NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1E4WH-2ATKA
confEVID 1E4WH-2ATKA
pdbIDA 1E4W
pdbIDB 2ATK
pdbChainA H
pdbChainB A
identity 0.815699994564056
indelSize 1
alignment <alignment>
<seq1>QVQLQQPGAELVKPGASVKLSCKASGFTFTNYWMHWVKQRPGQGLEWIGEILPSNGRTNYNEKFKTKATLTVDKSSNTAYMQLSSLTSEDSAVYYCARSPS----DYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP--</seq1>
<seq2>QVQLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANYNEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERGDGYFAVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRD</seq2>
<ss_1> EEE EEE EEEEEEEE EEEEEEE EEEEEEE EEEEEGGG EEEEEEE EEEEEEE GGG EEEEEEEE ---- EEEE EEEEE EEEEEEEEEEEEE EEEEE EEE EEE EEEEEEEEEE EEEEEEE EEEEE --</ss_1>
<ss_2> EEE EEE EEEEEE EEEEEEE EEEEEEE EEE EEEEE EEEEEEE GGG EEEEEEEE EEEE EEEEE EEEEEEEEEEEEE EEEEE EEE EEEEEEEEEEEE EEEEEE EEEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1E4W</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1E4WH</entryIDChain>
<sequence>ARSPS----DYWGQ</sequence>
<secondary-structure>EEE ---- </secondary-structure>
<atom-coordinate>
<line>ATOM 757 CA ALA H 93 29.816 18.328 -27.917 1.00 25.15 C </line>
<line>ATOM 762 CA ARG H 94 28.284 16.648 -24.878 1.00 26.57 C </line>
<line>ATOM 773 CA SER H 95 24.783 15.442 -24.200 1.00 25.65 C </line>
<line>ATOM 779 CA PRO H 96 22.424 15.579 -22.224 1.00 27.95 C </line>
<line>ATOM 786 CA SER H 97 22.583 19.255 -20.951 1.00 32.29 C </line>
<line>ATOM 792 CA ASP H 98 24.234 19.929 -24.273 1.00 27.76 C </line>
<line>ATOM 800 CA TYR H 99 27.320 22.071 -24.623 1.00 30.09 C </line>
<line>ATOM 812 CA TRP H 100 29.557 22.470 -27.669 1.00 23.23 C </line>
<line>ATOM 826 CA GLY H 101 33.260 23.148 -28.239 1.00 25.82 C </line>
<line>ATOM 830 CA GLN H 102 34.264 26.112 -30.471 1.00 27.97 C </line>
</atom-coordinate>
<distance-map>
<line> GLN GLY TRP TYR ASP SER PRO SER ARG ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 9.32 5.93 4.16 5.58 6.86 10.08 9.73 6.89 3.80 </line>
<line>ARG CA 12.51 8.85 6.58 5.51 5.25 7.40 6.52 3.76 </line>
<line>SER CA 15.59 12.15 9.18 7.11 4.52 5.47 3.08 </line>
<line>PRO CA 17.86 14.52 11.31 8.48 5.14 3.89 </line>
<line>SER CA 16.56 13.50 10.20 6.62 3.77 </line>
<line>ASP CA 13.31 10.37 6.81 3.77 </line>
<line>TYR CA 9.94 7.04 3.80 </line>
<line>TRP CA 6.58 3.81 </line>
<line>GLY CA 3.84 </line>
<line>GLN CA </line>
</distance-map>
<n14>
<line>ALA CA 445</line>
<line>ARG CA 396</line>
<line>SER CA 298</line>
<line>PRO CA 215</line>
<line>SER CA 186</line>
<line>ASP CA 246</line>
<line>TYR CA 283</line>
<line>TRP CA 352</line>
<line>GLY CA 362</line>
<line>GLN CA 269</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2ATK</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2ATKA</entryIDChain>
<sequence>ARERGDGYFAVWGA</sequence>
