NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
3DLAB-3DLAD
confEVID 3DLAB-3DLAD
pdbIDA 3DLA
pdbIDB 3DLA
pdbChainA B
pdbChainB D
identity 0.977199971675873
indelSize 1
alignment <alignment>
<seq1>-MNFYSAYQHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIWENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGKNNAIKLARALGVTFSEIDIGDTARLMLHTIGHV----------TFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGEFGEKVGEVLQSVLDTEITSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKSERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARIWLDQIDREVPKG</seq1>
<seq2>SMNFYSAYQHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIWENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGEFGEKVGEVLQSVLDTE---EAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKSERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARIWLDQIDREVPKG</seq2>
<ss_1>- HHHH EEEEEEE HHHHHHHHHHHHHHH EEE GGGGG HHHHHHHHHHHHHHHHGGGG EEEEEEEEEE EEEEEEEEEE EEEEEEEE HHHH EEEEE EEEE EEEE EEEEEEEGGGG HHHHH EEEEE HHHHHHHHHHHHHHH EEEEEE EEEEEE EEEEEEEEEHHHHHHHHH HHHHHHHHH HHHHH EEE HHHHHHHHHHHHHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHH EEEEE HHHHHHHH EEE HHHHHHHHHH ---------- HHHHHHHHHHHHHHHHHHH EEEE HHHHH HHHHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHH HHHHHHHHHHHHHIIIII HHHHH HHHHHHHHHH </ss_1>
<ss_2> EEEEEEEEE HHHHHHHHHHHHHHH EEE GGGGG HHHHHHHHHHHHHHHHHGGG EEEEEEEEEE EEEEEEEEEE EEEEE HHHH EEE EEEE EEEE EEEEEEEGGG HHHHH EEEEE HHHHHHHHHHHHHHH EEEEEE EEEEEE EEEEEEEEEHHHHHHHHH HHHHHHHHH HHHHH EEEEE EEE HHHHHHHHHHHHHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHH EEEEE HHHHHHH EEE HHHHHHHHHH EE HHHHHHHHHHHHHHHHHHHHH EEEE HHHHH HHHHHHHHHHHHH HHHHHHHHHHHHH --- HHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHHIIIII HHHHH HHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3DLA</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>3DLAB</entryIDChain>
<sequence>VLDTE---EAKVG</sequence>
<secondary-structure>HHHH --- </secondary-structure>
<atom-coordinate>
<line>ATOM 19215 CA VAL D 537 157.432 117.696 56.127 1.00 11.14 C </line>
<line>ATOM 19222 CA LEU D 538 154.689 119.079 53.880 1.00 13.58 C </line>
<line>ATOM 19230 CA ASP D 539 157.191 121.227 51.967 1.00 17.38 C </line>
<line>ATOM 19238 CA THR D 540 159.871 118.555 51.311 1.00 20.43 C </line>
<line>ATOM 19245 CA GLU D 541 157.095 116.121 50.287 1.00 22.02 C </line>
<line>ATOM 19254 CA GLU D 558 155.266 105.632 42.626 1.00 23.06 C </line>
<line>ATOM 19259 CA ALA D 559 154.753 107.532 39.340 1.00 22.47 C </line>
<line>ATOM 19264 CA LYS D 560 154.123 104.101 37.736 1.00 21.04 C </line>
<line>ATOM 19273 CA VAL D 561 150.843 103.569 39.596 1.00 16.24 C </line>
<line>ATOM 19280 CA GLY D 562 149.802 107.064 38.415 1.00 11.95 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL LYS ALA GLU GLU THR ASP LEU VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 22.02 22.72 23.11 19.81 18.23 6.06 5.47 5.46 3.81 </line>
<line>LEU CA 20.18 21.43 22.03 18.57 17.54 5.24 5.81 3.81 </line>
<line>ASP CA 20.95 22.48 22.48 18.79 18.28 5.38 3.84 </line>
<line>THR CA 19.99 21.06 20.65 17.06 16.24 3.83 </line>
