NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
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Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1E3DA-1YRQA
confEVID 1E3DA-1YRQA
pdbIDA 1E3D
pdbIDB 1YRQ
pdbChainA A
pdbChainB A
identity 0.622099995613098
indelSize 1
alignment <alignment>
<seq1>--SRPSVVYLHAAECTGCSEALLRTYQPFIDTLILDTISLDYHETIMAAAGEAAEEALQAAVNGPDGFICLVEGAIPTGMDNKYGYIAGHTMYDICKNILPKAKAVVSIGTCACYGGIQAAKPNPTAAKGINDCYADLGVKAINVPGCPPNPLNMVGTLVAFLKGQKIELDEVGRPVMFFGQSVHDLCERRKHFDAGEFAPSFNSEEARKGWCLYDVGCKGPETYNNCPKVLFNETNWPVAAGHPCIGCSEPNFWDDMTPFYQN-</seq1>
<seq2>AKHRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEAL---GVKTINIPGCPPNPINFVGAVVHVLTKGIPDLDSNGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG</seq2>
<ss_1>-- EEEE HHHHHGGG HHHIIIII HHHHHHHHHHHH EEEEEEEEEE EEE EEEHHHHHHHGGG EEEEE EEE HHHHH EEE HHHHHHHHHH HHHH HHHHH HHHH GGG HHHH HHHH -</ss_1>
<ss_2> EEEEE HHHHHGGG HHHHHH EE HHHHHHHHHHHH EEEEEEEEE EEE EEEHHHHHHHHH EEEEE GGG EEE HHHH --- EEE HHHHHHHHHH GGG HHHH HHHH GGG HHHH HHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1YRQ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1YRQA</entryIDChain>
<sequence>VSEAL---GVKTI</sequence>
<secondary-structure>HHHH --- E</secondary-structure>
<atom-coordinate>
<line>ATOM 950 CA VAL A 133 27.236 28.921 86.240 1.00 11.03 C </line>
<line>ATOM 957 CA SER A 134 26.638 32.321 87.831 1.00 10.83 C </line>
<line>ATOM 963 CA GLU A 135 29.217 31.561 90.538 1.00 13.35 C </line>
<line>ATOM 972 CA ALA A 136 31.792 30.145 88.148 1.00 14.03 C </line>
<line>ATOM 977 CA LEU A 137 31.376 33.000 85.656 1.00 12.90 C </line>
<line>ATOM 985 CA GLY A 138 30.393 35.912 87.867 1.00 9.02 C </line>
<line>ATOM 989 CA VAL A 139 27.336 36.921 85.889 1.00 13.29 C </line>
<line>ATOM 996 CA LYS A 140 23.618 36.898 86.508 1.00 11.98 C </line>
<line>ATOM 1005 CA THR A 141 21.606 34.075 85.001 1.00 13.32 C </line>
<line>ATOM 1012 CA ILE A 142 17.959 33.442 84.509 1.00 11.23 C </line>
</atom-coordinate>
<distance-map>
<line> ILE THR LYS VAL GLY LEU ALA GLU SER VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 10.46 7.73 8.76 8.01 7.84 5.84 5.09 5.42 3.80 </line>
<line>SER CA 9.36 6.03 5.64 5.04 5.20 5.26 5.60 3.82 </line>
<line>GLU CA 12.91 9.74 8.72 7.34 5.24 5.53 3.79 </line>
<line>ALA CA 14.68 11.36 10.73 8.42 5.94 3.81 </line>
<line>LEU CA 13.47 9.85 8.72 5.63 3.79 </line>
<line>GLY CA 13.11 9.42 6.98 3.78 </line>
<line>VAL CA 10.10 6.46 3.77 </line>
<line>LYS CA 6.93 3.78 </line>
<line>THR CA 3.73 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>VAL CA 431</line>
<line>SER CA 361</line>
<line>GLU CA 284</line>
<line>ALA CA 318</line>
<line>LEU CA 284</line>
<line>GLY CA 209</line>
<line>VAL CA 245</line>
<line>LYS CA 289</line>
<line>THR CA 409</line>
