NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1E1RA-2HLDT
confEVID 1E1RA-2HLDT
pdbIDA 1E1R
pdbIDB 2HLD
pdbChainA A
pdbChainB T
identity 0.702300012111664
indelSize 1
alignment <alignment>
<seq1>DLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKARRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQV---AGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRTDGKISEESDAKLKEIVTNFLAGFEA</seq1>
<seq2>NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQDL------DASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT---</seq2>
<ss_1> EEEEEEEEEEEEEEEEEE EEEEE EEEEEEE EEEEEE GGG EEEE EEE GGG EE EEEEE HHHHHH EEEEEE HHHHHHHHHHGGHHHH EEEEEEE HHHHHHHHHHHHH GGGEEEEEE HHHH HHHHHHHHHHHHHH EEEEEEE HHHHHHHHHHHHHH GGG HHHHHHHHH EEEEE HHHHHHHHH EEEEE HHHHH EE GGGG HHHHHH---HHHHHHHHHHHHHH GGG HHHHHHHHHHHHHHHH HHHHHHHHHHHH HHHHHHHHHHHHHHH HHHHHHHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> EEEEEEEEEEEEEEEEEE EEEEE EEEEEEE EEEEEE EEEE EEEEE EE EEEEE EEE HHHHHH EE EEEEEE HHHHHHHHHGGGHHHH EEEEEEE HHHHHHHHHHHHH GGGEEEEEE HHHH HHHHHHHHHHHHHH EEEEEEE HHHHHHHHHHHHHH GGG HHHHHHHHGGG EEEE HHHHH EEEE HHHHH EE GGG HHHHHH HHHHHHHHHHHHH ------ HHHHHHHHHHHHHHHH HHHHHHHHHHHH GGGHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHHHH ---</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1E1R</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1E1RA</entryIDChain>
<sequence>AMKQV---AGTMK</sequence>
<secondary-structure>HHHHH---HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2717 CA ALA A 382 85.518 88.327 32.283 1.00 56.51 C </line>
<line>ATOM 2722 CA MET A 383 87.130 86.344 35.108 1.00 54.72 C </line>
<line>ATOM 2730 CA LYS A 384 87.776 89.597 37.020 1.00 54.63 C </line>
<line>ATOM 2739 CA GLN A 385 84.075 90.318 36.897 1.00 54.65 C </line>
<line>ATOM 2748 CA VAL A 386 82.744 86.971 38.152 1.00 50.40 C </line>
<line>ATOM 2755 CA ALA A 387 85.687 86.388 40.513 1.00 47.32 C </line>
<line>ATOM 2760 CA GLY A 388 85.233 89.651 42.418 1.00 43.07 C </line>
<line>ATOM 2764 CA THR A 389 81.623 88.715 43.205 1.00 45.33 C </line>
<line>ATOM 2771 CA MET A 390 82.345 85.182 44.296 1.00 46.98 C </line>
<line>ATOM 2779 CA LYS A 391 85.170 86.327 46.557 1.00 47.44 C </line>
</atom-coordinate>
<distance-map>
<line> LYS MET THR GLY ALA VAL GLN LYS MET ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 14.42 12.82 11.60 10.23 8.46 6.63 5.23 5.40 3.81 </line>
<line>MET CA 11.62 10.42 10.08 8.24 5.59 5.38 5.32 3.83 </line>
<line>LYS CA 10.41 10.10 8.77 5.97 5.18 5.79 3.77 </line>
<line>GLN CA 10.51 9.17 6.96 5.68 5.58 3.81 </line>
<line>VAL CA 8.77 6.41 5.46 5.62 3.82 </line>
<line>ALA CA 6.07 5.19 5.40 3.81 </line>
<line>GLY CA 5.31 5.64 3.81 </line>
<line>THR CA 5.43 3.77 </line>
<line>MET CA 3.80 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ALA CA 367</line>
<line>MET CA 440</line>
<line>LYS CA 351</line>
<line>GLN CA 330</line>
<line>VAL CA 400</line>
