NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1E3DA-3CUSC
confEVID 1E3DA-3CUSC
pdbIDA 1E3D
pdbIDB 3CUS
pdbChainA A
pdbChainB C
identity 0.625999987125397
indelSize 1
alignment <alignment>
<seq1>SRPSVVYLHAAECTGCSEALLRTYQPFIDTLILDTISLDYHETIMAAAGEAAEEALQAAVNGPDGFICLVEGAIPTGMDNKYGYIAGHTMYDICKNILPKAKAVVSIGTCACYGGIQAAKPNPTAAKGINDCYADLGVKAINVPGCPPNPLNMVGTLVAFLKGQKIELDEVGRPVMFFGQSVHDLCERRKHFDAGEFAPSFNSEEARKGWCLYDVGCKGPETYNNCPKVLFNETNWPVAAGHPCIGCSEPNFWDDMTPFYQN-</seq1>
<seq2>HRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEAL---GVKTINIPGCPPNPINFVGAVVHVLTKGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG</seq2>
<ss_1> EEEE HHHHHGGG HHHIIIII HHHHHHHHHHHH EEEEEEEEEE EEE EEEHHHHHHHGGG EEEEE EEE HHHHH EEE HHHHHHHHHH HHHH HHHHH HHHH GGG HHHH HHHH -</ss_1>
<ss_2> EEEE HHHHHGGG HHHHHH EE HHHHHHHHHHHH EEEEEEEEEE EEE EEEHHHHHHHHHH EEEE HHHHH GGG EEE HHHHH--- EEE HHHHHHHHHH GGG HHHH HHHH GGG HHHH HHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3CUS</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>3CUSC</entryIDChain>
<sequence>VSEAL---GVKTI</sequence>
<secondary-structure>HHHHH--- E</secondary-structure>
<atom-coordinate>
<line>ATOM 13262 CA VAL C 133 -18.242 -5.381 65.130 1.00 14.51 C </line>
<line>ATOM 13269 CA SER C 134 -19.858 -7.654 62.508 1.00 14.72 C </line>
<line>ATOM 13275 CA GLU C 135 -16.532 -9.359 61.751 1.00 16.61 C </line>
<line>ATOM 13284 CA ALA C 136 -16.134 -10.188 65.476 1.00 16.85 C </line>
<line>ATOM 13289 CA LEU C 137 -19.747 -10.833 66.479 1.00 17.22 C </line>
<line>ATOM 13297 CA GLY C 138 -21.335 -12.047 63.239 1.00 15.66 C </line>
<line>ATOM 13301 CA VAL C 139 -24.219 -9.595 63.649 1.00 16.83 C </line>
<line>ATOM 13308 CA LYS C 140 -25.579 -7.328 60.899 1.00 17.63 C </line>
<line>ATOM 13317 CA THR C 141 -24.779 -3.666 61.474 1.00 14.37 C </line>
<line>ATOM 13324 CA ILE C 142 -25.776 -0.361 59.945 1.00 13.97 C </line>
</atom-coordinate>
<distance-map>
<line> ILE THR LYS VAL GLY LEU ALA GLU SER VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 10.43 7.68 8.69 7.46 7.59 5.81 5.26 5.49 3.83 </line>
<line>SER CA 9.74 6.42 5.95 4.91 4.69 5.09 5.39 3.81 </line>
<line>GLU CA 13.03 10.02 9.31 7.92 5.70 5.90 3.84 </line>
<line>ALA CA 14.84 11.55 10.88 8.31 5.96 3.80 </line>
<line>LEU CA 13.74 10.09 8.80 5.44 3.81 </line>
<line>GLY CA 12.93 9.23 6.76 3.81 </line>
<line>VAL CA 10.07 6.34 3.81 </line>
<line>LYS CA 7.03 3.79 </line>
<line>THR CA 3.78 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>VAL CA 429</line>
<line>SER CA 353</line>
<line>GLU CA 289</line>
<line>ALA CA 306</line>
<line>LEU CA 288</line>
<line>GLY CA 210</line>
<line>VAL CA 265</line>
<line>LYS CA 292</line>
<line>THR CA 413</line>
