NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1DXUC-2ZLWD
confEVID 1DXUC-2ZLWD
pdbIDA 1DXU
pdbIDB 2ZLW
pdbChainA C
pdbChainB D
identity 0.42179998755455
indelSize 1
alignment <alignment>
<seq1>-VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHHH HHHH HHHHHHHH HHHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHH --HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>WDKVN--EEEVG</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
<line>ATOM 3444 CA GLY D 24 -32.072 6.515 32.744 1.00 15.19 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU GLU GLU ASN VAL LYS ASP TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.84 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 14.65 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 13.34 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 9.66 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 8.13 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.62 5.30 5.54 3.81 </line>
<line>GLU CA 5.13 5.65 3.79 </line>
<line>GLU CA 5.54 3.81 </line>
<line>VAL CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1DXU</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1DXUC</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2288 CA TRP C 14 -21.753 14.606 7.331 1.00 17.29 C </line>
<line>ATOM 2302 CA GLY C 15 -24.730 16.829 8.102 1.00 22.86 C </line>
<line>ATOM 2306 CA LYS C 16 -26.973 13.763 7.796 1.00 26.34 C </line>
<line>ATOM 2315 CA VAL C 17 -24.659 11.815 10.140 1.00 24.63 C </line>
<line>ATOM 2322 CA GLY C 18 -25.443 14.487 12.687 1.00 27.72 C </line>
<line>ATOM 2326 CA ALA C 19 -25.775 13.134 16.192 1.00 25.42 C </line>
<line>ATOM 2331 CA HIS C 20 -24.963 9.567 15.159 1.00 24.39 C </line>
<line>ATOM 2341 CA ALA C 21 -21.337 10.503 14.391 1.00 20.66 C </line>
<line>ATOM 2346 CA GLY C 22 -20.036 8.896 17.616 1.00 17.37 C </line>
<line>ATOM 2350 CA GLU C 23 -21.940 5.624 17.063 1.00 17.56 C </line>
<line>ATOM 2359 CA TYR C 24 -20.627 5.469 13.491 1.00 13.84 C </line>
<line>ATOM 2371 CA GLY C 25 -17.040 6.149 14.622 1.00 9.45 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.12 11.08 13.24 11.89 8.18 9.85 9.84 6.51 4.91 5.31 3.79 </line>
<line>GLY CA 14.69 13.23 14.62 13.25 9.54 10.13 8.96 5.20 5.41 3.81 </line>
<line>LYS CA 14.26 11.90 13.32 12.97 9.27 8.71 8.50 5.18 3.83 </line>
<line>VAL CA 10.50 8.23 9.68 9.26 5.55 5.51 6.29 3.77 </line>
<line>GLY CA 11.99 10.25 10.49 9.21 5.97 5.53 3.77 </line>
<line>ALA CA 11.29 9.62 8.48 7.27 5.46 3.80 </line>
<line>HIS CA 8.65 6.19 5.32 5.55 3.82 </line>
<line>ALA CA 6.12 5.16 5.60 3.83 </line>
<line>GLY CA 5.05 5.40 3.83 </line>
<line>GLU CA 5.50 3.81 </line>
<line>TYR CA 3.82 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 387</line>
<line>GLY CA 260</line>
<line>LYS CA 249</line>
<line>VAL CA 317</line>
<line>GLY CA 226</line>
<line>ALA CA 196</line>
<line>HIS CA 254</line>
<line>ALA CA 324</line>
<line>GLY CA 288</line>
<line>GLU CA 312</line>
<line>TYR CA 370</line>
<line>GLY CA 409</line>
</n14>
</entryChain>
<parallel>
<x>-13.746000289916992</x>
<y>-1.031999945640564</y>
<z>15.789999961853027</z>
</parallel>
<rotation>
<x>0.878000020980835</x>
<y>0.23800000548362732</y>
<z>0.41600000858306885</z>
<x>-0.25</x>
<y>0.9679999947547913</y>
<z>-0.026000000536441803</z>
<x>-0.4090000092983246</x>
<y>-0.08100000023841858</y>
<z>0.9089999794960022</z>
</rotation>
<rmsd>1.6252520084381104</rmsd>
<dmax>3.4859371185302734</dmax>
</indel>