NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1E3DC-3CUSC
confEVID 1E3DC-3CUSC
pdbIDA 1E3D
pdbIDB 3CUS
pdbChainA C
pdbChainB C
identity 0.625999987125397
indelSize 1
alignment <alignment>
<seq1>SRPSVVYLHAAECTGCSEALLRTYQPFIDTLILDTISLDYHETIMAAAGEAAEEALQAAVNGPDGFICLVEGAIPTGMDNKYGYIAGHTMYDICKNILPKAKAVVSIGTCACYGGIQAAKPNPTAAKGINDCYADLGVKAINVPGCPPNPLNMVGTLVAFLKGQKIELDEVGRPVMFFGQSVHDLCERRKHFDAGEFAPSFNSEEARKGWCLYDVGCKGPETYNNCPKVLFNETNWPVAAGHPCIGCSEPNFWDDMTPFYQN-</seq1>
<seq2>HRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEAL---GVKTINIPGCPPNPINFVGAVVHVLTKGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG</seq2>
<ss_1> EEEE HHHHHGGG HHHIIIII HHHHHHHHHHHH EEEEEEEEEE EEE EEEHHHHHHHGGG EEEEE HHHHH GGG EEE HHHHH EEE HHHHHHHHHH HHHH HHHHH HHHH GGG HHHH HHHH -</ss_1>
<ss_2> EEEE HHHHHGGG HHHHHH EE HHHHHHHHHHHH EEEEEEEEEE EEE EEEHHHHHHHHHH EEEE HHHHH GGG EEE HHHHH--- EEE HHHHHHHHHH GGG HHHH HHHH GGG HHHH HHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3CUS</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>3CUSC</entryIDChain>
<sequence>VSEAL---GVKTI</sequence>
<secondary-structure>HHHHH--- E</secondary-structure>
<atom-coordinate>
<line>ATOM 13262 CA VAL C 133 -18.242 -5.381 65.130 1.00 14.51 C </line>
<line>ATOM 13269 CA SER C 134 -19.858 -7.654 62.508 1.00 14.72 C </line>
<line>ATOM 13275 CA GLU C 135 -16.532 -9.359 61.751 1.00 16.61 C </line>
<line>ATOM 13284 CA ALA C 136 -16.134 -10.188 65.476 1.00 16.85 C </line>
<line>ATOM 13289 CA LEU C 137 -19.747 -10.833 66.479 1.00 17.22 C </line>
<line>ATOM 13297 CA GLY C 138 -21.335 -12.047 63.239 1.00 15.66 C </line>
<line>ATOM 13301 CA VAL C 139 -24.219 -9.595 63.649 1.00 16.83 C </line>
<line>ATOM 13308 CA LYS C 140 -25.579 -7.328 60.899 1.00 17.63 C </line>
<line>ATOM 13317 CA THR C 141 -24.779 -3.666 61.474 1.00 14.37 C </line>
<line>ATOM 13324 CA ILE C 142 -25.776 -0.361 59.945 1.00 13.97 C </line>
</atom-coordinate>
<distance-map>
<line> ILE THR LYS VAL GLY LEU ALA GLU SER VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 10.43 7.68 8.69 7.46 7.59 5.81 5.26 5.49 3.83 </line>
<line>SER CA 9.74 6.42 5.95 4.91 4.69 5.09 5.39 3.81 </line>
<line>GLU CA 13.03 10.02 9.31 7.92 5.70 5.90 3.84 </line>
<line>ALA CA 14.84 11.55 10.88 8.31 5.96 3.80 </line>
<line>LEU CA 13.74 10.09 8.80 5.44 3.81 </line>
<line>GLY CA 12.93 9.23 6.76 3.81 </line>
<line>VAL CA 10.07 6.34 3.81 </line>
<line>LYS CA 7.03 3.79 </line>
<line>THR CA 3.78 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>VAL CA 429</line>
<line>SER CA 353</line>
<line>GLU CA 289</line>
<line>ALA CA 306</line>
<line>LEU CA 288</line>
<line>GLY CA 210</line>
<line>VAL CA 265</line>
<line>LYS CA 292</line>
<line>THR CA 413</line>
