1E14M-2GMRL | |
confEVID | 1E14M-2GMRL |
pdbIDA | 1E14 |
pdbIDB | 2GMR |
pdbChainA | M |
pdbChainB | L |
identity | 0.284700006246567 |
indelSize | 3 |
alignment | <alignment> <seq1>AEYQNIFSQVQVRGPADLGMTEDVNLANRSGVGPFSTLLGWFGNAQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYGLSFAAPLKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLRYNPFHDLSIAFLYGSALLFAMHGATILAVSRFGGERELEQIADRG-----TAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDN------WYVWGQNHGM-------</seq1> <seq2>-------------------ALLSFERKYRVPGG--TLVGGNLFDFWVGPFYVGFFGVATFFFAALGIILIAWSAVLQGTWNP-------QLISVYPPALEYGLGG-APLAKGGLWQIITICATGAFVSWALREVEICRKLGIGYHIPFAFAFAILAYLTLVLFRPVMMGAWGYAFPYGIWTHLDWVSNTGYTYGNFHYNPAHMIAISFFFTNALALALHGALVLS------------AANPEKGKEMRTPNHEDTFFRDLVGYSIGTLGIHRLGLLLSLSAVFFSALCMIITGTIWFDQWVDWWQWWVKLPWWANIPGGIN</seq2> <ss_1> GGG HHHH HHHHHHHHHHHHHHHHHHHHHHHH HHHHHH HHHH HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHIIIIHHHHH GGG HHHHHHHHHHHHH GGG HHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHH -----HHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHH ------HHHH -------</ss_1> <ss_2>------------------- GGG -- EEE HHHHHHHHHHHHHHHHHHHHHHH H-------HHH GGG - HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHH HHHHHHHHIIIIHHHHH GGG HHHHHHHHHHGGG GGG HHHHHHHHHHHHHHHHHHHHHHHH------------HH HHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHH GGGGGHHHH </ss_2> </alignment> |
indel | <indel> <confEVID></confEVID> <index>0</index> <entryChain> <pdbID>1E14</pdbID> <pdbChain>M</pdbChain> <entryIDChain>1E14M</entryIDChain> <sequence>IADRG-----TAAER</sequence> <secondary-structure>HH -----HHHHH</secondary-structure> <atom-coordinate> <line>ATOM 5966 CA ILE M 238 6.741 112.607 50.087 1.00 30.14 C </line> <line>ATOM 5974 CA ALA M 239 5.971 115.619 52.293 1.00 30.64 C </line> <line>ATOM 5979 CA ASP M 240 2.468 114.496 53.347 1.00 27.01 C </line> <line>ATOM 5987 CA ARG M 241 1.571 110.899 52.547 1.00 28.19 C </line> <line>ATOM 5998 CA GLY M 242 -1.783 110.292 50.921 1.00 27.76 C </line> <line>ATOM 6002 CA THR M 243 -3.924 107.430 49.723 1.00 30.39 C </line> <line>ATOM 6009 CA ALA M 244 -2.056 107.374 46.358 1.00 29.12 C </line> <line>ATOM 6014 CA ALA M 245 1.188 106.547 48.131 1.00 28.72 C </line> <line>ATOM 6019 CA GLU M 246 -0.533 104.091 50.400 1.00 30.14 C </line> <line>ATOM 6028 CA ARG M 247 -2.326 101.996 47.866 1.00 27.40 C </line> </atom-coordinate> <distance-map> <line> ARG GLU ALA ALA THR GLY ARG ASP ALA ILE </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>ILE CA 14.13 11.20 8.45 10.89 11.86 8.87 5.97 5.70 3.81 </line> <line>ALA CA 16.55 13.37 11.07 12.95 13.10 9.51 6.46 3.83 </line> <line>ASP CA 14.47 11.22 9.59 10.96 10.19 6.45 3.79 </line> <line>ARG CA 10.79 7.44 6.21 7.99 7.09 3.78 </line> <line>GLY CA 8.86 6.35 5.53 5.42 3.77 </line> <line>THR CA 5.96 4.81 5.43 3.85 </line> <line>ALA CA 5.59 5.43 3.79 </line> <line>ALA CA 5.76 3.76 </line> <line>GLU CA 3.75 </line> <line>ARG CA </line> </distance-map> <n14> <line>ILE