NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1EP7B-1FAAA
confEVID 1EP7B-1FAAA
pdbIDA 1EP7
pdbIDB 1FAA
pdbChainA B
pdbChainB A
identity 0.321399986743927
indelSize 2
alignment <alignment>
<seq1>-------------GGSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVD-VDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKHAAA</seq1>
<seq2>LELALGTQEMEAIVGKVTEVN-KDTFWPIVKAA--GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS-</seq2>
<ss_1>------------- EEE HHHHHHHHHHHHH EEEEEE HHHH HHHHHHHHHH EEEEE-HHHHHHHHHH EEEEEE EEE HHHHHHHHHHHH </ss_1>
<ss_2> HHHHH EEE - HHHHHGGG-- EEEEEE HHHH HHHHHHHHHH - EEEEE HHHHHHH EEEEEE EEE EEHHHHHHHHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1EP7</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1EP7B</entryIDChain>
<sequence>FLKVD-VDAVA</sequence>
<secondary-structure>EEEEE-HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1263 CA PHE B 59 15.700 9.497 17.066 1.00 21.43 C </line>
<line>ATOM 1274 CA LEU B 60 19.118 10.832 18.015 1.00 21.63 C </line>
<line>ATOM 1282 CA LYS B 61 21.251 10.535 21.128 1.00 20.63 C </line>
<line>ATOM 1291 CA VAL B 62 23.815 13.126 22.116 1.00 19.50 C </line>
<line>ATOM 1298 CA ASP B 63 26.134 12.421 25.020 1.00 23.94 C </line>
<line>ATOM 1306 CA VAL B 64 27.108 15.922 26.176 1.00 25.95 C </line>
<line>ATOM 1313 CA ASP B 65 30.496 14.592 27.343 1.00 35.91 C </line>
<line>ATOM 1321 CA ALA B 66 31.408 13.294 23.884 1.00 33.38 C </line>
<line>ATOM 1326 CA VAL B 67 30.013 16.127 21.736 1.00 28.64 C </line>
<line>ATOM 1333 CA ALA B 68 30.297 19.414 23.668 1.00 27.31 C </line>
</atom-coordinate>
<distance-map>
<line> ALA VAL ALA ASP VAL ASP VAL LYS LEU PHE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>PHE CA 18.84 16.45 17.54 18.72 15.95 13.44 10.22 6.96 3.79 </line>
<line>LEU CA 15.18 12.67 13.84 15.19 12.50 10.04 6.64 3.79 </line>
<line>LYS CA 12.93 10.41 10.88 11.86 9.42 6.52 3.78 </line>
<line>VAL CA 9.16 6.90 7.80 8.61 5.93 3.78 </line>
<line>ASP CA 8.25 6.29 5.47 5.40 3.81 </line>
<line>VAL CA 5.35 5.31 5.54 3.82 </line>
<line>ASP CA 6.07 5.83 3.81 </line>
<line>ALA CA 6.22 3.82 </line>
<line>VAL CA 3.82 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>PHE CA 448</line>
<line>LEU CA 462</line>
<line>LYS CA 432</line>
<line>VAL CA 415</line>
<line>ASP CA 344</line>
<line>VAL CA 305</line>
<line>ASP CA 223</line>
<line>ALA CA 212</line>
<line>VAL CA 251</line>
<line>ALA CA 232</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1FAA</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1FAAA</entryIDChain>
<sequence>FLKLDCNQENK</sequence>
<secondary-structure>EEEEE H</secondary-structure>
<atom-coordinate>
<line>ATOM 524 CA PHE A 68 2.979 -2.349 11.455 1.00 22.60 C </line>
<line>ATOM 535 CA LEU A 69 4.007 1.257 10.857 1.00 20.71 C </line>
<line>ATOM 543 CA LYS A 70 2.940 4.104 8.620 1.00 26.14 C </line>
<line>ATOM 552 CA LEU A 71 4.811 7.082 7.130 1.00 25.95 C </line>
<line>ATOM 560 CA ASP A 72 3.281 10.259 5.715 1.00 27.49 C </line>