<line>ILE CA 455</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1E3D</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1E3DC</entryIDChain>
<sequence>INDCYADLGVKAI</sequence>
<secondary-structure>HHHHH E</secondary-structure>
<atom-coordinate>
<line>ATOM 14067 CA ILE C 133 50.812 38.905 3.387 1.00 20.99 C </line>
<line>ATOM 14086 CA ASN C 134 53.937 37.601 5.098 1.00 29.62 C </line>
<line>ATOM 14100 CA ASP C 135 52.852 34.001 4.439 1.00 31.20 C </line>
<line>ATOM 14112 CA CYS C 136 51.859 34.681 0.875 1.00 27.51 C </line>
<line>ATOM 14122 CA TYR C 137 54.943 36.637 -0.255 1.00 29.96 C </line>
<line>ATOM 14143 CA ALA C 138 57.746 35.295 1.942 1.00 32.07 C </line>
<line>ATOM 14153 CA ASP C 139 59.194 33.537 -1.095 1.00 36.96 C </line>
<line>ATOM 14165 CA LEU C 140 59.251 36.925 -2.845 1.00 41.47 C </line>
<line>ATOM 14184 CA GLY C 141 61.221 38.278 0.082 1.00 39.11 C </line>
<line>ATOM 14191 CA VAL C 142 58.458 40.532 1.405 1.00 31.38 C </line>
<line>ATOM 14207 CA LYS C 143 58.735 41.161 5.160 1.00 31.89 C </line>
<line>ATOM 14229 CA ALA C 144 55.857 43.206 6.585 1.00 21.53 C </line>
<line>ATOM 14239 CA ILE C 145 55.380 44.666 10.060 1.00 23.76 C </line>
</atom-coordinate>
<distance-map>
<line> ILE ALA LYS VAL GLY LEU ASP ALA TYR CYS ASP ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 9.93 7.36 8.43 8.06 10.94 10.68 10.92 7.95 5.96 5.02 5.41 3.79 </line>
<line>ASN CA 8.75 6.11 5.97 6.53 8.87 9.58 9.08 5.46 5.53 5.54 3.82 </line>
<line>ASP CA 12.32 9.92 9.29 9.13 10.36 10.13 8.43 5.64 5.78 3.76 </line>
<line>CYS CA 14.02 11.01 10.37 8.84 10.06 8.57 7.68 6.01 3.82 </line>
<line>TYR CA 13.08 9.53 8.01 5.50 6.50 5.03 5.33 3.81 </line>
<line>ALA CA 12.62 9.37 6.76 5.31 4.94 5.28 3.80 </line>
<line>ASP CA 16.21 12.79 9.87 7.46 5.29 3.81 </line>
<line>LEU CA 15.54 11.83 9.07 5.63 3.78 </line>
<line>GLY CA 13.21 9.76 6.35 3.80 </line>
<line>VAL CA 10.07 6.38 3.82 </line>
<line>LYS CA 6.90 3.81 </line>
<line>ALA CA 3.80 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ILE CA 916</line>
<line>ASN CA 745</line>
<line>ASP CA 620</line>
<line>CYS CA 668</line>
<line>TYR CA 603</line>
<line>ALA CA 450</line>
<line>ASP CA 326</line>
<line>LEU CA 411</line>
<line>GLY CA 370</line>
<line>VAL CA 580</line>
<line>LYS CA 627</line>
<line>ALA CA 845</line>
<line>ILE CA 893</line>
</n14>
</entryChain>
<parallel>
<x>-75.55799865722656</x>
<y>-46.77299880981445</y>
<z>61.117000579833984</z>
</parallel>
<rotation>
<x>-0.652999997138977</x>
<y>-0.6150000095367432</y>
<z>-0.4429999887943268</z>
<x>-0.7549999952316284</x>
<y>0.5770000219345093</y>
<z>0.31299999356269836</z>
<x>0.06300000101327896</x>
<y>0.5379999876022339</y>
<z>-0.8399999737739563</z>
</rotation>
<rmsd>1.5256409645080566</rmsd>
<dmax>3.64593505859375</dmax>
</indel>