NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1E3DC-1YQWA
confEVID 1E3DC-1YQWA
pdbIDA 1E3D
pdbIDB 1YQW
pdbChainA C
pdbChainB A
identity 0.625999987125397
indelSize 1
alignment <alignment>
<seq1>--SRPSVVYLHAAECTGCSEALLRTYQPFIDTLILDTISLDYHETIMAAAGEAAEEALQAAVNGPDGFICLVEGAIPTGMDNKYGYIAGHTMYDICKNILPKAKAVVSIGTCACYGGIQAAKPNPTAAKGINDCYADLGVKAINVPGCPPNPLNMVGTLVAFLKGQKIELDEVGRPVMFFGQSVHDLCERRKHFDAGEFAPSFNSEEARKGWCLYDVGCKGPETYNNCPKVLFNETNWPVAAGHPCIGCSEPNFWDDMTPFYQN-</seq1>
<seq2>AKHRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEAL---GVKTINIPGCPPNPINFVGAVVHVLTKGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG</seq2>
<ss_1>-- EEEE HHHHHGGG HHHIIIII HHHHHHHHHHHH EEEEEEEEEE EEE EEEHHHHHHHGGG EEEEE HHHHH GGG EEE HHHHH EEE HHHHHHHHHH HHHH HHHHH HHHH GGG HHHH HHHH -</ss_1>
<ss_2> EEEEE HHHHHGGG HHHHHH HHHHHHHHHHHH EEEEEEEEEEE EEE EEEHHHHHHHHH EEEE HHHHH GGG EEE HHHH --- EEE HHHHHHHHHH GGG HHHH HHHH GGG HHHH HHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1YQW</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1YQWA</entryIDChain>
<sequence>VSEAL---GVKTI</sequence>
<secondary-structure>HHHH --- E</secondary-structure>
<atom-coordinate>
<line>ATOM 950 CA VAL A 133 1.190 20.571 4.857 1.00 7.69 C </line>
<line>ATOM 957 CA SER A 134 1.721 23.948 3.177 1.00 8.20 C </line>
<line>ATOM 963 CA GLU A 135 -0.956 23.134 0.619 1.00 12.35 C </line>
<line>ATOM 972 CA ALA A 136 -3.393 21.711 3.176 1.00 14.67 C </line>
<line>ATOM 977 CA LEU A 137 -2.994 24.530 5.697 1.00 10.51 C </line>
<line>ATOM 985 CA GLY A 138 -2.255 27.417 3.331 1.00 8.75 C </line>
<line>ATOM 989 CA VAL A 139 0.806 28.511 5.318 1.00 11.33 C </line>
<line>ATOM 996 CA LYS A 140 4.548 28.575 4.656 1.00 9.97 C </line>
<line>ATOM 1005 CA THR A 141 6.601 25.719 6.064 1.00 9.68 C </line>
<line>ATOM 1012 CA ILE A 142 10.312 25.087 6.511 1.00 6.67 C </line>
</atom-coordinate>
<distance-map>
<line> ILE THR LYS VAL GLY LEU ALA GLU SER VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 10.31 7.57 8.68 7.96 7.81 5.82 5.01 5.40 3.81 </line>
<line>SER CA 9.29 5.94 5.62 5.12 5.28 5.38 5.58 3.79 </line>
<line>GLU CA 12.86 9.67 8.73 7.36 5.23 5.65 3.81 </line>
<line>ALA CA 14.50 11.15 10.60 8.27 5.82 3.80 </line>
<line>LEU CA 13.34 9.68 8.62 5.52 3.81 </line>
<line>GLY CA 13.17 9.42 7.03 3.81 </line>
<line>VAL CA 10.17 6.48 3.80 </line>
<line>LYS CA 6.99 3.79 </line>
<line>THR CA 3.79 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>VAL CA 432</line>
<line>SER CA 358</line>
<line>GLU CA 282</line>
<line>ALA CA 322</line>
<line>LEU CA 290</line>
<line>GLY CA 204</line>
<line>VAL CA 244</line>
<line>LYS CA 286</line>
<line>THR CA 402</line>
