NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1DXIB-1XLDA
confEVID 1DXIB-1XLDA
pdbIDA 1DXI
pdbIDB 1XLD
pdbChainA B
pdbChainB A
identity 0.638700008392334
indelSize 1
alignment <alignment>
<seq1>MSFQPTPEDRFTFGLWTVGWQGRDPFGDATRPALDPVETVQRLAELGAYGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIGNIDLAAELGAKTYVAWGGREGAESGGAKDVRDALDRMKEAFDLLGEYVTAQGYDLRFAIEPKPNEPRGDILLPTVGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKLFHIDLNGQSGIKYDQDLRFGAGDLRAAFWLVDLLET------AGYEGPRHFDFKPPRTEDFDGVWASAAGCMRNYLILKDRAAAFRADPEVQEALRAARLDQLAQPTAADGLD--ALLADRAAFEDFDVDAAAARGMAFEHLDQLAMDHLLGARG</seq1>
<seq2>--VQPTPADHFTFGLWTVGWTGADPFGVATRKNLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEKLFHIDLNGQRGIKYDQDLVFGHGDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMYLLLKERALAFRADPEVQEAMKTSGVFELGETTLNAGESAADLMNDSASFAGFDAEAAAERNFAFIRLNQLAIEHLLGSR-</seq2>
<ss_1> EEEEHHHH HHHHHHHH EEEEEHHHH HHHHHHHHHHHHHHHHH EEE HHHHHHHHHHHHHHHHHHHH EEE EEE HHHHHHHHHHHHHHHHHHHHH EEE HHHHHHGGGG EE HHHHH HHHHHHHHH EEE HHHHHHHHHHHHH------ EEE HHHHHHHHHHHHHHHHHHHHH HHHH HHHH HHHH -- HHHHHH HHHHHHH </ss_1>
<ss_2>-- EEEEHHHH HHHHHHHHHH EEEEEHHHH HHHHHHHHHHHHHHHHHH EE HHHHHHHHHHHHHHHHHHHH EEEEEE EEE GGG HHHHHHHHHHHHHHHHHHHHH EEEE HHHHHHHGGG GGG EE HHHHH HHHHHHHHHH EEEE HHHHHHHHHHHHH EEE HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHH GGG HHHHHH HHHGGG HHHHHHHHHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1DXI</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1DXIB</entryIDChain>
<sequence>ADGLD--ALLAD</sequence>
<secondary-structure> -- </secondary-structure>
<atom-coordinate>
<line>ATOM 5716 CA ALA B 344 30.710 18.941 38.689 1.00 30.59 C </line>
<line>ATOM 5721 CA ASP B 345 29.767 19.365 42.331 1.00 37.95 C </line>
<line>ATOM 5729 CA GLY B 346 32.114 20.875 44.819 1.00 37.49 C </line>
<line>ATOM 5733 CA LEU B 347 34.761 20.151 42.210 1.00 31.64 C </line>
<line>ATOM 5741 CA ASP B 348 37.800 21.926 40.936 1.00 24.63 C </line>
<line>ATOM 5749 CA ALA B 349 39.198 18.529 42.027 1.00 25.16 C </line>
<line>ATOM 5754 CA LEU B 350 40.162 17.010 38.793 1.00 23.04 C </line>
<line>ATOM 5762 CA LEU B 351 43.286 18.711 40.130 1.00 22.38 C </line>
<line>ATOM 5770 CA ALA B 352 43.638 15.793 42.551 1.00 26.27 C </line>
<line>ATOM 5775 CA ASP B 353 42.570 13.059 40.106 1.00 28.03 C </line>
</atom-coordinate>
<distance-map>
<line> ASP ALA LEU LEU ALA ASP LEU GLY ASP ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 13.31 13.85 12.66 9.65 9.13 8.01 5.50 6.58 3.79 </line>
<line>ASP CA 14.44 14.33 13.71 11.23 9.47 8.55 5.06 3.74 </line>
<line>GLY CA 13.88 12.80 12.31 10.77 7.97 6.97 3.79 </line>
<line>LEU CA 10.76 9.89 8.89 7.12 4.73 3.74 </line>
<line>ASP CA 10.10 8.62 6.41 5.86 3.83 </line>
<line>ALA CA 6.71 5.24 4.51 3.70 </line>
<line>LEU CA 4.81 5.26 3.80 </line>
<line>LEU CA 5.70 3.81 </line>
