NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1E3DC-1YQWB
confEVID 1E3DC-1YQWB
pdbIDA 1E3D
pdbIDB 1YQW
pdbChainA C
pdbChainB B
identity 0.625999987125397
indelSize 1
alignment <alignment>
<seq1>--SRPSVVYLHAAECTGCSEALLRTYQPFIDTLILDTISLDYHETIMAAAGEAAEEALQAAVNGPDGFICLVEGAIPTGMDNKYGYIAGHTMYDICKNILPKAKAVVSIGTCACYGGIQAAKPNPTAAKGINDCYADLGVKAINVPGCPPNPLNMVGTLVAFLKGQKIELDEVGRPVMFFGQSVHDLCERRKHFDAGEFAPSFNSEEARKGWCLYDVGCKGPETYNNCPKVLFNETNWPVAAGHPCIGCSEPNFWDDMTPFYQN-</seq1>
<seq2>AKHRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEAL---GVKTINIPGCPPNPINFVGAVVHVLTKGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG</seq2>
<ss_1>-- EEEE HHHHHGGG HHHIIIII HHHHHHHHHHHH EEEEEEEEEE EEE EEEHHHHHHHGGG EEEEE HHHHH GGG EEE HHHHH EEE HHHHHHHHHH HHHH HHHHH HHHH GGG HHHH HHHH -</ss_1>
<ss_2> EEEE HHHHHGGG HHHHHH HHHHHHHHHHHH EEEEEEEEEE EEE EEEHHHHHHHHHH EEEEEHHHH GGG EEE HHHHH--- EEE HHHHHHHHHHHH GGGG HHHH HHHH GGG HHHH HHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1YQW</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1YQWB</entryIDChain>
<sequence>VSEAL---GVKTI</sequence>
<secondary-structure>HHHHH--- E</secondary-structure>
<atom-coordinate>
<line>ATOM 7117 CA VAL B 133 -47.749 -41.271 45.180 1.00 8.82 C </line>
<line>ATOM 7124 CA SER B 134 -51.127 -42.991 45.767 1.00 9.99 C </line>
<line>ATOM 7132 CA GLU B 135 -52.536 -39.882 47.459 1.00 12.93 C </line>
<line>ATOM 7141 CA ALA B 136 -51.802 -37.761 44.366 1.00 11.36 C </line>
<line>ATOM 7146 CA LEU B 137 -52.386 -40.248 41.532 1.00 10.58 C </line>
<line>ATOM 7154 CA GLY B 138 -54.971 -42.711 42.911 1.00 14.11 C </line>
<line>ATOM 7158 CA VAL B 139 -52.855 -45.697 41.873 1.00 15.82 C </line>
<line>ATOM 7165 CA LYS B 140 -52.267 -48.614 44.244 1.00 15.41 C </line>
<line>ATOM 7174 CA THR B 141 -48.643 -49.030 45.364 1.00 10.58 C </line>
<line>ATOM 7181 CA ILE B 142 -46.478 -51.523 47.248 1.00 9.91 C </line>
</atom-coordinate>
<distance-map>
<line> ILE THR LYS VAL GLY LEU ALA GLU SER VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 10.54 7.81 8.67 7.52 7.71 5.99 5.42 5.48 3.84 </line>
<line>SER CA 9.83 6.54 5.94 5.05 4.80 5.20 5.46 3.81 </line>
<line>GLU CA 13.12 10.16 9.31 8.07 5.88 5.94 3.82 </line>
<line>ALA CA 15.03 11.75 10.86 8.38 6.05 3.82 </line>
<line>LEU CA 13.95 10.29 8.80 5.48 3.83 </line>
<line>GLY CA 12.98 9.27 6.63 3.80 </line>
<line>VAL CA 10.17 6.41 3.80 </line>
<line>LYS CA 7.14 3.82 </line>
<line>THR CA 3.80 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>VAL CA 431</line>
<line>SER CA 354</line>
<line>GLU CA 292</line>
<line>ALA CA 305</line>
<line>LEU CA 279</line>
<line>GLY CA 208</line>
<line>VAL CA 264</line>
<line>LYS CA 295</line>
<line>THR CA 415</line>
