9.75 10.02 6.56 8.04 9.40 6.71 3.79 </line>
<line>TYR CA 10.11 7.74 9.79 9.13 6.00 6.22 6.49 3.77 </line>
<line>SER CA 6.71 5.12 7.76 6.77 5.06 5.52 3.78 </line>
<line>TYR CA 7.72 6.97 8.55 5.88 5.26 3.80 </line>
<line>PHE CA 10.48 8.47 8.79 5.92 3.74 </line>
<line>ASP CA 8.74 5.78 5.43 3.77 </line>
<line>SER CA 7.23 5.25 3.80 </line>
<line>THR CA 6.59 3.81 </line>
<line>GLN CA 3.78 </line>
<line>SER CA </line>
</distance-map>
<n14>
<line>THR CA 373</line>
<line>TYR CA 420</line>
<line>SER CA 374</line>
<line>TYR CA 302</line>
<line>PHE CA 300</line>
<line>ASP CA 263</line>
<line>SER CA 185</line>
<line>THR CA 183</line>
<line>GLN CA 253</line>
<line>SER CA 253</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1DLQ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1DLQA</entryIDChain>
<sequence>FYSHFDPTGEQQ</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 1228 CA PHE A 163 -6.921 80.705 70.637 1.00 23.85 C </line>
<line>ATOM 1239 CA TYR A 164 -5.339 77.346 71.367 1.00 21.34 C </line>
<line>ATOM 1251 CA SER A 165 -7.240 74.096 71.042 1.00 20.38 C </line>
<line>ATOM 1257 CA HIS A 166 -8.683 72.999 74.433 1.00 22.85 C </line>
<line>ATOM 1267 CA PHE A 167 -8.695 76.624 75.631 1.00 26.11 C </line>
<line>ATOM 1278 CA ASP A 168 -10.757 78.146 72.835 1.00 32.09 C </line>
<line>ATOM 1286 CA PRO A 169 -13.453 80.257 74.523 1.00 37.69 C </line>
<line>ATOM 1293 CA THR A 170 -15.555 80.001 71.363 1.00 41.75 C </line>
<line>ATOM 1300 CA GLY A 171 -15.423 76.194 71.609 1.00 45.28 C </line>
<line>ATOM 1304 CA GLU A 172 -14.728 75.641 67.837 1.00 48.47 C </line>
<line>ATOM 1313 CA GLN A 173 -11.545 73.514 67.710 1.00 45.16 C </line>
<line>ATOM 1322 CA GLN A 174 -10.972 69.852 67.094 1.00 40.94 C </line>
</atom-coordinate>
<distance-map>
<line> GLN GLN GLU GLY THR PRO ASP PHE HIS SER TYR PHE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>PHE CA 12.11 9.04 9.72 9.67 8.69 7.61 5.11 6.69 8.77 6.63 3.78 </line>
<line>TYR CA 10.30 8.16 10.17 10.15 10.56 9.18 5.67 5.47 6.28 3.78 </line>
<line>SER CA 6.89 5.47 8.29 8.47 10.20 9.42 5.66 5.44 3.85 </line>
<line>HIS CA 8.31 7.32 9.33 7.98 10.28 8.69 5.77 3.82 </line>
<line>PHE CA 11.13 8.97 9.91 7.85 8.76 6.09 3.79 </line>
<line>ASP CA 10.09 6.95 6.86 5.20 5.35 3.82 </line>
<line>PRO CA 13.02 9.77 8.22 5.37 3.80 </line>
<line>THR CA 11.93 8.46 5.67 3.82 </line>
<line>GLY CA 8.97 6.12 3.88 </line>
<line>GLU CA 6.94 3.83 </line>
<line>GLN CA 3.76 </line>
<line>GLN CA </line>
</distance-map>
<n14>
<line>PHE CA 397</line>
<line>TYR CA 444</line>
<line>SER CA 404</line>
<line>HIS CA 311</line>
<line>PHE CA 344</line>
<line>ASP CA 298</line>
<line>PRO CA 230</line>
<line>THR CA 171</line>
<line>GLY CA 175</line>
<line>GLU CA 205</line>
<line>GLN CA 277</line>
<line>GLN CA 270</line>
</n14>
</entryChain>
<parallel>
<x>49.41299819946289</x>
<y>-71.43699645996094</y>
<z>-88.62200164794922</z>
</parallel>
<rotation>
<x>-0.7820000052452087</x>
<y>0.40299999713897705</y>
<z>-0.4749999940395355</z>
<x>-0.41100001335144043</x>
<y>-0.9070000052452087</y>
<z>-0.09200000017881393</z>
<x>-0.46700000762939453</x>
<y>0.12300000339746475</y>
<z>0.875</z>
</rotation>
<rmsd>1.8621020317077637</rmsd>
<dmax>4.356173038482666</dmax>
</indel>