NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1E0WA-2CNCA
confEVID 1E0WA-2CNCA
pdbIDA 1E0W
pdbIDB 2CNC
pdbChainA A
pdbChainB A
identity 0.286900013685226
indelSize 3
alignment <alignment>
<seq1>AESTLGAAAAQSGRYFGTAIASGR--LSDSTYTSIAGREFNMVTAENEMKIDATEPQRGQFNFSSADRVYNWAVQNGKQVRGHTLAWHSQQPGWMQS------LSGSALRQAMIDHINGVMAHYKGKIVQWDVVNEAFADGSSGARRDSNLQRS-GNDWIEVAFRTARAADPSAKLCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALGVDVAITELDIQGAP-----------------------------------ASTYANVTNDCLAV-SRCLGITVWGVRDSDSWRSEQ-------TPLLFNNDGSKKAAYTAVLDALNG---</seq1>
<seq2>--TGLKSAYKDNF-LIGAALNATIASGADERLNTLIAKEFNSITPENCMKWGVLRDAQGQWNWKDADAFVAFGTKHNLHMVGHTLVWHSQIHDEVFKNADGSYISKAALQKKMEEHITTLAGRYKGKLAAWDVVNEAVGDD--LKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLMYNDYNIERT--GKREATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKLGLRVHFTSLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKHSDKIDRVTFWGVSDDASWLNDFSIPGRTNYPLLFDRKLQPKDAYFRLLDLKRLEHH</seq2>
<ss_1> HHHHHH EEEEEE GGG-- HHHHHHHHHH EEE HHHH HHHHHHHHHHHH EEEE HHHH------ HHHHHHHHHHHHHHHHHH EE HHHH - GGHHHHHHHHHHHH EEEEEE HHHHHHHHHHHHHHH EEEE EE GGHHHHHHHHH EEEE EEE ----------------------------------- HHHHHHHHHHH - EEEE GGG GGG------- HHHHHHHHHH ---</ss_1>
<ss_2>-- HHHH HHHH-EEEEEE HHHH HHHHHHHHHH EEE HHHH HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHHH EEEE -- HHHHHHGGHHHHHHHHHHHHH EEEEEE -- HHHHHHHHHHHHH EEEE HHHHHHHHHHH EEEE EEEE HHHHHHHHHHHHHHHHHHH EEEEE GGG HHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1E0W</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1E0WA</entryIDChain>
<sequence>IASGR--LSDST</sequence>
<secondary-structure>E GGG-- HH</secondary-structure>
<atom-coordinate>
<line>ATOM 131 CA ILE A 20 23.154 42.037 20.817 1.00 7.14 C </line>
<line>ATOM 139 CA ALA A 21 26.920 41.784 21.432 1.00 8.87 C </line>
<line>ATOM 144 CA SER A 22 28.504 43.553 24.432 1.00 10.81 C </line>
<line>ATOM 150 CA GLY A 23 31.609 44.619 22.474 1.00 11.90 C </line>
<line>ATOM 154 CA ARG A 24 29.422 46.707 20.111 1.00 9.92 C </line>
<line>ATOM 165 CA LEU A 25 27.671 48.774 22.831 1.00 12.75 C </line>
<line>ATOM 173 CA SER A 26 30.119 51.701 22.537 1.00 14.32 C </line>
<line>ATOM 179 CA ASP A 27 28.975 52.266 18.894 1.00 10.15 C </line>
<line>ATOM 187 CA SER A 28 26.257 54.966 18.986 1.00 9.25 C </line>
<line>ATOM 193 CA THR A 29 24.826 54.066 15.566 1.00 9.08 C </line>
</atom-coordinate>
<distance-map>
<line> THR SER ASP SER LEU ARG GLY SER ALA ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 13.23 13.42 11.93 12.04 8.36 7.85 8.99 6.63 3.82 </line>
<line>ALA CA 13.77 13.42 10.98 10.48 7.17 5.68 5.58 3.83 </line>
<line>SER CA 14.24 12.84 10.33 8.52 5.52 5.43 3.82 </line>
<line>GLY CA 13.53 12.16 8.84 7.24 5.74 3.84 </line>
<line>ARG CA 9.79 8.92 5.71 5.60 3.84 </line>