<secondary-structure>EEE </secondary-structure>
<atom-coordinate>
<line>ATOM 749 CA ALA A 97 138.349 125.994 -17.382 1.00 42.93 C </line>
<line>ATOM 754 CA ARG A 98 137.919 127.209 -20.906 1.00 47.02 C </line>
<line>ATOM 765 CA GLU A 99 139.186 130.446 -22.347 1.00 43.97 C </line>
<line>ATOM 774 CA ARG A 100 138.309 131.592 -25.856 1.00 47.29 C </line>
<line>ATOM 785 CA GLY A 101 141.613 133.428 -26.080 1.00 45.87 C </line>
<line>ATOM 789 CA ASP A 102 140.175 136.702 -24.837 1.00 43.21 C </line>
<line>ATOM 797 CA GLY A 103 141.355 136.485 -21.244 1.00 42.55 C </line>
<line>ATOM 801 CA TYR A 104 138.541 135.174 -19.033 1.00 45.00 C </line>
<line>ATOM 813 CA PHE A 105 137.429 131.730 -17.893 1.00 47.54 C </line>
<line>ATOM 824 CA ALA A 106 133.904 131.480 -19.298 1.00 50.44 C </line>
<line>ATOM 829 CA VAL A 107 133.181 127.948 -18.077 1.00 51.49 C </line>
<line>ATOM 836 CA TRP A 108 134.750 125.800 -15.346 1.00 52.66 C </line>
<line>ATOM 850 CA GLY A 109 134.561 122.135 -14.439 1.00 52.77 C </line>
<line>ATOM 854 CA ALA A 110 133.399 120.838 -11.059 1.00 52.07 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLY TRP VAL ALA PHE TYR GLY ASP GLY ARG GLU ARG ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 9.54 6.16 4.14 5.57 7.32 5.83 9.33 11.58 13.17 11.90 10.16 6.72 3.75 </line>
<line>ARG CA 12.57 8.88 6.55 5.57 6.08 5.46 8.21 9.90 10.52 8.89 6.62 3.76 </line>
<line>GLU CA 15.91 12.37 9.50 7.78 6.19 4.96 5.81 6.51 6.81 5.36 3.79 </line>
<line>ARG CA 18.94 15.29 12.52 10.00 7.90 8.01 7.71 7.38 5.53 3.79 </line>
<line>GLY CA 21.25 17.69 14.85 12.85 10.45 9.35 7.88 5.73 3.79 </line>
<line>ASP CA 22.08 18.76 15.44 13.09 9.86 8.97 6.22 3.79 </line>
<line>GLY CA 20.29 17.27 13.88 12.24 9.18 7.02 3.81 </line>
<line>TYR CA 17.19 14.39 10.76 9.05 5.93 3.79 </line>
<line>PHE CA 13.48 10.59 6.99 5.69 3.80 </line>
<line>ALA CA 13.47 10.55 6.97 3.81 </line>
<line>VAL CA 9.99 7.00 3.81 </line>
<line>TRP CA 6.70 3.78 </line>
<line>GLY CA 3.80 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ALA CA 436</line>
<line>ARG CA 406</line>
<line>GLU CA 328</line>
<line>ARG CA 266</line>
<line>GLY CA 239</line>
<line>ASP CA 166</line>
<line>GLY CA 190</line>
<line>TYR CA 204</line>
<line>PHE CA 281</line>
<line>ALA CA 250</line>
<line>VAL CA 298</line>
<line>TRP CA 344</line>
<line>GLY CA 333</line>
<line>ALA CA 305</line>
</n14>
</entryChain>
<parallel>
<x>-111.0260009765625</x>
<y>-110.52200317382812</y>
<z>-3.930000066757202</z>
</parallel>
<rotation>
<x>-0.23100000619888306</x>
<y>-0.8930000066757202</y>
<z>-0.3869999945163727</z>
<x>-0.9649999737739563</x>
<y>0.25999999046325684</y>
<z>-0.02500000037252903</z>
<x>0.12300000339746475</x>
<y>0.36800000071525574</y>
<z>-0.921999990940094</z>
</rotation>
<rmsd>2.6261849403381348</rmsd>
<dmax>5.873569011688232</dmax>
</indel>