NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
3DLAD-3DLAC
confEVID 3DLAD-3DLAC
pdbIDA 3DLA
pdbIDB 3DLA
pdbChainA D
pdbChainB C
identity 0.993900001049042
indelSize 2
alignment <alignment>
<seq1>SMNFYSAYQHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIWENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGF-NNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGEFGEKVGEVLQSVLDTEEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKSERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARIWLDQIDREVPKG</seq1>
<seq2>SMNFYSAYQHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIWENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFKNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGEFGEKVGEVLQSVLDTEAK-VGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKSERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARIWLDQIDREVPKG</seq2>
<ss_1> EEEEEEEEE HHHHHHHHHHHHHHH EEE GGGGG HHHHHHHHHHHHHHHHHGGG EEEEEEEEEE EEEEEEEEEE EEEEE HHHH EEE EEEE EEEE EEEEEEEGGG HHHHH EEEEE HHHHHHHHHHHHHHH EEEEEE EEEEEE EEEEEEEEEHHHHHHHHH HHHHHHHHH HHHHH EEEEE EEE HHHHHHHHHHHHHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHH EEEEE - HHHHHHH EEE HHHHHHHHHH EE HHHHHHHHHHHHHHHHHHHHH EEEE HHHHH HHHHHHHHHHHHH HHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHHIIIII HHHHH HHHHHHHHHH </ss_1>
<ss_2> EEEEEEE HHHHHHHHHHHHHHH EEE GGGGG HHHHHHHHHHHHHHHH EEEEEEEEEE EEEEEEEEEE EEEEE HHHH EEEEE EEEE EEEE EEEEEEEGGGGG HHHHH EEEEE HHHHHHHHHHHHHHH EEEEEE EEEEEE EEEEEEEEEHHHHHHHHH HHHHHHHHH HHHHH EEE HHHHHHHHHHHHHHHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHH EEEEE HHHHHHHH EEE HHHHHHHHHH EE HHHHHHHHHHHHHHHHHHHHH EEEE HHHHH EEE EE HHHHHHHHHHH HHHHHHHHHHHHH - HHHHHHHHHHH HHHHHHHHHHHH HHHHHHHHHHHHHIIIII HHHHH HHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3DLA</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>3DLAD</entryIDChain>
<sequence>ALPGF-NNAIK</sequence>
<secondary-structure>E - HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 18205 CA ALA D 398 164.472 105.430 61.701 1.00 4.20 C </line>
<line>ATOM 18210 CA LEU D 399 165.564 102.410 59.681 1.00 5.05 C </line>
<line>ATOM 18218 CA PRO D 400 168.076 103.527 56.998 1.00 6.53 C </line>
<line>ATOM 18225 CA GLY D 401 168.666 101.079 54.082 1.00 9.22 C </line>
<line>ATOM 18229 CA PHE D 402 170.705 101.376 50.878 1.00 11.11 C </line>
<line>ATOM 18240 CA ASN D 410 166.139 114.958 59.086 1.00 17.73 C </line>
<line>ATOM 18248 CA ASN D 411 162.393 115.302 59.249 1.00 15.82 C </line>
<line>ATOM 18256 CA ALA D 412 161.736 112.130 61.251 1.00 13.81 C </line>
<line>ATOM 18261 CA ILE D 413 164.398 112.746 63.917 1.00 12.83 C </line>
<line>ATOM 18269 CA LYS D 414 163.388 116.422 64.328 1.00 12.09 C </line>
</atom-coordinate>
<distance-map>
<line> LYS ILE ALA ASN ASN PHE GLY PRO LEU ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 11.35 7.64 7.25 10.38 10.02 13.13 9.72 6.22 3.79 </line>
<line>LEU CA 14.92 11.23 10.56 13.28 12.58 10.25 6.54 3.84 </line>
<line>PRO CA 15.56 12.10 11.50 13.27 11.78 7.00 3.85 </line>
<line>GLY CA 19.19 15.84 14.88 16.38 14.97 3.81 </line>
<line>PHE CA 21.47 18.41 17.43 18.25 16.51 </line>
<line>ASN CA 6.10 5.59 5.66 3.77 </line>
<line>ASN CA 5.30 5.69 3.81 </line>
<line>ALA CA 5.53 3.82 </line>