<line>LEU CA 9.43 7.42 5.42 3.83 </line>
<line>SER CA 9.07 6.18 3.86 </line>
<line>ASP CA 5.62 3.83 </line>
<line>SER CA 3.81 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 491</line>
<line>ALA CA 397</line>
<line>SER CA 320</line>
<line>GLY CA 227</line>
<line>ARG CA 271</line>
<line>LEU CA 277</line>
<line>SER CA 168</line>
<line>ASP CA 194</line>
<line>SER CA 191</line>
<line>THR CA 244</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2CNC</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2CNCA</entryIDChain>
<sequence>LNATIASGADER</sequence>
<secondary-structure>E HHHH HH</secondary-structure>
<atom-coordinate>
<line>ATOM 119 CA LEU A 50 10.552 -7.182 17.195 1.00 5.64 C </line>
<line>ATOM 127 CA ASN A 51 12.972 -9.978 18.213 1.00 8.41 C </line>
<line>ATOM 135 CA ALA A 52 12.462 -13.400 16.576 1.00 11.75 C </line>
<line>ATOM 140 CA THR A 53 10.591 -14.796 19.484 1.00 12.25 C </line>
<line>ATOM 147 CA ILE A 54 8.062 -12.088 19.182 1.00 8.93 C </line>
<line>ATOM 155 CA ALA A 55 7.983 -12.354 15.369 1.00 6.47 C </line>
<line>ATOM 160 CA SER A 56 7.059 -16.041 15.673 1.00 7.56 C </line>
<line>ATOM 166 CA GLY A 57 3.452 -15.257 16.661 1.00 10.56 C </line>
<line>ATOM 170 CA ALA A 58 3.726 -17.607 19.591 1.00 12.93 C </line>
<line>ATOM 175 CA ASP A 59 3.195 -15.014 22.371 1.00 12.97 C </line>
<line>ATOM 183 CA GLU A 60 -0.545 -14.151 22.212 1.00 12.85 C </line>
<line>ATOM 192 CA ARG A 61 -0.091 -11.606 24.910 1.00 14.26 C </line>
</atom-coordinate>
<distance-map>
<line> ARG GLU ASP ALA GLY SER ALA ILE THR ALA ASN LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 13.87 14.03 11.93 12.69 10.77 9.64 6.06 5.85 7.95 6.53 3.84 </line>
<line>ASN CA 14.77 14.70 11.76 12.07 11.00 8.84 6.21 5.43 5.52 3.83 </line>
<line>ALA CA 15.17 14.20 11.05 10.15 9.20 6.08 4.76 5.28 3.73 </line>
<line>THR CA 12.40 11.48 7.94 7.42 7.69 5.34 5.45 3.72 </line>
<line>ILE CA 9.98 9.36 6.51 7.03 6.14 5.38 3.82 </line>
<line>ALA CA 12.52 11.08 8.89 7.97 5.53 3.81 </line>
<line>SER CA 12.49 10.21 7.80 5.38 3.82 </line>
<line>GLY CA 9.69 6.93 5.72 3.77 </line>
<line>ALA CA 8.88 6.09 3.84 </line>
<line>ASP CA 5.37 3.84 </line>
<line>GLU CA 3.74 </line>
<line>ARG CA </line>
</distance-map>
<n14>
<line>LEU CA 504</line>
<line>ASN CA 398</line>
<line>ALA CA 327</line>
<line>THR CA 267</line>
<line>ILE CA 365</line>
<line>ALA CA 386</line>
<line>SER CA 275</line>
<line>GLY CA 257</line>
<line>ALA CA 189</line>
<line>ASP CA 210</line>
<line>GLU CA 189</line>
<line>ARG CA 235</line>
</n14>
</entryChain>
<parallel>
<x>20.170000076293945</x>
<y>59.595001220703125</y>
<z>3.0320000648498535</z>
</parallel>
<rotation>
<x>0.3630000054836273</x>
<y>-0.9190000295639038</y>
<z>0.15199999511241913</z>
<x>-0.7860000133514404</x>
<y>-0.3889999985694885</y>
<z>-0.47999998927116394</z>