CA 213</line> <line>ALA CA 155</line> <line>ASP CA 156</line> <line>ARG CA 213</line> <line>GLY CA 217</line> <line>THR CA 241</line> <line>ALA CA 305</line> <line>ALA CA 333</line> <line>GLU CA 294</line> <line>ARG CA 276</line> </n14> </entryChain> <entryChain> <pdbID>2GMR</pdbID> <pdbChain>L</pdbChain> <entryIDChain>2GMRL</entryIDChain> <sequence>AANPEKGKEMRTPNH</sequence> <secondary-structure>HH HHH</secondary-structure> <atom-coordinate> <line>ATOM 1539 CA ALA L 197 32.601 12.219 35.492 1.00 42.78 C </line> <line>ATOM 1544 CA ALA L 198 35.913 10.844 34.224 1.00 45.18 C </line> <line>ATOM 1549 CA ASN L 199 36.667 14.156 32.472 1.00 47.01 C </line> <line>ATOM 1557 CA PRO L 200 35.509 16.902 34.886 1.00 48.59 C </line> <line>ATOM 1564 CA GLU L 201 36.251 20.623 34.745 1.00 53.78 C </line> <line>ATOM 1573 CA LYS L 202 39.967 21.167 34.104 1.00 58.74 C </line> <line>ATOM 1582 CA GLY L 203 42.079 20.871 37.232 1.00 57.13 C </line> <line>ATOM 1586 CA LYS L 204 39.562 19.009 39.371 1.00 53.71 C </line> <line>ATOM 1595 CA GLU L 205 39.597 15.367 40.477 1.00 52.88 C </line> <line>ATOM 1604 CA MET L 206 37.574 12.935 38.391 1.00 49.52 C </line> <line>ATOM 1612 CA ARG L 207 34.043 12.725 39.799 1.00 46.20 C </line> <line>ATOM 1623 CA THR L 208 32.540 9.662 41.501 1.00 43.60 C </line> <line>ATOM 1630 CA PRO L 209 29.472 7.462 40.890 1.00 42.86 C </line> <line>ATOM 1637 CA ASN L 210 27.745 9.576 43.570 1.00 44.41 C </line> <line>ATOM 1645 CA HIS L 211 28.207 12.594 41.317 1.00 44.61 C </line> </atom-coordinate> <distance-map> <line> HIS ASN PRO THR ARG MET GLU LYS GLY LYS GLU PRO ASN ALA ALA </line> <line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line> <line>ALA CA 7.31 9.79 7.85 6.53 4.57 5.80 9.15 10.47 12.95 11.67 9.19 5.55 5.42 3.80 </line> <line>ALA CA 10.62 12.48 9.87 8.11 6.17 4.95 8.55 10.32 12.15 11.09 9.80 6.11 3.82 </line> <line>ASN CA 12.34 14.96 12.94 10.90 7.91 6.11 8.61 8.92 9.85 7.92 6.87 3.84 </line> <line>PRO CA 10.64 13.76 12.71 10.25 6.61 5.68 7.09 6.40 8.03 6.22 3.80 </line> <line>GLU CA 13.13 16.50 16.03 13.40 9.63 8.61 8.47 5.91 6.34 3.81 </line> <line>LYS CA 16.24 19.32 18.55 15.56 11.78 9.58 8.63 5.71 3.79 </line> <line>GLY CA 16.66 19.32 18.76 15.33 11.73 9.20 6.85 3.79 </line> <line>LYS CA 13.19 15.69 15.41 11.88 8.37 6.47 3.81 </line> <line>GLU CA 11.75 13.55 12.85 9.13 6.19 3.79 </line> <line>MET CA 9.82 11.61 10.09 6.76 3.81 </line> <line>ARG CA 6.03 7.99 7.06 3.81 </line> <line>THR CA 5.24 5.22 3.82 </line> <line>PRO CA 5.30 3.83 </line> <line>ASN CA 3.79 </line> <line>HIS CA </line> </distance-map> <n14> <line>ALA CA 231</line> <line>ALA CA 189</line> <line>ASN CA 164</line> <line>PRO CA 170</line> <line>GLU CA 130</line> <line>LYS CA 93</line> <line>GLY CA 88</line> <line>LYS CA 107</line> <line>GLU CA 128</line> <line>MET CA 161</line> <line>ARG CA 192</line> <line>THR CA 197</line> <line>PRO CA 238</line> <line>ASN CA 205</line> <line>HIS CA 