<line>ILE CA 3.83 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ALA CA 350</line>
<line>LEU CA 338</line>
<line>PRO CA 277</line>
<line>GLY CA 283</line>
<line>PHE CA 258</line>
<line>ASN CA 229</line>
<line>ASN CA 307</line>
<line>ALA CA 364</line>
<line>ILE CA 303</line>
<line>LYS CA 291</line>
</n14>
</entryChain>
<entryChain>
<pdbID>3DLA</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>3DLAD</entryIDChain>
<sequence>ALPGFKNNAIK</sequence>
<secondary-structure>E HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 13107 CA ALA C 398 72.003 165.252 59.523 1.00 4.57 C </line>
<line>ATOM 13112 CA LEU C 399 75.283 166.107 57.789 1.00 6.58 C </line>
<line>ATOM 13120 CA PRO C 400 74.555 168.498 54.955 1.00 8.42 C </line>
<line>ATOM 13127 CA GLY C 401 77.292 169.674 52.569 1.00 11.54 C </line>
<line>ATOM 13131 CA PHE C 402 77.332 171.841 49.413 1.00 13.71 C </line>
<line>ATOM 13142 CA LYS C 409 66.015 165.292 54.077 1.00 21.05 C </line>
<line>ATOM 13151 CA ASN C 410 63.098 166.899 55.906 1.00 18.93 C </line>
<line>ATOM 13156 CA ASN C 411 62.233 163.162 56.013 1.00 15.96 C </line>
<line>ATOM 13164 CA ALA C 412 65.284 162.598 58.195 1.00 13.70 C </line>
<line>ATOM 13169 CA ILE C 413 64.319 165.157 60.877 1.00 12.45 C </line>
<line>ATOM 13177 CA LYS C 414 60.682 164.061 60.697 1.00 10.73 C </line>
</atom-coordinate>
<distance-map>
<line> LYS ILE ALA ASN ASN LYS PHE GLY PRO LEU ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 11.44 7.80 7.35 10.59 9.75 8.09 13.19 9.79 6.16 3.81 </line>
<line>LEU CA 15.03 11.43 10.60 13.50 12.36 10.02 10.36 6.63 3.78 </line>
<line>PRO CA 15.66 12.29 11.46 13.47 11.61 9.16 7.04 3.82 </line>
<line>GLY CA 19.33 16.05 15.03 16.76 14.84 12.19 3.83 </line>
<line>PHE CA 21.57 18.59 17.54 18.62 16.41 13.88 </line>
<line>LYS CA 8.59 7.01 4.97 4.75 3.80 </line>
<line>ASN CA 6.07 5.41 5.34 3.84 </line>
<line>ASN CA 5.02 5.66 3.79 </line>
<line>ALA CA 5.44 3.83 </line>
<line>ILE CA 3.80 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ALA CA 354</line>
<line>LEU CA 352</line>
<line>PRO CA 287</line>
<line>GLY CA 284</line>
<line>PHE CA 259</line>
<line>LYS CA 269</line>
<line>ASN CA 236</line>
<line>ASN CA 305</line>
<line>ALA CA 361</line>
<line>ILE CA 300</line>
<line>LYS CA 286</line>
</n14>
</entryChain>
<parallel>
<x>0.0</x>
<y>0.0</y>
<z>0.0</z>
</parallel>
<rotation>
<x>1.0</x>
<y>0.0</y>
<z>-0.0</z>
<x>0.0</x>
<y>1.0</y>
<z>-0.0</z>
<x>-0.0</x>
<y>-0.0</y>
<z>1.0</z>
</rotation>
<rmsd>9.999999974752427E-7</rmsd>
<dmax>1.9999999949504854E-6</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>3DLA</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>3DLAD</entryIDChain>
<sequence>DTEAK-VGPFA</sequence>
<secondary-structure>HH - H</secondary-structure>
<atom-coordinate>
<line>ATOM 14135 CA ASP C 539 57.488 157.795 47.809 1.00 16.96 C </line>
<line>ATOM 14143 CA THR C 540 60.453 160.188 47.565 1.00 19.38 C </line>
<line>ATOM 14150 CA GLU C 541 62.833 157.453 46.324 1.00 21.73 C </line>
<line>ATOM 14159 CA ALA C 559 73.357 154.484 39.582 1.00 19.49 C </line>
<line>ATOM 14164 CA LYS C 560 75.209 154.790 36.296 1.00 19.69 C </line>
<line>ATOM 14173 CA VAL C 561 76.731 151.597 37.669 1.00 15.25 C </line>
<line>ATOM 14180 CA GLY C 562 73.416 150.414 36.099 1.00 10.37 C </line>