<x>0.5009999871253967</x>
<y>0.054999999701976776</y>
<z>-0.8640000224113464</z>
</rotation>
<rmsd>1.4775700569152832</rmsd>
<dmax>2.8332929611206055</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1E0W</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1E0WA</entryIDChain>
<sequence>NLQRS-GNDWI</sequence>
<secondary-structure>HHHH - GGHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1099 CA ASN A 142 30.217 14.117 25.484 1.00 8.54 C </line>
<line>ATOM 1107 CA LEU A 143 26.595 15.001 26.403 1.00 8.23 C </line>
<line>ATOM 1115 CA GLN A 144 25.102 12.447 23.959 1.00 7.92 C </line>
<line>ATOM 1124 CA ARG A 145 27.593 9.738 25.030 1.00 10.28 C </line>
<line>ATOM 1141 CA SER A 146 26.285 10.126 28.618 1.00 10.97 C </line>
<line>ATOM 1147 CA GLY A 147 22.945 8.646 27.431 1.00 11.12 C </line>
<line>ATOM 1151 CA ASN A 148 19.937 9.267 25.170 1.00 9.23 C </line>
<line>ATOM 1159 CA ASP A 149 18.060 10.791 28.140 1.00 9.02 C </line>
<line>ATOM 1167 CA TRP A 150 20.370 13.832 28.477 1.00 7.82 C </line>
<line>ATOM 1181 CA ILE A 151 17.920 16.160 26.664 1.00 6.73 C </line>
</atom-coordinate>
<distance-map>
<line> ILE TRP ASP ASN GLY SER ARG GLN LEU ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 12.52 10.30 12.88 11.37 9.31 6.42 5.13 5.59 3.84 </line>
<line>LEU CA 8.76 6.66 9.67 8.87 7.40 5.36 5.53 3.84 </line>
<line>GLN CA 8.53 6.69 8.36 6.19 5.58 5.34 3.83 </line>
<line>ARG CA 11.73 8.99 10.08 7.67 5.34 3.84 </line>
<line>SER CA 10.50 6.98 8.27 7.27 3.84 </line>
<line>GLY CA 9.07 5.88 5.38 3.81 </line>
<line>ASN CA 7.34 5.65 3.83 </line>
<line>ASP CA 5.57 3.83 </line>
<line>TRP CA 3.84 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ASN CA 308</line>
<line>LEU CA 394</line>
<line>GLN CA 320</line>
<line>ARG CA 241</line>
<line>SER CA 250</line>
<line>GLY CA 227</line>
<line>ASN CA 275</line>
<line>ASP CA 307</line>
<line>TRP CA 401</line>
<line>ILE CA 468</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2CNC</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2CNCA</entryIDChain>
<sequence>HWYKIMGDDFI</sequence>
<secondary-structure>HHHHHHGGHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1148 CA HIS A 178 35.664 -2.508 5.679 1.00 8.24 C </line>
<line>ATOM 1158 CA TRP A 179 32.760 -1.379 3.496 1.00 7.20 C </line>
<line>ATOM 1172 CA TYR A 180 34.404 2.022 3.497 1.00 9.30 C </line>
<line>ATOM 1184 CA LYS A 181 38.033 0.942 3.284 1.00 9.25 C </line>
<line>ATOM 1193 CA ILE A 182 37.409 -1.347 0.245 1.00 11.28 C </line>
<line>ATOM 1201 CA MET A 183 34.776 0.831 -1.497 1.00 13.05 C </line>
<line>ATOM 1209 CA GLY A 184 34.654 4.512 -0.404 1.00 14.52 C </line>
<line>ATOM 1213 CA ASP A 185 31.381 6.457 -0.671 1.00 14.57 C </line>
<line>ATOM 1221 CA ASP A 186 30.383 4.013 -3.377 1.00 15.03 C </line>