<line>ILE CA 451</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1E3D</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1E3DC</entryIDChain>
<sequence>INDCYADLGVKAI</sequence>
<secondary-structure>HHHHH E</secondary-structure>
<atom-coordinate>
<line>ATOM 14067 CA ILE C 133 50.812 38.905 3.387 1.00 20.99 C </line>
<line>ATOM 14086 CA ASN C 134 53.937 37.601 5.098 1.00 29.62 C </line>
<line>ATOM 14100 CA ASP C 135 52.852 34.001 4.439 1.00 31.20 C </line>
<line>ATOM 14112 CA CYS C 136 51.859 34.681 0.875 1.00 27.51 C </line>
<line>ATOM 14122 CA TYR C 137 54.943 36.637 -0.255 1.00 29.96 C </line>
<line>ATOM 14143 CA ALA C 138 57.746 35.295 1.942 1.00 32.07 C </line>
<line>ATOM 14153 CA ASP C 139 59.194 33.537 -1.095 1.00 36.96 C </line>
<line>ATOM 14165 CA LEU C 140 59.251 36.925 -2.845 1.00 41.47 C </line>
<line>ATOM 14184 CA GLY C 141 61.221 38.278 0.082 1.00 39.11 C </line>
<line>ATOM 14191 CA VAL C 142 58.458 40.532 1.405 1.00 31.38 C </line>
<line>ATOM 14207 CA LYS C 143 58.735 41.161 5.160 1.00 31.89 C </line>
<line>ATOM 14229 CA ALA C 144 55.857 43.206 6.585 1.00 21.53 C </line>
<line>ATOM 14239 CA ILE C 145 55.380 44.666 10.060 1.00 23.76 C </line>
</atom-coordinate>
<distance-map>
<line> ILE ALA LYS VAL GLY LEU ASP ALA TYR CYS ASP ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 9.93 7.36 8.43 8.06 10.94 10.68 10.92 7.95 5.96 5.02 5.41 3.79 </line>
<line>ASN CA 8.75 6.11 5.97 6.53 8.87 9.58 9.08 5.46 5.53 5.54 3.82 </line>
<line>ASP CA 12.32 9.92 9.29 9.13 10.36 10.13 8.43 5.64 5.78 3.76 </line>
<line>CYS CA 14.02 11.01 10.37 8.84 10.06 8.57 7.68 6.01 3.82 </line>
<line>TYR CA 13.08 9.53 8.01 5.50 6.50 5.03 5.33 3.81 </line>
<line>ALA CA 12.62 9.37 6.76 5.31 4.94 5.28 3.80 </line>
<line>ASP CA 16.21 12.79 9.87 7.46 5.29 3.81 </line>
<line>LEU CA 15.54 11.83 9.07 5.63 3.78 </line>
<line>GLY CA 13.21 9.76 6.35 3.80 </line>
<line>VAL CA 10.07 6.38 3.82 </line>
<line>LYS CA 6.90 3.81 </line>
<line>ALA CA 3.80 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ILE CA 916</line>
<line>ASN CA 745</line>
<line>ASP CA 620</line>
<line>CYS CA 668</line>
<line>TYR CA 603</line>
<line>ALA CA 450</line>
<line>ASP CA 326</line>
<line>LEU CA 411</line>
<line>GLY CA 370</line>
<line>VAL CA 580</line>
<line>LYS CA 627</line>
<line>ALA CA 845</line>
<line>ILE CA 893</line>
</n14>
</entryChain>
<parallel>
<x>-55.51900100708008</x>
<y>-12.925000190734863</y>
<z>1.3300000429153442</z>
</parallel>
<rotation>
<x>-0.041999999433755875</x>
<y>0.9779999852180481</y>
<z>-0.20499999821186066</z>
<x>0.6029999852180481</x>
<y>0.18799999356269836</y>
<z>0.7749999761581421</z>
<x>0.7960000038146973</x>
<y>-0.09099999815225601</y>
<z>-0.5979999899864197</z>
</rotation>
<rmsd>1.59299898147583</rmsd>
<dmax>3.6622509956359863</dmax>
</indel>