<line>ILE CA 450</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1E3D</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1E3DC</entryIDChain>
<sequence>INDCYADLGVKAI</sequence>
<secondary-structure>HHHHH E</secondary-structure>
<atom-coordinate>
<line>ATOM 14067 CA ILE C 133 50.812 38.905 3.387 1.00 20.99 C </line>
<line>ATOM 14086 CA ASN C 134 53.937 37.601 5.098 1.00 29.62 C </line>
<line>ATOM 14100 CA ASP C 135 52.852 34.001 4.439 1.00 31.20 C </line>
<line>ATOM 14112 CA CYS C 136 51.859 34.681 0.875 1.00 27.51 C </line>
<line>ATOM 14122 CA TYR C 137 54.943 36.637 -0.255 1.00 29.96 C </line>
<line>ATOM 14143 CA ALA C 138 57.746 35.295 1.942 1.00 32.07 C </line>
<line>ATOM 14153 CA ASP C 139 59.194 33.537 -1.095 1.00 36.96 C </line>
<line>ATOM 14165 CA LEU C 140 59.251 36.925 -2.845 1.00 41.47 C </line>
<line>ATOM 14184 CA GLY C 141 61.221 38.278 0.082 1.00 39.11 C </line>
<line>ATOM 14191 CA VAL C 142 58.458 40.532 1.405 1.00 31.38 C </line>
<line>ATOM 14207 CA LYS C 143 58.735 41.161 5.160 1.00 31.89 C </line>
<line>ATOM 14229 CA ALA C 144 55.857 43.206 6.585 1.00 21.53 C </line>
<line>ATOM 14239 CA ILE C 145 55.380 44.666 10.060 1.00 23.76 C </line>
</atom-coordinate>
<distance-map>
<line> ILE ALA LYS VAL GLY LEU ASP ALA TYR CYS ASP ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 9.93 7.36 8.43 8.06 10.94 10.68 10.92 7.95 5.96 5.02 5.41 3.79 </line>
<line>ASN CA 8.75 6.11 5.97 6.53 8.87 9.58 9.08 5.46 5.53 5.54 3.82 </line>
<line>ASP CA 12.32 9.92 9.29 9.13 10.36 10.13 8.43 5.64 5.78 3.76 </line>
<line>CYS CA 14.02 11.01 10.37 8.84 10.06 8.57 7.68 6.01 3.82 </line>
<line>TYR CA 13.08 9.53 8.01 5.50 6.50 5.03 5.33 3.81 </line>
<line>ALA CA 12.62 9.37 6.76 5.31 4.94 5.28 3.80 </line>
<line>ASP CA 16.21 12.79 9.87 7.46 5.29 3.81 </line>
<line>LEU CA 15.54 11.83 9.07 5.63 3.78 </line>
<line>GLY CA 13.21 9.76 6.35 3.80 </line>
<line>VAL CA 10.07 6.38 3.82 </line>
<line>LYS CA 6.90 3.81 </line>
<line>ALA CA 3.80 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ILE CA 916</line>
<line>ASN CA 745</line>
<line>ASP CA 620</line>
<line>CYS CA 668</line>
<line>TYR CA 603</line>
<line>ALA CA 450</line>
<line>ASP CA 326</line>
<line>LEU CA 411</line>
<line>GLY CA 370</line>
<line>VAL CA 580</line>
<line>LYS CA 627</line>
<line>ALA CA 845</line>
<line>ILE CA 893</line>
</n14>
</entryChain>
<parallel>
<x>-107.31400299072266</x>
<y>-80.12100219726562</y>
<z>41.643001556396484</z>
</parallel>
<rotation>
<x>-0.8140000104904175</x>
<y>-0.5559999942779541</y>
<z>-0.16899999976158142</z>
<x>0.5669999718666077</x>
<y>-0.6940000057220459</y>
<z>-0.4440000057220459</z>
<x>0.1289999932050705</x>
<y>-0.4569999873638153</y>
<z>0.8799999952316284</z>
</rotation>
<rmsd>1.470533013343811</rmsd>
<dmax>3.548067092895508</dmax>
</indel>