<line>ALA CA 425</line>
<line>GLY CA 325</line>
<line>THR CA 326</line>
<line>MET CA 408</line>
<line>LYS CA 370</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2HLD</pdbID>
<pdbChain>T</pdbChain>
<entryIDChain>2HLDT</entryIDChain>
<sequence>ALKQVAGSLKLFL</sequence>
<secondary-structure>HHHHH HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 55215 CA ALA T 384 -1.255 -37.971 107.187 1.00 74.50 C </line>
<line>ATOM 55220 CA LEU T 385 1.741 -37.161 109.396 1.00 74.58 C </line>
<line>ATOM 55228 CA LYS T 386 2.769 -40.823 109.464 1.00 71.86 C </line>
<line>ATOM 55237 CA GLN T 387 2.910 -40.921 105.669 1.00 75.55 C </line>
<line>ATOM 55246 CA VAL T 388 4.710 -37.671 104.873 1.00 77.10 C </line>
<line>ATOM 55253 CA ALA T 389 7.488 -38.463 107.344 1.00 77.17 C </line>
<line>ATOM 55258 CA GLY T 390 8.352 -42.041 106.421 1.00 77.06 C </line>
<line>ATOM 55262 CA SER T 391 11.753 -42.708 107.955 1.00 76.65 C </line>
<line>ATOM 55268 CA LEU T 392 12.250 -39.192 109.309 1.00 75.05 C </line>
<line>ATOM 55276 CA LYS T 393 12.945 -40.473 112.822 1.00 75.64 C </line>
<line>ATOM 55285 CA LEU T 394 15.482 -43.111 111.773 1.00 78.03 C </line>
<line>ATOM 55293 CA PHE T 395 17.035 -40.634 109.338 1.00 78.36 C </line>
<line>ATOM 55304 CA LEU T 396 17.577 -37.791 111.806 1.00 76.73 C </line>
</atom-coordinate>
<distance-map>
<line> LEU PHE LEU LYS LEU SER GLY ALA VAL GLN LYS LEU ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 19.39 18.61 18.10 15.48 13.73 13.86 10.46 8.76 6.41 5.32 5.43 3.81 </line>
<line>LEU CA 16.03 15.68 15.16 12.18 10.70 11.54 8.74 6.24 5.43 5.42 3.80 </line>
<line>LYS CA 15.30 14.27 13.12 10.72 9.62 9.30 6.47 5.69 5.90 3.80 </line>
<line>GLN CA 16.20 14.60 14.15 12.33 10.17 9.31 5.61 5.46 3.80 </line>
<line>VAL CA 14.62 13.44 13.90 11.78 8.88 9.19 5.90 3.80 </line>
<line>ALA CA 11.05 9.99 10.25 7.99 5.20 6.05 3.79 </line>
<line>GLY CA 11.50 9.27 8.98 8.03 5.63 3.79 </line>
<line>SER CA 8.54 5.84 5.35 5.49 3.80 </line>
<line>LEU CA 6.05 5.00 5.65 3.80 </line>
<line>LYS CA 5.45 5.38 3.81 </line>
<line>LEU CA 5.72 3.80 </line>
<line>PHE CA 3.80 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>ALA CA 375</line>
<line>LEU CA 430</line>
<line>LYS CA 352</line>
<line>GLN CA 312</line>
<line>VAL CA 390</line>
<line>ALA CA 374</line>
<line>GLY CA 272</line>
<line>SER CA 256</line>
<line>LEU CA 371</line>
<line>LYS CA 361</line>
<line>LEU CA 259</line>
<line>PHE CA 302</line>
<line>LEU CA 351</line>
</n14>
</entryChain>
<parallel>
<x>78.52899932861328</x>
<y>127.9540023803711</y>
<z>-70.61199951171875</z>
</parallel>
<rotation>
<x>-0.4230000078678131</x>
<y>-0.23000000417232513</y>
<z>0.8759999871253967</z>
<x>0.25200000405311584</x>
<y>-0.9589999914169312</y>
<z>-0.12999999523162842</z>
<x>0.8700000047683716</x>
<y>0.16599999368190765</y>
<z>0.46399998664855957</z>
</rotation>
<rmsd>3.385835886001587</rmsd>
<dmax>5.061995983123779</dmax>
</indel>