<line>ATOM 568 CA CYS A 73 5.333 10.930 2.618 1.00 30.62 C </line>
<line>ATOM 574 CA ASN A 74 5.458 14.714 2.926 1.00 40.09 C </line>
<line>ATOM 582 CA GLN A 75 8.099 17.485 3.052 1.00 48.95 C </line>
<line>ATOM 591 CA GLU A 76 9.592 16.713 6.460 1.00 45.04 C </line>
<line>ATOM 600 CA ASN A 77 9.967 12.995 5.543 1.00 34.85 C </line>
<line>ATOM 608 CA LYS A 78 11.121 13.517 1.964 1.00 38.04 C </line>
</atom-coordinate>
<distance-map>
<line> LYS ASN GLU GLN ASN CYS ASP LEU LYS LEU PHE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>PHE CA 20.20 17.87 20.79 22.14 19.24 16.12 13.86 10.54 7.05 3.80 </line>
<line>LEU CA 16.73 14.20 17.01 18.47 15.69 12.78 10.39 6.96 3.77 </line>
<line>LYS CA 14.14 11.74 14.42 15.38 12.30 9.40 6.81 3.82 </line>
<line>LEU CA 10.39 8.00 10.77 11.65 8.74 5.95 3.80 </line>
<line>ASP CA 9.28 7.23 9.06 9.08 5.69 3.78 </line>
<line>CYS CA 6.37 5.86 8.15 7.13 3.80 </line>
<line>ASN CA 5.87 5.49 5.79 3.83 </line>
<line>GLN CA 5.11 5.46 3.80 </line>
<line>GLU CA 5.72 3.85 </line>
<line>ASN CA 3.80 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>PHE CA 471</line>
<line>LEU CA 472</line>
<line>LYS CA 462</line>
<line>LEU CA 430</line>
<line>ASP CA 363</line>
<line>CYS CA 338</line>
<line>ASN CA 257</line>
<line>GLN CA 185</line>
<line>GLU CA 190</line>
<line>ASN CA 266</line>
<line>LYS CA 244</line>
</n14>
</entryChain>
<parallel>
<x>19.232999801635742</x>
<y>3.86899995803833</y>
<z>15.567000389099121</z>
</parallel>
<rotation>
<x>0.5630000233650208</x>
<y>0.4690000116825104</y>
<z>-0.6809999942779541</z>
<x>0.8109999895095825</x>
<y>-0.15299999713897705</y>
<z>0.5649999976158142</z>
<x>0.16099999845027924</x>
<y>-0.8700000047683716</y>
<z>-0.4659999907016754</z>
</rotation>
<rmsd>1.8481999635696411</rmsd>
<dmax>2.509330987930298</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1FAA</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1FAAA</entryIDChain>
<sequence>VTEVN-KDTFW</sequence>
<secondary-structure> EEE - HH</secondary-structure>
<atom-coordinate>
<line>ATOM 119 CA VAL A 17 -0.356 0.715 13.842 1.00 24.41 C </line>
<line>ATOM 126 CA THR A 18 2.235 3.338 14.672 1.00 23.50 C </line>
<line>ATOM 133 CA GLU A 19 2.952 6.415 12.628 1.00 26.34 C </line>
<line>ATOM 142 CA VAL A 20 6.672 7.161 12.384 1.00 26.01 C </line>
<line>ATOM 149 CA ASN A 21 8.791 9.966 10.887 1.00 35.19 C </line>
<line>ATOM 157 CA LYS A 22 12.257 10.133 9.288 1.00 37.83 C </line>
<line>ATOM 166 CA ASP A 23 13.672 10.280 12.828 1.00 36.94 C </line>
<line>ATOM 174 CA THR A 24 11.804 7.422 14.543 1.00 32.44 C </line>
<line>ATOM 181 CA PHE A 25 11.646 4.941 11.686 1.00 25.75 C </line>
<line>ATOM 192 CA TRP A 26 15.097 3.329 11.910 1.00 25.37 C </line>
</atom-coordinate>
<distance-map>
<line> TRP PHE THR ASP LYS ASN VAL GLU THR VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 15.79 12.91 13.90 17.01 16.39 13.34 9.65 6.70 3.78 </line>
<line>THR CA 13.16 10.00 10.40 13.51 13.25 10.06 6.29 3.76 </line>