242</line> </n14> </entryChain> <parallel> <x>-32.85300064086914</x> <y>97.58399963378906</y> <z>13.675000190734863</z> </parallel> <rotation> <x>-0.3919999897480011</x> <y>0.8989999890327454</y> <z>-0.19699999690055847</z> <x>-0.5379999876022339</x> <y>-0.05000000074505806</y> <z>0.8410000205039978</z> <x>-0.7459999918937683</x> <y>-0.4359999895095825</y> <z>-0.503000020980835</z> </rotation> <rmsd>4.101834774017334</rmsd> <dmax>7.025901794433594</dmax> </indel> <indel> <confEVID></confEVID> <index>1</index> <entryChain> <pdbID>2GMR</pdbID> <pdbChain>L</pdbChain> <entryIDChain>2GMRL</entryIDChain> <sequence>RVPGG--TLVGG</sequence> <secondary-structure> -- </secondary-structure> <atom-coordinate> <line>ATOM 81 CA ARG L 10 44.571 -17.484 26.251 1.00 49.80 C </line> <line>ATOM 92 CA VAL L 11 44.144 -20.878 27.886 1.00 50.70 C </line> <line>ATOM 99 CA PRO L 12 42.667 -24.114 26.452 1.00 52.14 C </line> <line>ATOM 106 CA GLY L 13 38.945 -24.874 26.610 1.00 50.90 C </line> <line>ATOM 110 CA GLY L 14 35.517 -23.366 26.150 1.00 55.10 C </line> <line>ATOM 114 CA THR L 15 34.722 -25.175 22.896 1.00 58.16 C </line> <line>ATOM 121 CA LEU L 16 31.237 -26.568 22.222 1.00 60.56 C </line> <line>ATOM 129 CA VAL L 17 32.300 -28.777 19.311 1.00 64.71 C </line> <line>ATOM 136 CA GLY L 18 35.543 -30.277 18.023 1.00 67.30 C </line> <line>ATOM 140 CA GLY L 19 37.351 -30.113 21.344 1.00 69.53 C </line> </atom-coordinate> <distance-map> <line> GLY GLY VAL LEU THR GLY GLY PRO VAL ARG </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>ARG CA 15.35 17.69 18.06 16.63 12.94 10.80 9.29 6.90 3.79 </line> <line>VAL CA 13.20 16.11 16.62 15.20 11.50 9.14 6.68 3.84 </line> <line>PRO CA 9.50 12.64 13.42 12.43 8.77 7.20 3.80 </line> <line>GLY CA 7.60 10.70 10.61 9.03 5.63 3.77 </line> <line>GLY CA 8.48 10.67 9.30 6.63 3.81 </line> <line>THR CA 5.81 7.10 5.63 3.81 </line> <line>LEU CA 7.12 7.07 3.81 </line> <line>VAL CA 5.61 3.80 </line> <line>GLY CA 3.78 </line> <line>GLY CA </line> </distance-map> <n14> <line>ARG CA 256</line> <line>VAL CA 222</line> <line>PRO CA 232</line> <line>GLY CA 252</line> <line>GLY CA 283</line> <line>THR CA 293</line> <line>LEU CA 253</line> <line>VAL CA 230</line> <line>GLY CA 190</line> <line>GLY CA 193</line> </n14> </entryChain> <entryChain> <pdbID>1E14</pdbID> <pdbChain>M</pdbChain> <entryIDChain>1E14M</entryIDChain> <sequence>RSGVGPFSTLLG</sequence> <secondary-structure> HHHH</secondary-structure> <atom-coordinate> <line>ATOM 4281 CA ARG M 29 17.359 132.414 29.584 1.00 50.07 C </line> <line>ATOM 4292 CA SER M 30 15.726 132.617 26.172 1.00 49.42 C </line> <line>ATOM 4298 CA GLY M 31 12.057 133.414 25.853 1.00 48.34 C </line> <line>ATOM 4302 CA VAL M 32 9.463 130.675 25.517 1.00 48.38 C </line> <line>ATOM 4309 CA GLY M 33 9.387 128.448 22.467 1.00 42.74 C </line> <line>ATOM 4313 CA PRO M 34 6.068 127.640 20.827 1.00 39.78 C </line> <line>ATOM 4320 CA PHE M 35 3.554 125.176 22.278 1.00 41.81 C </line> <line>ATOM 4331 CA SER M 36 2.995 121.748 20.821 1.00 40.86 C </line> <line>ATOM 4337 CA