<line>ILE CA 455</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1E3D</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1E3DA</entryIDChain>
<sequence>INDCYADLGVKAI</sequence>
<secondary-structure>HHHHH E</secondary-structure>
<atom-coordinate>
<line>ATOM 1855 CA ILE A 133 26.068 7.124 46.165 1.00 18.01 C </line>
<line>ATOM 1874 CA ASN A 134 28.789 9.507 47.341 1.00 21.65 C </line>
<line>ATOM 1888 CA ASP A 135 28.101 8.594 50.986 1.00 24.70 C </line>
<line>ATOM 1900 CA CYS A 136 28.189 4.912 50.238 1.00 27.81 C </line>
<line>ATOM 1910 CA TYR A 137 31.244 4.749 47.937 1.00 26.21 C </line>
<line>ATOM 1931 CA ALA A 138 33.398 7.576 49.307 1.00 31.79 C </line>
<line>ATOM 1941 CA ASP A 139 35.878 4.965 50.514 1.00 41.64 C </line>
<line>ATOM 1953 CA LEU A 140 36.163 3.656 46.946 1.00 36.97 C </line>
<line>ATOM 1972 CA GLY A 141 37.182 7.030 45.578 1.00 38.44 C </line>
<line>ATOM 1979 CA VAL A 142 33.896 7.340 43.744 1.00 33.90 C </line>
<line>ATOM 1995 CA LYS A 143 33.041 11.011 43.318 1.00 35.25 C </line>
<line>ATOM 2017 CA ALA A 144 29.783 11.518 41.466 1.00 24.38 C </line>
<line>ATOM 2027 CA ILE A 145 28.324 14.788 40.264 1.00 18.82 C </line>
</atom-coordinate>
<distance-map>
<line> ILE ALA LYS VAL GLY LEU ASP ALA TYR CYS ASP ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 9.93 7.43 8.48 8.20 11.13 10.70 10.95 7.99 5.96 5.10 5.43 3.80 </line>
<line>ASN CA 8.84 6.29 6.04 6.61 8.93 9.42 9.00 5.37 5.39 5.47 3.82 </line>
<line>ASP CA 12.38 10.10 9.44 9.36 10.68 10.28 8.60 5.65 5.83 3.76 </line>
<line>CYS CA 14.04 11.10 10.42 8.98 10.35 8.72 7.69 5.92 3.83 </line>
<line>TYR CA 12.97 9.48 7.99 5.60 6.78 5.14 5.31 3.81 </line>
<line>ALA CA 12.63 9.49 6.91 5.59 5.34 5.35 3.80 </line>
<line>ASP CA 16.08 12.73 9.82 7.44 5.51 3.81 </line>
<line>LEU CA 15.17 11.51 8.78 5.38 3.78 </line>
<line>GLY CA 12.92 9.58 6.17 3.78 </line>
<line>VAL CA 9.93 6.29 3.79 </line>
<line>LYS CA 6.77 3.78 </line>
<line>ALA CA 3.78 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ILE CA 918</line>
<line>ASN CA 741</line>
<line>ASP CA 618</line>
<line>CYS CA 667</line>
<line>TYR CA 609</line>
<line>ALA CA 446</line>
<line>ASP CA 328</line>
<line>LEU CA 410</line>
<line>GLY CA 363</line>
<line>VAL CA 585</line>
<line>LYS CA 626</line>
<line>ALA CA 845</line>
<line>ILE CA 900</line>
</n14>
</entryChain>
<parallel>
<x>-51.02000045776367</x>
<y>-16.582000732421875</y>
<z>16.72800064086914</z>
</parallel>
<rotation>
<x>-0.5699999928474426</x>
<y>-0.7919999957084656</y>
<z>-0.21699999272823334</z>
<x>-0.13199999928474426</x>
<y>0.3490000069141388</y>
<z>-0.9279999732971191</z>
<x>0.8109999895095825</x>
<y>-0.5009999871253967</y>
<z>-0.30399999022483826</z>
</rotation>
<rmsd>1.608454942703247</rmsd>
<dmax>3.848345994949341</dmax>
</indel>