<line>GLU CA 12.55 8.87 9.11 11.40 10.56 7.05 3.80 </line>
<line>VAL CA 9.27 5.49 5.57 7.68 7.04 3.82 </line>
<line>ASN CA 9.21 5.83 5.38 5.26 3.82 </line>
<line>LYS CA 7.83 5.75 5.93 3.82 </line>
<line>ASP CA 7.15 5.82 3.82 </line>
<line>THR CA 5.88 3.79 </line>
<line>PHE CA 3.82 </line>
<line>TRP CA </line>
</distance-map>
<n14>
<line>VAL CA 349</line>
<line>THR CA 344</line>
<line>GLU CA 348</line>
<line>VAL CA 349</line>
<line>ASN CA 303</line>
<line>LYS CA 285</line>
<line>ASP CA 248</line>
<line>THR CA 302</line>
<line>PHE CA 395</line>
<line>TRP CA 345</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1EP7</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1EP7B</entryIDChain>
<sequence>VIVIDSKAAWD</sequence>
<secondary-structure> EEE HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 841 CA VAL B 4 18.533 5.342 18.204 1.00 21.49 C </line>
<line>ATOM 848 CA ILE B 5 21.362 6.938 16.233 1.00 19.15 C </line>
<line>ATOM 856 CA VAL B 6 24.196 8.112 18.431 1.00 21.56 C </line>
<line>ATOM 863 CA ILE B 7 25.829 11.356 17.375 1.00 20.71 C </line>
<line>ATOM 871 CA ASP B 8 29.603 11.327 17.843 1.00 26.07 C </line>
<line>ATOM 879 CA SER B 9 30.488 14.559 16.029 1.00 24.24 C </line>
<line>ATOM 885 CA LYS B 10 29.336 18.004 14.919 1.00 23.53 C </line>
<line>ATOM 894 CA ALA B 11 29.456 16.874 11.291 1.00 21.00 C </line>
<line>ATOM 899 CA ALA B 12 27.213 13.879 11.984 1.00 20.12 C </line>
<line>ATOM 904 CA TRP B 13 24.833 16.184 13.796 1.00 19.61 C </line>
<line>ATOM 918 CA ASP B 14 24.552 18.551 10.806 1.00 20.78 C </line>
</atom-coordinate>
<distance-map>
<line> ASP TRP ALA ALA LYS SER ASP ILE VAL ILE VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 16.29 13.29 13.67 17.32 16.97 15.25 12.59 9.49 6.31 3.80 </line>
<line>ILE CA 13.21 10.17 10.02 13.74 13.70 11.89 9.47 6.39 3.77 </line>
<line>VAL CA 12.93 9.33 9.16 12.47 11.69 9.32 6.32 3.78 </line>
<line>ILE CA 9.83 6.09 6.11 8.98 7.91 5.81 3.80 </line>
<line>ASP CA 11.28 7.92 6.82 8.59 7.29 3.81 </line>
<line>SER CA 8.86 6.29 5.25 5.37 3.80 </line>
<line>LYS CA 6.33 4.99 5.49 3.80 </line>
<line>ALA CA 5.21 5.30 3.81 </line>
<line>ALA CA 5.50 3.78 </line>
<line>TRP CA 3.82 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>VAL CA 318</line>
<line>ILE CA 323</line>
<line>VAL CA 307</line>
<line>ILE CA 313</line>
<line>ASP CA 225</line>
<line>SER CA 209</line>
<line>LYS CA 217</line>
<line>ALA CA 171</line>
<line>ALA CA 219</line>
<line>TRP CA 323</line>
<line>ASP CA 265</line>
</n14>
</entryChain>
<parallel>
<x>-18.437999725341797</x>
<y>-4.550000190734863</y>
<z>-3.1510000228881836</z>
</parallel>
<rotation>
<x>0.15299999713897705</x>
<y>0.9879999756813049</y>
<z>0.019999999552965164</z>
<x>0.800000011920929</x>
<y>-0.1120000034570694</y>
<z>-0.5899999737739563</z>
<x>-0.5799999833106995</x>
<y>0.10599999874830246</y>
<z>-0.8069999814033508</z>
</rotation>
<rmsd>1.2151559591293335</rmsd>
<dmax>2.5073049068450928</dmax>
</indel>