<line>ALA CA 3.82 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>ALA CA 106</line>
<line>ASP CA 83</line>
<line>GLY CA 81</line>
<line>LEU CA 91</line>
<line>ASP CA 102</line>
<line>ALA CA 116</line>
<line>LEU CA 146</line>
<line>LEU CA 130</line>
<line>ALA CA 122</line>
<line>ASP CA 133</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1XLD</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1XLDA</entryIDChain>
<sequence>NAGESAADLMND</sequence>
<secondary-structure> HHHHHH </secondary-structure>
<atom-coordinate>
<line>ATOM 2686 CA ASN A 349 72.676 73.169 7.492 1.00 31.04 C </line>
<line>ATOM 2694 CA ALA A 350 72.870 76.843 8.495 1.00 35.21 C </line>
<line>ATOM 2699 CA GLY A 351 73.862 78.769 5.408 1.00 37.86 C </line>
<line>ATOM 2703 CA GLU A 352 74.040 75.570 3.212 1.00 35.35 C </line>
<line>ATOM 2712 CA SER A 353 72.689 76.439 -0.251 1.00 34.01 C </line>
<line>ATOM 2718 CA ALA A 354 71.119 74.245 -2.960 1.00 32.67 C </line>
<line>ATOM 2723 CA ALA A 355 74.437 74.013 -4.871 1.00 34.76 C </line>
<line>ATOM 2728 CA ASP A 356 76.318 73.141 -1.638 1.00 37.76 C </line>
<line>ATOM 2736 CA LEU A 357 73.921 70.220 -1.062 1.00 38.48 C </line>
<line>ATOM 2744 CA MET A 358 73.912 68.767 -4.639 1.00 40.25 C </line>
<line>ATOM 2752 CA ASN A 359 77.754 68.868 -4.691 1.00 46.77 C </line>
<line>ATOM 2760 CA ASP A 360 77.919 67.478 -1.065 1.00 46.84 C </line>
</atom-coordinate>
<distance-map>
<line> ASP ASN MET LEU ASP ALA ALA SER GLU GLY ALA ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 11.54 13.88 12.96 9.13 9.83 12.52 10.62 8.41 5.09 6.09 3.81 </line>
<line>ALA CA 14.30 16.17 15.45 11.67 11.33 13.75 11.88 8.76 5.56 3.77 </line>
<line>GLY CA 13.63 14.67 14.18 10.72 9.35 11.34 9.90 6.23 3.88 </line>
<line>GLU CA 9.94 11.01 10.39 6.85 5.88 8.24 6.96 3.82 </line>
<line>SER CA 10.41 10.13 8.92 6.39 5.10 5.50 3.82 </line>
<line>ALA CA 9.78 8.71 6.37 5.26 5.48 3.84 </line>
<line>ALA CA 8.33 6.12 5.28 5.40 3.84 </line>
<line>ASP CA 5.91 5.44 5.82 3.82 </line>
<line>LEU CA 4.85 5.45 3.86 </line>
<line>MET CA 5.52 3.84 </line>
<line>ASN CA 3.89 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>ASN CA 129</line>
<line>ALA CA 94</line>
<line>GLY CA 89</line>
<line>GLU CA 121</line>
<line>SER CA 112</line>
<line>ALA CA 124</line>
<line>ALA CA 121</line>
<line>ASP CA 129</line>
<line>LEU CA 149</line>
<line>MET CA 137</line>
<line>ASN CA 128</line>
<line>ASP CA 141</line>
</n14>
</entryChain>
<parallel>
<x>-37.81100082397461</x>
<y>-54.67599868774414</y>
<z>39.1150016784668</z>
</parallel>
<rotation>
<x>0.13099999725818634</x>
<y>-0.7110000252723694</y>
<z>0.6909999847412109</z>
<x>-0.2919999957084656</x>
<y>0.6380000114440918</y>
<z>0.7129999995231628</z>
<x>-0.9480000138282776</x>
<y>-0.29499998688697815</y>
<z>-0.12399999797344208</z>
</rotation>
<rmsd>1.2531880140304565</rmsd>
<dmax>2.052288055419922</dmax>
</indel>