NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
3DLSB-3DLSF
confEVID 3DLSB-3DLSF
pdbIDA 3DLS
pdbIDB 3DLS
pdbChainA B
pdbChainB F
identity 0.992900013923645
indelSize 1
alignment <alignment>
<seq1>AVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKE--WIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFR</seq1>
<seq2>AVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVF-</seq2>
<ss_1> HHHHH HHHHEEE EEEEEEE EEEEEEEEE -- EEE EEE HHHHHH EEE EEEEEEEEEE HHHHHH HHHHHHHHHHHHHHHHHHHH EEE GGEEEEE EEEE GGG HHHH HHHHHHHHHHHHHHH GGG HHHHHHHHHH HHHHH HHHH GGG HHHH </ss_1>
<ss_2> HHHHH HHHEEE EEEEEE EEEEEEEEE EEE EEE HHHHHHHH EEEEEEEEEEEEEE EEHHHHHH HHHHHHHHHHHHHHHHHHHH EEE GGEEEEE EEEE GGG HHHHHHHHHHHHHHH GGGG HHHHHHHHHH HHHHH HHHH GGG HHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3DLS</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>3DLSB</entryIDChain>
<sequence>FIKKE--WIEDP</sequence>
<secondary-structure>EEE -- EEE </secondary-structure>
<atom-coordinate>
<line>ATOM 2588 CA PHE B1029 9.993 -12.850 11.202 1.00 27.19 C </line>
<line>ATOM 2599 CA ILE B1030 10.015 -10.009 13.718 1.00 31.47 C </line>
<line>ATOM 2607 CA LYS B1031 12.970 -9.584 16.099 1.00 39.63 C </line>
<line>ATOM 2612 CA LYS B1032 12.749 -7.509 19.302 1.00 54.02 C </line>
<line>ATOM 2621 CA GLU B1033 15.471 -5.121 18.113 1.00 62.72 C </line>
<line>ATOM 2626 CA TRP B1040 5.074 -2.134 22.778 1.00 66.69 C </line>
<line>ATOM 2631 CA ILE B1041 1.304 -2.798 22.701 1.00 63.56 C </line>
<line>ATOM 2639 CA GLU B1042 -0.906 -4.562 25.258 1.00 67.25 C </line>
<line>ATOM 2648 CA ASP B1043 -3.601 -6.192 23.115 1.00 69.01 C </line>
<line>ATOM 2656 CA PRO B1044 -6.176 -7.818 25.484 1.00 70.66 C </line>
</atom-coordinate>
<distance-map>
<line> PRO ASP GLU ILE TRP GLU LYS LYS ILE PHE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>PHE CA 22.15 19.26 19.62 17.57 16.52 11.73 10.09 6.60 3.79 </line>
<line>ILE CA 20.13 16.98 16.80 14.44 12.98 8.54 6.70 3.82 </line>
<line>LYS CA 21.40 18.31 17.37 15.02 12.75 5.50 3.82 </line>
<line>LYS CA 19.91 16.84 15.19 12.83 9.99 3.81 </line>
<line>GLU CA 23.03 19.75 17.88 15.07 11.78 </line>
<line>TRP CA 12.89 9.58 6.91 3.83 </line>
<line>ILE CA 9.43 5.98 3.81 </line>
<line>GLU CA 6.20 3.81 </line>
<line>ASP CA 3.86 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>PHE CA 422</line>
<line>ILE CA 343</line>
<line>LYS CA 270</line>
<line>LYS CA 209</line>
<line>GLU CA 151</line>
<line>TRP CA 193</line>
<line>ILE CA 205</line>
<line>GLU CA 158</line>
<line>ASP CA 177</line>
<line>PRO CA 133</line>
</n14>
</entryChain>
<entryChain>
<pdbID>3DLS</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>3DLSB</entryIDChain>
<sequence>FIKKEKVWIEDP</sequence>
<secondary-structure>EEE EEE </secondary-structure>
<atom-coordinate>
<line>ATOM 11438 CA PHE F1029 78.928 12.202 34.510 1.00 40.24 C </line>
<line>ATOM 11449 CA ILE F1030 78.047 9.451 32.051 1.00 45.26 C </line>
<line>ATOM 11457 CA LYS F1031 80.932 8.181 29.902 1.00 54.62 C </line>
<line>ATOM 11462 CA LYS F1032 80.003 6.797 26.471 1.00 61.21 C </line>
<line>ATOM 11471 CA GLU F1033 81.973 3.689 27.468 1.00 65.33 C </line>
<line>ATOM 11476 CA LYS F1034 79.373 1.916 29.608 1.00 61.17 C </line>
<line>ATOM 11481 CA VAL F1035 76.756 2.371 26.862 1.00 65.97 C </line>
<line>ATOM 11486 CA TRP F1040 70.878 3.043 23.820 1.00 69.69 C </line>
<line>ATOM 11491 CA ILE F1041 67.487 4.661 23.237 1.00 71.87 C </line>
<line>ATOM 11499 CA GLU F1042 66.481 7.012 20.410 1.00 73.81 C </line>
<line>ATOM 11508 CA ASP F1043 64.244 9.504 22.211 1.00 71.90 C </line>
<line>ATOM 11516 CA PRO F1044 62.242 11.909 19.986 1.00 70.46 C </line>
</atom-coordinate>
<distance-map>
<line> PRO ASP GLU ILE TRP VAL LYS GLU LYS LYS ILE PHE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>PHE CA 22.12 19.34 19.51 17.74 16.22 12.64 11.40 11.46 9.75 6.44 3.79 </line>
<line>ILE CA 20.04 16.95 16.59 14.57 12.66 8.87 8.03 8.34 6.48 3.82 </line>
<line>LYS CA 21.48 18.42 17.33 15.41 12.82 7.77 6.46 5.21 3.81 </line>
<line>LYS CA 19.59 16.55 14.82 13.10 10.22 5.50 5.84 3.81 </line>
<line>GLU CA 22.65 19.38 17.35 15.12 11.70 5.41 3.81 </line>
<line>LYS CA 22.04 18.47 16.64 13.76 10.34 3.82 </line>
<line>VAL CA 18.68 15.13 12.99 10.21 6.65 </line>
<line>TRP CA 12.96 9.40 6.83 3.80 </line>
<line>ILE CA 9.52 5.92 3.81 </line>
<line>GLU CA 6.49 3.80 </line>
<line>ASP CA 3.84 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>PHE CA 430</line>
<line>ILE CA 359</line>
<line>LYS CA 288</line>
<line>LYS CA 234</line>
<line>GLU CA 172</line>
<line>LYS CA 177</line>
<line>VAL CA 193</line>
<line>TRP CA 217</line>
<line>ILE CA 210</line>
<line>GLU CA 158</line>
<line>ASP CA 169</line>
<line>PRO CA 131</line>
</n14>
</entryChain>
<parallel>
<x>0.0</x>
<y>0.0</y>
<z>0.0</z>
</parallel>
<rotation>
<x>1.0</x>
<y>-0.0</y>
<z>-0.0</z>
<x>-0.0</x>
<y>1.0</y>
<z>-0.0</z>
<x>-0.0</x>
<y>-0.0</y>
<z>1.0</z>
</rotation>
<rmsd>9.999999974752427E-7</rmsd>
<dmax>1.9999999949504854E-6</dmax>
</indel>