THR M 37 -0.485 120.241 21.030 1.00 41.76 C </line> <line>ATOM 4344 CA LEU M 38 1.123 117.078 19.659 1.00 42.66 C </line> <line>ATOM 4352 CA LEU M 39 3.426 116.753 22.713 1.00 40.94 C </line> <line>ATOM 4360 CA GLY M 40 0.490 117.965 24.810 1.00 39.04 C </line> </atom-coordinate> <distance-map> <line> GLY LEU LEU THR SER PHE PRO GLY VAL GLY SER ARG </line> <line> CA CA CA CA CA CA CA CA CA CA CA CA </line> <line>ARG CA 22.72 22.06 24.44 23.23 19.92 17.21 15.07 11.40 9.05 6.56 3.79 </line> <line>SER CA 21.18 20.37 22.30 21.03 17.57 14.79 12.11 8.44 6.59 3.77 </line> <line>GLY CA 19.33 19.02 20.61 18.82 15.61 12.37 9.72 6.58 3.79 </line> <line>VAL CA 15.57 15.43 16.99 15.10 11.98 8.70 6.54 3.78 </line> <line>GLY CA 13.95 13.13 14.33 12.92 9.41 6.69 3.79 </line> <line>PRO CA 11.86 11.36 11.72 9.89 6.65 3.81 </line> <line>PHE CA 8.23 8.44 8.85 6.50 3.77 </line> <line>SER CA 6.04 5.36 5.16 3.80 </line> <line>THR CA 4.52 5.50 3.80 </line> <line>LEU CA 5.27 3.84 </line> <line>LEU CA 3.81 </line> <line>GLY CA </line> </distance-map> <n14> <line>ARG CA 231</line> <line>SER CA 200</line> <line>GLY CA 179</line> <line>VAL CA 192</line> <line>GLY CA 171</line> <line>PRO CA 166</line> <line>PHE CA 193</line> <line>SER CA 178</line> <line>THR CA 179</line> <line>LEU CA 162</line> <line>LEU CA 178</line> <line>GLY CA 200</line> </n14> </entryChain> <parallel> <x>29.559999465942383</x> <y>-150.98399353027344</y> <z>0.8339999914169312</z> </parallel> <rotation> <x>0.2630000114440918</x> <y>0.9589999914169312</y> <z>0.10400000214576721</z> <x>0.5099999904632568</x> <y>-0.2290000021457672</y> <z>0.8289999961853027</z> <x>0.8190000057220459</x> <y>-0.16500000655651093</y> <z>-0.5490000247955322</z> </rotation> <rmsd>3.6994049549102783</rmsd> <dmax>5.023240089416504</dmax> </indel> <indel> <confEVID></confEVID> <index>2</index> <entryChain> <pdbID>2GMR</pdbID> <pdbChain>L</pdbChain> <entryIDChain>2GMRL</entryIDChain> <sequence>YGLGG-APLAK</sequence> <secondary-structure>G - </secondary-structure> <atom-coordinate> <line>ATOM 568 CA TYR L 73 7.407 -20.335 -7.108 1.00 67.65 C </line> <line>ATOM 580 CA GLY L 74 5.607 -20.128 -3.776 1.00 63.07 C </line> <line>ATOM 584 CA LEU L 75 7.740 -21.941 -1.209 1.00 60.86 C </line> <line>ATOM 592 CA GLY L 76 9.366 -24.257 -3.711 1.00 61.53 C </line> <line>ATOM 596 CA GLY L 77 12.864 -24.158 -5.132 1.00 64.39 C </line> <line>ATOM 600 CA ALA L 78 13.753 -22.071 -8.183 1.00 67.83 C </line> <line>ATOM 605 CA PRO L 79 16.383 -21.962 -10.966 1.00 68.45 C </line> <line>ATOM 612 CA LEU L 80 19.649 -20.489 -9.673 1.00 70.69 C </line> <line>ATOM 620 CA ALA L 81 18.840 -17.613 -12.030 1.00 73.32 C </line> <line>ATOM 625 CA LYS L 82 15.285 -16.855 -10.916 1.00 73.10 C </line> </atom-coordinate> <distance-map> <line> LYS ALA LEU PRO ALA GLY GLY LEU GLY TYR </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>TYR CA 9.42 12.74 12.51 9.90 6.67 6.95 5.55 6.12 3.79 </line> <line>GLY CA 12.46 15.80 15.23 13.08 9.46 8.41 5.58 3.80 </line> <line>LEU CA 13.30 16.09 14.68 13.03 9.21 6.82 3.78 </line> <line>GLY CA 11.91 14.25 12.47 10.35 6.63 3.78 </line> <line>GLY CA 9.63 11.23 8.95 7.16 3.80 </line> <line>ALA CA 6.08 7.78 6.28 3.83 </line> <line>PRO CA 5.22 5.11 3.81 </line> <line>LEU CA 5.81 3.81 </line> <line>ALA CA 3.80 </line> <line>LYS CA </line> </distance-map> <n14> <line>TYR CA 209</line> <line>GLY CA 219</line> <line>LEU CA 239</line> <line>GLY CA 218</line> <line>GLY CA 219</line> <line>ALA CA 220</line> <line>PRO CA 210</line> <line>LEU CA 264</line> <line>ALA CA 252</line> <line>LYS CA 281</line> </n14> </entryChain> <entryChain> <pdbID>1E14</pdbID> <pdbChain>M</pdbChain> <entryIDChain>1E14M</entryIDChain> <sequence>YGLSFAAPLKE</sequence> <secondary-structure> </secondary-structure> <atom-coordinate> <line>ATOM 4860 CA TYR M 101 50.849 105.611 15.989 1.00 61.11 C </line> <line>ATOM 4872 CA GLY M 102 50.230 104.659 19.640 1.00 55.96 C </line> <line>ATOM 4876 CA LEU M 103 48.960 107.523 21.752 1.00 55.91 C </line> <line>ATOM 4884 CA SER M 104 50.738 109.916 19.441 1.00 63.69 C </line> <line>ATOM 4890 CA PHE M 105 48.957 112.755 17.681 1.00 67.61 C </line> <line>ATOM 4901 CA ALA M 106 51.159 112.294 14.585 1.00 68.31 C </line> <line>ATOM 4906 CA ALA M 107 49.004 110.005 12.413 1.00 67.79 C </line> <line>ATOM 4911 CA PRO M 108 47.773 111.994 9.430 1.00 66.42 C </line> <line>ATOM 4918 CA LEU M 109 44.466 113.821 9.282 1.00 66.69 C </line> <line>ATOM 4926 CA LYS M 110 42.735 111.282 6.961 1.00 68.93 C </line> <line>ATOM 4935 CA GLU M 111 44.079 108.210 8.811 1.00 68.83 C </line> </atom-coordinate> <distance-map> <line> GLU LYS LEU PRO ALA ALA PHE SER LEU GLY TYR </line> <line> CA CA CA CA CA CA CA CA CA CA CA </line> <line>TYR CA 10.20 13.40 12.37 9.66 5.96 6.84 7.58 5.52 6.36 3.82 </line> <line>GLY CA 12.95 16.15 14.98 12.81 9.07 9.20 8.43 5.29 3.78 </line> <line>LEU CA 13.85 16.48 14.68 13.16 9.66 8.89 6.63 3.77 </line> <line>SER CA 12.66 14.89 12.56 10.65 7.24 5.42 3.79 </line> <line>PHE CA 11.10 12.48 9.58 8.37 5.94 3.83 </line> <line>ALA CA 10.01 11.41 8.67 6.17 3.82 </line> <line>ALA CA 6.36 8.41 6.71 3.79 </line> <line>PRO CA 5.32 5.66 3.78 </line> <line>LEU CA 5.64 3.85 </line> <line>LYS CA 3.83 </line> <line>GLU CA </line> </distance-map> <n14> <line>TYR CA 212</line> <line>GLY CA 229</line> <line>LEU CA 251</line> <line>SER CA 233</line> <line>PHE CA 242</line> <line>ALA CA 186</line> <line>ALA CA 219</line> <line>PRO CA 210</line> <line>LEU CA 256</line> <line>LYS CA 273</line> <line>GLU CA 290</line> </n14> </entryChain> <parallel> <x>-37.2760009765625</x> <y>-131.4530029296875</y> <z>-21.92300033569336</z> </parallel> <rotation> <x>-0.6159999966621399</x> <y>-0.6549999713897705</y> <z>-0.43799999356269836</z> <x>0.6819999814033508</x> <y>-0.722000002861023</y> <z>0.11900000274181366</z> <x>-0.39399999380111694</x> <y>-0.22499999403953552</y> <z>0.890999972820282</z> </rotation> <rmsd>0.6515190005302429</rmsd> <dmax>1.2448680400848389</dmax> </indel> |