<line>ATOM 1229 CA PHE A 187 29.308 1.407 -0.828 1.00 13.25 C </line>
<line>ATOM 1240 CA ILE A 188 26.523 3.847 0.237 1.00 12.77 C </line>
</atom-coordinate>
<distance-map>
<line> ILE PHE ASP ASP GLY MET ILE LYS TYR TRP HIS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>HIS CA 12.39 9.90 12.35 11.79 9.34 7.96 5.82 4.82 5.18 3.80 </line>
<line>TRP CA 8.77 6.19 9.05 8.98 7.31 5.82 5.67 5.77 3.78 </line>
<line>TYR CA 8.72 6.71 8.21 6.80 4.63 5.15 5.56 3.79 </line>
<line>LYS CA 12.26 9.66 10.60 9.50 6.15 5.79 3.86 </line>
<line>ILE CA 12.06 8.62 9.55 9.90 6.51 3.84 </line>
<line>MET CA 8.96 5.54 5.74 6.62 3.84 </line>
<line>GLY CA 8.18 6.20 5.23 3.82 </line>
<line>ASP CA 5.59 5.46 3.78 </line>
<line>ASP CA 5.29 3.80 </line>
<line>PHE CA 3.85 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>HIS CA 361</line>
<line>TRP CA 441</line>
<line>TYR CA 375</line>
<line>LYS CA 290</line>
<line>ILE CA 314</line>
<line>MET CA 335</line>
<line>GLY CA 320</line>
<line>ASP CA 383</line>
<line>ASP CA 377</line>
<line>PHE CA 483</line>
<line>ILE CA 521</line>
</n14>
</entryChain>
<parallel>
<x>-9.744000434875488</x>
<y>9.678000450134277</y>
<z>24.81100082397461</z>
</parallel>
<rotation>
<x>0.6930000185966492</x>
<y>-0.7160000205039978</y>
<z>0.08299999684095383</z>
<x>-0.5490000247955322</x>
<y>-0.5979999899864197</y>
<z>-0.5839999914169312</z>
<x>0.46799999475479126</x>
<y>0.35899999737739563</y>
<z>-0.8080000281333923</z>
</rotation>
<rmsd>1.030174970626831</rmsd>
<dmax>1.6194119453430176</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1E0W</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1E0WA</entryIDChain>
<sequence>DCLAV-SRCLG</sequence>
<secondary-structure>HHH - E</secondary-structure>
<atom-coordinate>
<line>ATOM 1996 CA ASP A 253 4.529 32.396 7.491 1.00 8.89 C </line>
<line>ATOM 2004 CA CYS A 254 4.832 33.392 11.176 1.00 8.16 C </line>
<line>ATOM 2010 CA LEU A 255 1.772 35.710 10.999 1.00 10.09 C </line>
<line>ATOM 2018 CA ALA A 256 -0.313 32.833 9.555 1.00 10.58 C </line>
<line>ATOM 2023 CA VAL A 257 0.389 30.467 12.507 1.00 8.46 C </line>
<line>ATOM 2030 CA SER A 258 -1.512 31.258 15.734 1.00 8.98 C </line>
<line>ATOM 2037 CA ARG A 259 1.282 29.964 18.021 1.00 8.23 C </line>
<line>ATOM 2048 CA CYS A 260 4.194 31.729 16.250 1.00 7.50 C </line>
<line>ATOM 2054 CA LEU A 261 5.491 34.076 18.986 1.00 7.07 C </line>
<line>ATOM 2062 CA GLY A 262 7.793 36.286 16.937 1.00 7.56 C </line>
</atom-coordinate>
<distance-map>
<line> GLY LEU CYS ARG SER VAL ALA LEU CYS ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 10.72 11.66 8.79 11.28 10.28 6.78 5.28 5.56 3.83 </line>
<line>CYS CA 7.09 7.87 5.38 8.44 8.10 5.48 5.42 3.84 </line>
<line>LEU CA 8.48 8.96 7.02 9.09 7.28 5.63 3.84 </line>
<line>ALA CA 11.49 11.14 8.15 9.08 6.49 3.85 </line>
<line>VAL CA 10.41 9.00 5.48 5.61 3.83 </line>