<line>ILE CA 448</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1E3D</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1E3DA</entryIDChain>
<sequence>INDCYADLGVKAI</sequence>
<secondary-structure>HHHHH E</secondary-structure>
<atom-coordinate>
<line>ATOM 1855 CA ILE A 133 26.068 7.124 46.165 1.00 18.01 C </line>
<line>ATOM 1874 CA ASN A 134 28.789 9.507 47.341 1.00 21.65 C </line>
<line>ATOM 1888 CA ASP A 135 28.101 8.594 50.986 1.00 24.70 C </line>
<line>ATOM 1900 CA CYS A 136 28.189 4.912 50.238 1.00 27.81 C </line>
<line>ATOM 1910 CA TYR A 137 31.244 4.749 47.937 1.00 26.21 C </line>
<line>ATOM 1931 CA ALA A 138 33.398 7.576 49.307 1.00 31.79 C </line>
<line>ATOM 1941 CA ASP A 139 35.878 4.965 50.514 1.00 41.64 C </line>
<line>ATOM 1953 CA LEU A 140 36.163 3.656 46.946 1.00 36.97 C </line>
<line>ATOM 1972 CA GLY A 141 37.182 7.030 45.578 1.00 38.44 C </line>
<line>ATOM 1979 CA VAL A 142 33.896 7.340 43.744 1.00 33.90 C </line>
<line>ATOM 1995 CA LYS A 143 33.041 11.011 43.318 1.00 35.25 C </line>
<line>ATOM 2017 CA ALA A 144 29.783 11.518 41.466 1.00 24.38 C </line>
<line>ATOM 2027 CA ILE A 145 28.324 14.788 40.264 1.00 18.82 C </line>
</atom-coordinate>
<distance-map>
<line> ILE ALA LYS VAL GLY LEU ASP ALA TYR CYS ASP ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 9.93 7.43 8.48 8.20 11.13 10.70 10.95 7.99 5.96 5.10 5.43 3.80 </line>
<line>ASN CA 8.84 6.29 6.04 6.61 8.93 9.42 9.00 5.37 5.39 5.47 3.82 </line>
<line>ASP CA 12.38 10.10 9.44 9.36 10.68 10.28 8.60 5.65 5.83 3.76 </line>
<line>CYS CA 14.04 11.10 10.42 8.98 10.35 8.72 7.69 5.92 3.83 </line>
<line>TYR CA 12.97 9.48 7.99 5.60 6.78 5.14 5.31 3.81 </line>
<line>ALA CA 12.63 9.49 6.91 5.59 5.34 5.35 3.80 </line>
<line>ASP CA 16.08 12.73 9.82 7.44 5.51 3.81 </line>
<line>LEU CA 15.17 11.51 8.78 5.38 3.78 </line>
<line>GLY CA 12.92 9.58 6.17 3.78 </line>
<line>VAL CA 9.93 6.29 3.79 </line>
<line>LYS CA 6.77 3.78 </line>
<line>ALA CA 3.78 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ILE CA 918</line>
<line>ASN CA 741</line>
<line>ASP CA 618</line>
<line>CYS CA 667</line>
<line>TYR CA 609</line>
<line>ALA CA 446</line>
<line>ASP CA 328</line>
<line>LEU CA 410</line>
<line>GLY CA 363</line>
<line>VAL CA 585</line>
<line>LYS CA 626</line>
<line>ALA CA 845</line>
<line>ILE CA 900</line>
</n14>
</entryChain>
<parallel>
<x>-2.36299991607666</x>
<y>25.676000595092773</y>
<z>40.42100143432617</z>
</parallel>
<rotation>
<x>0.28600001335144043</x>
<y>0.9509999752044678</y>
<z>0.11699999868869781</z>
<x>-0.781000018119812</x>
<y>0.1599999964237213</y>
<z>0.6039999723434448</z>
<x>0.5550000071525574</x>
<y>-0.2639999985694885</y>
<z>0.7889999747276306</z>
</rotation>
<rmsd>1.6766040325164795</rmsd>
<dmax>3.8316240310668945</dmax>
</indel>