<line>ATOM 14184 CA PRO C 563 70.014 149.332 37.471 1.00 6.51 C </line>
<line>ATOM 14191 CA PHE C 564 70.426 147.596 40.850 1.00 6.56 C </line>
<line>ATOM 14202 CA ALA C 565 67.705 145.156 39.782 1.00 6.91 C </line>
</atom-coordinate>
<distance-map>
<line> ALA PHE PRO GLY VAL LYS ALA GLU THR ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 18.13 17.88 18.31 21.10 22.62 21.35 18.18 5.56 3.82 </line>
<line>THR CA 18.42 17.41 17.64 19.88 20.90 19.34 16.21 3.83 </line>
<line>GLU CA 14.76 13.59 14.00 16.31 17.39 16.15 12.85 </line>
<line>ALA CA 10.91 7.59 6.49 5.36 4.84 3.78 </line>
<line>LYS CA 12.70 9.77 7.63 4.73 3.79 </line>
<line>VAL CA 11.29 8.12 7.09 3.85 </line>
<line>GLY CA 8.59 6.28 3.82 </line>
<line>PRO CA 5.30 3.82 </line>
<line>PHE CA 3.81 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ASP CA 231</line>
<line>THR CA 202</line>
<line>GLU CA 263</line>
<line>ALA CA 246</line>
<line>LYS CA 212</line>
<line>VAL CA 312</line>
<line>GLY CA 327</line>
<line>PRO CA 388</line>
<line>PHE CA 463</line>
<line>ALA CA 507</line>
</n14>
</entryChain>
<entryChain>
<pdbID>3DLA</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>3DLAD</entryIDChain>
<sequence>DTEEAKVGPFA</sequence>
<secondary-structure>HH H</secondary-structure>
<atom-coordinate>
<line>ATOM 19230 CA ASP D 539 157.191 121.227 51.967 1.00 17.38 C </line>
<line>ATOM 19238 CA THR D 540 159.871 118.555 51.311 1.00 20.43 C </line>
<line>ATOM 19245 CA GLU D 541 157.095 116.121 50.287 1.00 22.02 C </line>
<line>ATOM 19254 CA GLU D 558 155.266 105.632 42.626 1.00 23.06 C </line>
<line>ATOM 19259 CA ALA D 559 154.753 107.532 39.340 1.00 22.47 C </line>
<line>ATOM 19264 CA LYS D 560 154.123 104.101 37.736 1.00 21.04 C </line>
<line>ATOM 19273 CA VAL D 561 150.843 103.569 39.596 1.00 16.24 C </line>
<line>ATOM 19280 CA GLY D 562 149.802 107.064 38.415 1.00 11.95 C </line>
<line>ATOM 19284 CA PRO D 563 148.742 110.245 40.256 1.00 9.62 C </line>
<line>ATOM 19291 CA PHE D 564 147.055 109.356 43.545 1.00 9.02 C </line>
<line>ATOM 19302 CA ALA D 565 144.558 112.143 42.751 1.00 6.34 C </line>
</atom-coordinate>
<distance-map>
<line> ALA PHE PRO GLY VAL LYS ALA GLU GLU THR ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 18.08 17.74 18.14 20.95 22.48 22.48 18.79 18.28 5.38 3.84 </line>
<line>THR CA 18.68 17.58 17.75 19.99 21.06 20.65 17.06 16.24 3.83 </line>
<line>GLU CA 15.16 13.86 14.32 16.62 17.63 17.63 14.11 13.12 </line>
<line>GLU CA 12.53 9.06 8.33 7.05 5.74 5.25 3.83 </line>
<line>ALA CA 11.70 8.96 6.66 5.06 5.57 3.84 </line>
<line>LYS CA 13.47 10.55 8.55 5.28 3.81 </line>
<line>VAL CA 11.09 7.96 7.03 3.83 </line>
<line>GLY CA 8.49 6.25 3.83 </line>
<line>PRO CA 5.23 3.80 </line>
<line>PHE CA 3.83 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ASP CA 226</line>
<line>THR CA 187</line>
<line>GLU CA 247</line>
<line>GLU CA 238</line>
<line>ALA CA 190</line>
<line>LYS CA 227</line>
<line>VAL CA 320</line>
<line>GLY CA 327</line>
<line>PRO CA 390</line>
<line>PHE CA 468</line>
<line>ALA CA 510</line>
</n14>
</entryChain>
<parallel>
<x>0.0</x>
<y>0.0</y>
<z>0.0</z>
</parallel>
<rotation>
<x>1.0</x>
<y>-0.0</y>
<z>-0.0</z>
<x>0.0</x>
<y>1.0</y>
<z>-0.0</z>
<x>-0.0</x>
<y>0.0</y>
<z>1.0</z>
</rotation>
<rmsd>9.999999974752427E-7</rmsd>
<dmax>1.9999999949504854E-6</dmax>
</indel>