<line>SER CA 10.64 8.22 5.75 3.84 </line>
<line>ARG CA 9.14 5.96 3.84 </line>
<line>CYS CA 5.85 3.83 </line>
<line>LEU CA 3.79 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>ASP CA 379</line>
<line>CYS CA 441</line>
<line>LEU CA 339</line>
<line>ALA CA 278</line>
<line>VAL CA 305</line>
<line>SER CA 250</line>
<line>ARG CA 311</line>
<line>CYS CA 412</line>
<line>LEU CA 412</line>
<line>GLY CA 476</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2CNC</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2CNCA</entryIDChain>
<sequence>LFIKHSDKIDR</sequence>
<secondary-structure>HHHH E</secondary-structure>
<atom-coordinate>
<line>ATOM 2333 CA LEU A 323 8.810 17.584 20.086 1.00 9.58 C </line>
<line>ATOM 2341 CA PHE A 324 7.694 14.859 17.651 1.00 7.86 C </line>
<line>ATOM 2352 CA ILE A 325 4.149 16.174 17.506 1.00 7.88 C </line>
<line>ATOM 2360 CA LYS A 326 5.530 19.664 16.949 1.00 11.43 C </line>
<line>ATOM 2369 CA HIS A 327 7.297 18.327 13.770 1.00 11.53 C </line>
<line>ATOM 2379 CA SER A 328 4.995 15.573 12.571 1.00 12.15 C </line>
<line>ATOM 2385 CA ASP A 329 4.790 17.268 9.146 1.00 11.20 C </line>
<line>ATOM 2393 CA LYS A 330 8.439 16.152 8.949 1.00 8.58 C </line>
<line>ATOM 2402 CA ILE A 331 8.338 12.869 10.876 1.00 6.43 C </line>
<line>ATOM 2410 CA ASP A 332 6.737 9.810 9.118 1.00 6.96 C </line>
<line>ATOM 2418 CA ARG A 333 7.338 7.337 12.003 1.00 5.75 C </line>
</atom-coordinate>
<distance-map>
<line> ARG ASP ILE LYS ASP SER HIS LYS ILE PHE LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 13.13 13.60 10.36 11.23 11.66 8.66 6.54 4.99 5.51 3.82 </line>
<line>PHE CA 9.41 9.96 7.09 8.83 9.30 5.80 5.22 5.32 3.78 </line>
<line>ILE CA 10.89 10.84 8.51 9.57 8.46 5.04 5.34 3.79 </line>
<line>LYS CA 13.40 12.64 9.54 9.21 8.20 6.02 3.88 </line>
<line>HIS CA 11.13 9.72 6.26 5.41 5.37 3.78 </line>
<line>SER CA 8.58 6.94 4.62 5.03 3.83 </line>
<line>ASP CA 10.64 7.71 5.91 3.82 </line>
<line>LYS CA 9.39 6.57 3.81 </line>
<line>ILE CA 5.73 3.87 </line>
<line>ASP CA 3.85 </line>
<line>ARG CA </line>
</distance-map>
<n14>
<line>LEU CA 388</line>
<line>PHE CA 469</line>
<line>ILE CA 386</line>
<line>LYS CA 319</line>
<line>HIS CA 334</line>
<line>SER CA 353</line>
<line>ASP CA 272</line>
<line>LYS CA 331</line>
<line>ILE CA 435</line>
<line>ASP CA 423</line>
<line>ARG CA 507</line>
</n14>
</entryChain>
<parallel>
<x>-4.984000205993652</x>
<y>15.605999946594238</y>
<z>-1.649999976158142</z>
</parallel>
<rotation>
<x>0.6169999837875366</x>
<y>-0.7829999923706055</y>
<z>-0.07599999755620956</z>
<x>-0.6970000267028809</x>
<y>-0.5</y>
<z>-0.5139999985694885</z>
<x>0.36500000953674316</x>
<y>0.3700000047683716</y>
<z>-0.8550000190734863</z>
</rotation>
<rmsd>0.8285940289497375</rmsd>
<dmax>1.3329689502716064</dmax>
</indel>