NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1A4FA-2ZLWD
confEVID 1A4FA-2ZLWD
pdbIDA 1A4F
pdbIDB 2ZLW
pdbChainA A
pdbChainB D
identity 0.374099999666214
indelSize 1
alignment <alignment>
<seq1>-VLSAADKTNVKGVFSKISGHAEEYGAETLERMFTAYPQTKTYFPHFD------LQHGSAQIKAHGKKVVAALVEAVNHIDDIAGALSKLSDLHAQKLRVDPVNFKFLGHCFLVVVAIHHPSALTAEVHASLDKFLCAVGTVLTAKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKV--NEEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHHH HHHHHHHHHHHHHHH GGGG ------ HHHHHHHHHHHHHHHHHH HHHH HHHHHIIIII HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHH -- HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>LWDKV--NEEEV</sequence>
<secondary-structure>H -- HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3356 CA LEU D 14 -35.699 13.034 19.487 1.00 17.31 C </line>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
</atom-coordinate>
<distance-map>
<line> VAL GLU GLU GLU ASN VAL LYS ASP TRP LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 12.60 14.60 15.52 12.19 10.17 6.46 5.35 5.31 3.83 </line>
<line>TRP CA 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.30 5.54 3.81 </line>
<line>GLU CA 5.65 3.79 </line>
<line>GLU CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LEU CA 322</line>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1A4F</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1A4FA</entryIDChain>
<sequence>VFSKISGHAEEY</sequence>
<secondary-structure>HHHHH HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 85 CA VAL A 13 57.316 15.817 45.903 1.00 34.92 C </line>
<line>ATOM 92 CA PHE A 14 54.307 17.698 47.439 1.00 35.46 C </line>
<line>ATOM 103 CA SER A 15 56.630 20.003 49.378 1.00 49.29 C </line>
<line>ATOM 109 CA LYS A 16 58.094 21.224 46.060 1.00 41.49 C </line>
<line>ATOM 118 CA ILE A 17 54.558 21.730 44.719 1.00 48.94 C </line>
<line>ATOM 126 CA SER A 18 52.764 22.835 47.895 1.00 58.60 C </line>
<line>ATOM 132 CA GLY A 19 54.143 26.327 47.081 1.00 50.69 C </line>
<line>ATOM 136 CA HIS A 20 52.506 26.762 43.548 1.00 46.27 C </line>
<line>ATOM 146 CA ALA A 21 49.007 25.183 43.769 1.00 33.29 C </line>
<line>ATOM 151 CA GLU A 22 47.370 27.652 41.535 1.00 33.92 C </line>
<line>ATOM 160 CA GLU A 23 49.861 27.759 38.676 1.00 21.23 C </line>
<line>ATOM 169 CA TYR A 24 50.205 23.905 38.865 1.00 28.99 C </line>
</atom-coordinate>
<distance-map>
<line> TYR GLU GLU ALA HIS GLY SER ILE LYS SER PHE VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 12.87 15.82 16.06 12.70 12.19 11.04 8.60 6.63 5.46 5.48 3.87 </line>
<line>PHE CA 11.35 14.06 13.49 9.88 10.03 8.64 5.38 4.87 5.35 3.80 </line>
<line>SER CA 12.92 14.85 14.34 10.79 9.83 7.17 5.02 5.38 3.83 </line>
<line>LYS CA 11.01 12.85 13.30 10.17 8.26 6.53 5.86 3.82 </line>
<line>ILE CA 7.61 9.74 9.84 6.61 5.56 5.18 3.81 </line>
<line>SER CA 9.45 10.85 9.63 6.05 5.86 3.84 </line>
<line>GLY CA 9.43 9.54 8.85 6.22 3.92 </line>
<line>HIS CA 5.95 5.63 5.59 3.85 </line>
<line>ALA CA 5.21 5.77 3.71 </line>
<line>GLU CA 5.40 3.79 </line>
<line>GLU CA 3.87 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>VAL CA 357</line>
<line>PHE CA 366</line>
<line>SER CA 255</line>
<line>LYS CA 269</line>
<line>ILE CA 338</line>
<line>SER CA 277</line>
<line>GLY CA 211</line>
<line>HIS CA 259</line>
<line>ALA CA 306</line>
<line>GLU CA 289</line>
<line>GLU CA 305</line>
<line>TYR CA 375</line>
</n14>
</entryChain>
<parallel>
<x>-90.60800170898438</x>
<y>-10.039999961853027</y>
<z>-19.165000915527344</z>
</parallel>
<rotation>
<x>-0.6949999928474426</x>
<y>-0.09200000017881393</y>
<z>-0.7129999995231628</z>
<x>-0.7009999752044678</x>
<y>-0.13300000131130219</y>
<z>0.699999988079071</z>
<x>-0.1599999964237213</x>
<y>0.9869999885559082</y>
<z>0.02800000086426735</z>
</rotation>
<rmsd>0.8198639750480652</rmsd>
<dmax>1.6670299768447876</dmax>
</indel>