NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1DXIA-5XIAB
confEVID 1DXIA-5XIAB
pdbIDA 1DXI
pdbIDB 5XIA
pdbChainA A
pdbChainB B
identity 0.636099994182587
indelSize 1
alignment <alignment>
<seq1>MSFQPTPEDRFTFGLWTVGWQGRDPFGDATRPALDPVETVQRLAELGAYGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIGNIDLAAELGAKTYVAWGGREGAESGGAKDVRDALDRMKEAFDLLGEYVTAQGYDLRFAIEPKPNEPRGDILLPTVGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKLFHIDLNGQSGIKYDQDLRFGAGDLRAAFWLVDLLET------AGYEGPRHFDFKPPRTEDFDGVWASAAGCMRNYLILKDRAAAFRADPEVQEALRAARLDQLAQPTAAD--GLDALLADRAAFEDFDVDAAAARGMAFEHLDQLAMDHLLGARG</seq1>
<seq2>--VQPTPADHFTFGLWTVGWTGADPFGVATRANLDPVEAVHKLAELGAYGITFHDNDLIPFDATAAEREKILGDFNQALADTGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEKLFHIDLNGQRGIKYDQDLVFGHGDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMYLLLKERALAFRADPEVQEAMKTSGVFELGETTLNAGESAADLMNDSASFAGFDAEAAAERNFAFIRLNQLAIEHLLGSR-</seq2>
<ss_1> EEEEHHHH HHHHHHHH EEEEE HHHHHHHHHHHHHHHH EE HHHHHHHHHHHHHHHHHHH EEE EEE HHHHHHHHHHHHHHHHHHHHH EE HHHHHHHHHHH HHHH HHHHHHHH EEEE HHHHHHHHHHHHH------ EEE HHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHH HHHH -- HHHHH HHHHHHH </ss_1>
<ss_2>-- EEEEHHHH HHHHHHHHHH EEEEEHHHH HHHHHHHHHHHHHHHHHH EEE HHHHHHHHHHHHHHHHHHHH EEEEEE EEE HHHHHHHHHHHHHHHHHHHHH EEEE HHHHHHGGGG GGG EE HHHHH HHHHHHHHHH EEEE HHHHHHHHHHH EEE HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHH GGG HHHHH HHHH HHHGGG HHHHHHHHHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1DXI</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1DXIA</entryIDChain>
<sequence>PTAAD--GLDAL</sequence>
<secondary-structure> -- </secondary-structure>
<atom-coordinate>
<line>ATOM 2673 CA PRO A 341 26.713 63.584 21.723 1.00 14.84 C </line>
<line>ATOM 2680 CA THR A 342 23.569 63.377 19.625 1.00 15.98 C </line>
<line>ATOM 2687 CA ALA A 343 21.218 64.519 22.357 1.00 17.66 C </line>
<line>ATOM 2692 CA ALA A 344 23.102 65.750 25.409 1.00 20.71 C </line>
<line>ATOM 2697 CA ASP A 345 21.639 66.747 28.815 1.00 24.28 C </line>
<line>ATOM 2705 CA GLY A 346 19.152 64.165 30.181 1.00 26.46 C </line>
<line>ATOM 2709 CA LEU A 347 17.774 64.652 26.919 1.00 26.55 C </line>
<line>ATOM 2717 CA ASP A 348 15.020 62.637 25.375 1.00 23.58 C </line>
<line>ATOM 2725 CA ALA A 349 13.228 65.983 25.181 1.00 22.80 C </line>
<line>ATOM 2730 CA LEU A 350 14.764 66.207 21.861 1.00 20.90 C </line>
</atom-coordinate>
<distance-map>
<line> LEU ALA ASP LEU GLY ASP ALA ALA THR PRO </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>PRO CA 12.23 14.13 12.29 10.39 11.36 9.28 5.60 5.61 3.79 </line>
<line>THR CA 9.52 12.02 10.33 9.40 11.47 9.98 6.27 3.78 </line>
<line>ALA CA 6.69 8.60 7.15 5.72 8.10 6.84 3.79 </line>
<line>ALA CA 9.07 9.88 8.66 5.65 6.39 3.84 </line>
<line>ASP CA 9.79 9.19 8.52 4.79 3.84 </line>
<line>GLY CA 9.63 7.96 6.52 3.57 </line>
<line>LEU CA 6.09 5.05 3.75 </line>
<line>ASP CA 5.02 3.80 </line>
