NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1DLYA-1RTEA
confEVID 1DLYA-1RTEA
pdbIDA 1DLY
pdbIDB 1RTE
pdbChainA A
pdbChainB A
identity 0.389800012111664
indelSize 1
alignment <alignment>
<seq1>------------SLFAKLGGREAVEAAVDKFYNKIVADPTVSTYFSNTDMKVQRSKQFAFLAYALGGASEWKGKDMRTAHKDLVPHLSDVHFQAVARHLSDTLTELGVPPEDITDAMAVVASTRTEVLNMPQQ</seq1>
<seq2>GLLSRLRKREPISIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRG--ITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTSG---</seq2>
<ss_1>------------ HHHHHHHHHHHHHHHGGG GGGG HHHHHHHHHHHHHHH HHHHH HHHHHHHHHHHHHHHHH HHHHHHHHHGGGHHHH </ss_1>
<ss_2> HHHHH HHHH HHHHHHHHHHHHHHHHH GGGG HHHHHHHHHHHHHHH HHHH -- HHHHHHHHHHHHHHHHH HHHHHHHHHHGGGHHHH ---</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1RTE</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1RTEA</entryIDChain>
<sequence>HQGRG--ITMHH</sequence>
<secondary-structure>H -- HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 658 CA HIS A 81 22.254 9.086 63.270 1.00 17.45 C </line>
<line>ATOM 668 CA GLN A 82 18.612 7.995 63.245 1.00 20.53 C </line>
<line>ATOM 677 CA GLY A 83 16.464 9.523 65.963 1.00 18.24 C </line>
<line>ATOM 681 CA ARG A 84 18.904 12.352 66.692 1.00 17.13 C </line>
<line>ATOM 692 CA GLY A 85 16.568 15.002 65.248 1.00 16.83 C </line>
<line>ATOM 696 CA ILE A 86 19.085 15.983 62.584 1.00 16.96 C </line>
<line>ATOM 704 CA THR A 87 17.470 17.994 59.795 1.00 17.65 C </line>
<line>ATOM 711 CA MET A 88 18.759 18.975 56.324 1.00 18.46 C </line>
<line>ATOM 719 CA HIS A 89 19.553 22.411 57.826 1.00 17.24 C </line>
<line>ATOM 729 CA HIS A 90 21.896 20.692 60.306 1.00 14.29 C </line>
</atom-coordinate>
<distance-map>
<line> HIS HIS MET THR ILE GLY ARG GLY GLN HIS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>HIS CA 11.98 14.65 12.58 10.69 7.62 8.44 5.80 6.40 3.80 </line>
<line>GLN CA 13.44 15.43 12.98 10.64 8.03 7.57 5.56 3.79 </line>
<line>GLY CA 13.65 15.55 13.69 10.53 7.75 5.53 3.81 </line>
<line>ARG CA 10.92 13.42 12.30 9.03 5.49 3.82 </line>
<line>GLY CA 9.23 10.90 10.01 6.28 3.79 </line>
<line>ILE CA 5.94 8.01 6.95 3.80 </line>
<line>THR CA 5.21 5.27 3.83 </line>
<line>MET CA 5.35 3.83 </line>
<line>HIS CA 3.82 </line>
<line>HIS CA </line>
</distance-map>
<n14>
<line>HIS CA 283</line>
<line>GLN CA 195</line>
<line>GLY CA 164</line>
<line>ARG CA 224</line>
<line>GLY CA 213</line>
<line>ILE CA 276</line>
<line>THR CA 227</line>
<line>MET CA 222</line>
<line>HIS CA 209</line>
<line>HIS CA 292</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1DLY</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1DLYA</entryIDChain>
<sequence>HKDLVPHLSDVH</sequence>
<secondary-structure>H HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 522 CA HIS A 68 -2.676 3.297 7.108 1.00 11.26 C </line>
<line>ATOM 532 CA LYS A 69 -4.505 1.611 4.228 1.00 15.34 C </line>
<line>ATOM 541 CA ASP A 70 -2.268 3.134 1.528 1.00 19.59 C </line>
<line>ATOM 549 CA LEU A 71 1.058 2.352 3.189 1.00 12.75 C </line>
<line>ATOM 557 CA VAL A 72 3.158 -0.163 1.256 1.00 18.21 C </line>
<line>ATOM 564 CA PRO A 73 3.939 -2.976 1.654 1.00 15.37 C </line>
<line>ATOM 571 CA HIS A 74 0.365 -3.426 2.909 1.00 12.66 C </line>
<line>ATOM 581 CA LEU A 75 0.448 -3.733 6.699 1.00 10.57 C </line>
<line>ATOM 589 CA SER A 76 0.193 -7.173 8.271 1.00 10.35 C </line>
<line>ATOM 595 CA ASP A 77 0.034 -8.610 11.752 1.00 9.40 C </line>
<line>ATOM 603 CA VAL A 78 3.843 -8.805 11.702 1.00 11.29 C </line>
<line>ATOM 610 CA HIS A 79 3.938 -4.992 11.673 1.00 10.46 C </line>
</atom-coordinate>
<distance-map>
<line> HIS VAL ASP SER LEU HIS PRO VAL LEU ASP LYS HIS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>HIS CA 11.55 14.49 13.06 10.92 7.70 8.49 10.62 8.96 5.49 5.60 3.81 </line>
<line>LYS CA 13.05 15.30 13.48 10.75 7.69 7.13 9.95 8.41 5.71 3.82 </line>
<line>ASP CA 14.40 16.83 15.74 12.56 9.02 7.20 8.71 6.35 3.80 </line>
<line>LEU CA 11.58 14.31 13.95 10.83 7.05 5.83 6.25 3.80 </line>
<line>VAL CA 11.51 13.57 13.83 10.35 7.05 4.60 2.95 </line>
<line>PRO CA 10.22 11.62 12.20 8.69 6.18 3.81 </line>
<line>HIS CA 9.59 10.88 10.26 6.54 3.80 </line>
<line>LEU CA 6.21 7.89 7.03 3.79 </line>
<line>SER CA 5.51 5.27 3.77 </line>
<line>ASP CA 5.32 3.81 </line>
<line>VAL CA 3.81 </line>
<line>HIS CA </line>
</distance-map>
<n14>
<line>HIS CA 321</line>
<line>LYS CA 235</line>
<line>ASP CA 195</line>
<line>LEU CA 243</line>
<line>VAL CA 201</line>
<line>PRO CA 187</line>
<line>HIS CA 226</line>
<line>LEU CA 285</line>
<line>SER CA 252</line>
<line>ASP CA 243</line>
<line>VAL CA 221</line>
<line>HIS CA 319</line>
</n14>
</entryChain>
<parallel>
<x>19.083999633789062</x>
<y>14.52400016784668</y>
<z>57.38600158691406</z>
</parallel>
<rotation>
<x>0.18000000715255737</x>
<y>0.7689999938011169</y>
<z>0.6129999756813049</z>
<x>0.5440000295639038</x>
<y>-0.597000002861023</y>
<z>0.5899999737739563</z>
<x>0.8190000057220459</x>
<y>0.22699999809265137</y>
<z>-0.5260000228881836</z>
</rotation>
<rmsd>1.4545810222625732</rmsd>
<dmax>2.7881178855895996</dmax>
</indel>