<line>GLU CA 16.62 17.63 17.63 14.11 13.12 </line>
<line>GLU CA 7.05 5.74 5.25 3.83 </line>
<line>ALA CA 5.06 5.57 3.84 </line>
<line>LYS CA 5.28 3.81 </line>
<line>VAL CA 3.83 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>VAL CA 313</line>
<line>LEU CA 313</line>
<line>ASP CA 226</line>
<line>THR CA 187</line>
<line>GLU CA 247</line>
<line>GLU CA 238</line>
<line>ALA CA 190</line>
<line>LYS CA 227</line>
<line>VAL CA 320</line>
<line>GLY CA 327</line>
</n14>
</entryChain>
<entryChain>
<pdbID>3DLA</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>3DLAB</entryIDChain>
<sequence>VLDTEITSEAKVG</sequence>
<secondary-structure>HHHHHH </secondary-structure>
<atom-coordinate>
<line>ATOM 8972 CA VAL B 537 116.095 157.719 63.914 1.00 10.24 C </line>
<line>ATOM 8979 CA LEU B 538 117.394 154.762 65.978 1.00 12.14 C </line>
<line>ATOM 8987 CA ASP B 539 119.286 156.855 68.551 1.00 15.30 C </line>
<line>ATOM 8995 CA THR B 540 116.458 159.405 68.812 1.00 17.35 C </line>
<line>ATOM 9002 CA GLU B 541 113.495 157.084 68.869 1.00 19.28 C </line>
<line>ATOM 9011 CA ILE B 542 114.888 154.360 71.193 1.00 21.69 C </line>
<line>ATOM 9019 CA THR B 543 116.384 156.944 73.583 1.00 23.20 C </line>
<line>ATOM 9026 CA SER B 557 104.813 157.003 74.662 1.00 34.27 C </line>
<line>ATOM 9032 CA GLU B 558 103.183 153.601 73.904 1.00 33.06 C </line>
<line>ATOM 9041 CA ALA B 559 104.430 151.527 76.863 1.00 30.58 C </line>
<line>ATOM 9046 CA LYS B 560 101.488 151.994 79.194 1.00 27.88 C </line>
<line>ATOM 9055 CA VAL B 561 100.135 149.096 77.215 1.00 22.13 C </line>
<line>ATOM 9062 CA GLY B 562 103.470 147.854 78.691 1.00 16.44 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL LYS ALA GLU SER THR ILE GLU THR ASP LEU VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 21.80 22.49 21.90 18.50 16.84 15.60 9.70 8.11 5.63 5.19 5.69 3.83 </line>
<line>LEU CA 20.08 21.36 20.86 17.23 16.31 15.45 7.98 5.80 5.38 5.52 3.82 </line>
<line>ASP CA 20.83 22.41 21.30 17.84 17.28 15.71 5.81 5.71 5.80 3.82 </line>
<line>THR CA 19.99 21.06 19.67 16.48 15.36 13.25 5.37 5.80 3.76 </line>
<line>GLU CA 16.80 17.66 16.63 13.30 11.99 10.44 5.53 3.84 </line>
<line>ILE CA 15.13 16.78 15.79 12.23 12.04 10.98 3.82 </line>
<line>THR CA 16.60 18.41 16.67 13.53 13.62 11.62 </line>
<line>SER CA 10.09 9.54 7.53 5.91 3.85 </line>
<line>GLU CA 7.49 6.37 5.78 3.82 </line>
<line>ALA CA 4.21 4.95 3.78 </line>
<line>LYS CA 4.62 3.76 </line>
<line>VAL CA 3.85 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>VAL CA 333</line>
<line>LEU CA 333</line>
<line>ASP CA 243</line>
<line>THR CA 217</line>
<line>GLU CA 280</line>
<line>ILE CA 300</line>
<line>THR CA 181</line>
<line>SER CA 195</line>
<line>GLU CA 284</line>
<line>ALA CA 272</line>
<line>LYS CA 231</line>
<line>VAL CA 324</line>
<line>GLY CA 344</line>
</n14>
</entryChain>
<parallel>
<x>0.0</x>
<y>0.0</y>
<z>0.0</z>
</parallel>
<rotation>
<x>1.0</x>
<y>-0.0</y>
<z>0.0</z>
<x>0.0</x>
<y>1.0</y>
<z>-0.0</z>
<x>-0.0</x>
<y>-0.0</y>
<z>1.0</z>
</rotation>
<rmsd>9.999999974752427E-7</rmsd>
<dmax>1.9999999949504854E-6</dmax>
</indel>