<line>ALA CA 3.66 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>PRO CA 118</line>
<line>THR CA 149</line>
<line>ALA CA 136</line>
<line>ALA CA 110</line>
<line>ASP CA 86</line>
<line>GLY CA 79</line>
<line>LEU CA 94</line>
<line>ASP CA 102</line>
<line>ALA CA 113</line>
<line>LEU CA 143</line>
</n14>
</entryChain>
<entryChain>
<pdbID>5XIA</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>5XIAB</entryIDChain>
<sequence>TTLNAGESAADL</sequence>
<secondary-structure> HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 5692 CA THR B 346 7.309 39.398 19.216 1.00 24.08 C </line>
<line>ATOM 5699 CA THR B 347 5.105 42.066 17.676 1.00 24.82 C </line>
<line>ATOM 5706 CA LEU B 348 2.017 39.771 17.479 1.00 26.18 C </line>
<line>ATOM 5714 CA ASN B 349 0.444 37.844 20.424 1.00 30.99 C </line>
<line>ATOM 5722 CA ALA B 350 0.783 34.018 20.588 1.00 34.01 C </line>
<line>ATOM 5727 CA GLY B 351 -1.966 32.949 18.205 1.00 35.46 C </line>
<line>ATOM 5731 CA GLU B 352 -2.747 36.513 16.977 1.00 34.38 C </line>
<line>ATOM 5740 CA SER B 353 -3.385 36.572 13.232 1.00 31.85 C </line>
<line>ATOM 5746 CA ALA B 354 -2.990 39.512 10.798 1.00 33.53 C </line>
<line>ATOM 5751 CA ALA B 355 -6.830 39.772 10.662 1.00 35.59 C </line>
<line>ATOM 5756 CA ASP B 356 -6.824 39.868 14.478 1.00 39.07 C </line>
<line>ATOM 5764 CA LEU B 357 -4.216 42.693 14.676 1.00 40.35 C </line>
</atom-coordinate>
<distance-map>
<line> LEU ASP ALA ALA SER GLU GLY ALA ASN LEU THR THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 12.82 14.91 16.53 13.30 12.58 10.70 11.34 8.57 7.14 5.58 3.79 </line>
<line>THR CA 9.81 12.54 14.03 10.93 11.05 9.64 11.55 9.59 6.86 3.85 </line>
<line>LEU CA 7.43 9.34 11.17 8.35 7.58 5.79 7.93 6.65 3.85 </line>
<line>ASN CA 8.85 9.61 12.33 10.36 8.25 4.88 5.89 3.84 </line>
<line>ALA CA 11.63 11.38 13.77 11.84 8.83 5.63 3.79 </line>
<line>GLY CA 10.60 9.24 11.27 9.95 6.31 3.85 </line>
<line>GLU CA 6.76 5.84 8.20 6.87 3.80 </line>
<line>SER CA 6.34 4.92 5.36 3.84 </line>
<line>ALA CA 5.16 5.33 3.85 </line>
<line>ALA CA 5.61 3.82 </line>
<line>ASP CA 3.85 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>THR CA 125</line>
<line>THR CA 157</line>
<line>LEU CA 149</line>
<line>ASN CA 131</line>
<line>ALA CA 95</line>
<line>GLY CA 93</line>
<line>GLU CA 118</line>
<line>SER CA 112</line>
<line>ALA CA 124</line>
<line>ALA CA 119</line>
<line>ASP CA 130</line>
<line>LEU CA 150</line>
</n14>
</entryChain>
<parallel>
<x>20.716999053955078</x>
<y>25.809999465942383</y>
<z>8.791000366210938</z>
</parallel>
<rotation>
<x>0.7850000262260437</x>
<y>-0.5040000081062317</y>
<z>-0.36000001430511475</z>
<x>-0.3889999985694885</x>
<y>0.05000000074505806</y>
<z>-0.9200000166893005</z>
<x>0.4819999933242798</x>
<y>0.8619999885559082</y>
<z>-0.15700000524520874</z>
</rotation>
<rmsd>2.6594600677490234</rmsd>
<dmax>4.02338981628418</dmax>
</indel>