NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1EUZE-1AUPA
confEVID 1EUZE-1AUPA
pdbIDA 1EUZ
pdbIDB 1AUP
pdbChainA E
pdbChainB A
identity 0.271899998188019
indelSize 3
alignment <alignment>
<seq1>-----------------IDPFEMAVKQLER----AAQYMDISEE---ALEWLKKPMRIVEVSVPIEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPAETLSTVKALATWMTWKVAVVDLPYGGGKGGIIVNPKELSEREQERLARAYIRAVYDVIGPWTDIPAPDVYTNPKIMGWMMDEYETIMRRKGPAFGVITGKPLSIGGSLGRGTATAQGAIFTIREAAKALGIDLKGKKIAVQGYGNAGYYTAKLAKEQLGMTVVAVSDSRGGIYNPDGL---DPDEVLKWKREHGSVKDFPGATNITNEELL--------------ELEVDVLAPAAIEEVITEKNADNI---KAKIVAEVANGPVTPEADDILREK-GILQIPDFLCNAGGVTVSYFEWVQNINGYYWTEEEVREKLDKKMTKAFWEVYNTHKDKNIH--MRDAAYVVAVSRVYQAMKDRGWVKK</seq1>
<seq2>SKYVDRVIAEVEKKYADEPEFVQTVEEVLSSLGPVVDAHP-EYEEVALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQFNGAIGPYLGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLRP--------------EATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNK---------VQDYADKFGVQFFPGEKPWGQKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVVGFE----------TAEEVDSKLHQVMTDIHDGSAAAAERYGLGYNLVAGANIVGFQKIADAMMAQGIAW-</seq2>
<ss_1>----------------- HHHHHHHHH----HGGG HH---HHHHH EEEEEEEEEEE EEEEEEEEEEEEE EE EE HHHHHHHHHHHHHHHHH EEEEEEE HHHHHHHHHHHHHHH EE HHHHHHHHHHHHHH HHHHHHHHHHHHHHHH EEEEE HHHHHHHHHHH EEEEEEE EEEEE --- HHHHHHHHHHH EEE HHHHH-------------- EEE GGG --- EEE HHHHHHH - EEE HHHH HHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHH --HHHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHHHH HHHHHHHHHH HHHGGG - HHHH HHHHH EEEEEEEEEEE EEEEEEEEEEEEE EEEEEE HHHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHHHHH -------------- HHHHHHHHHHHHHHHH EEEEE HHHHHHHHHHHHH- EEEEEEEEEEEEE HHHHHHHHHHH --------- HHHHHH EEE EEE HHHHHHHH EE HHHHHHHH EEE HHHHHGGG ---------- HHHHHHHHHHHHHHHHHHHHHHHH EEHHHHHHHHHHHHHHHHHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1EUZ</pdbID>
<pdbChain>E</pdbChain>
<entryIDChain>1EUZE</entryIDChain>
<sequence>NPDGL---DPDEV</sequence>
<secondary-structure>E --- HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 14777 CA ASN E 251 24.392 -77.227 145.103 1.00 25.13 C </line>
<line>ATOM 14785 CA PRO E 252 22.559 -77.755 148.413 1.00 27.98 C </line>
<line>ATOM 14792 CA ASP E 253 25.732 -78.193 150.419 1.00 29.03 C </line>
<line>ATOM 14800 CA GLY E 254 27.199 -74.962 149.089 1.00 30.27 C </line>
<line>ATOM 14804 CA LEU E 255 29.134 -73.536 146.151 1.00 27.14 C </line>
<line>ATOM 14812 CA ASP E 256 32.417 -71.735 146.811 1.00 26.17 C </line>
<line>ATOM 14820 CA PRO E 257 32.277 -68.445 144.873 1.00 25.39 C </line>
<line>ATOM 14827 CA ASP E 258 36.052 -68.385 144.161 1.00 25.16 C </line>
<line>ATOM 14835 CA GLU E 259 35.949 -71.928 142.744 1.00 22.75 C </line>
<line>ATOM 14844 CA VAL E 260 32.995 -70.995 140.580 1.00 21.59 C </line>
</atom-coordinate>
<distance-map>
<line> VAL GLU ASP PRO ASP LEU GLY ASP PRO ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 11.55 12.93 14.66 11.80 9.87 6.10 5.38 5.57 3.82 </line>
<line>PRO CA 14.70 15.66 16.97 13.92 11.66 8.13 5.46 3.78 </line>
<line>ASP CA 14.19 14.23 15.55 12.99 9.97 7.17 3.79 </line>
<line>GLY CA 11.03 11.23 12.08 9.28 6.54 3.80 </line>
<line>LEU CA 7.24 7.79 8.85 6.12 3.80 </line>
<line>ASP CA 6.30 5.39 5.61 3.82 </line>
<line>PRO CA 5.04 5.49 3.84 </line>
<line>ASP CA 5.38 3.82 </line>
<line>GLU CA 3.78 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ASN CA 312</line>
<line>PRO CA 250</line>
<line>ASP CA 215</line>
<line>GLY CA 320</line>
<line>LEU CA 390</line>
<line>ASP CA 366</line>
<line>PRO CA 411</line>
<line>ASP CA 308</line>
<line>GLU CA 305</line>
<line>VAL CA 384</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AUP</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AUPA</entryIDChain>
<sequence>DPEGITTEEKINY</sequence>
<secondary-structure> HHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1957 CA ASP A 268 -38.183 26.544 36.943 1.00 64.92 C </line>
<line>ATOM 1965 CA PRO A 269 -37.248 27.867 40.408 1.00 67.67 C </line>
<line>ATOM 1972 CA GLU A 270 -37.627 24.583 42.305 1.00 75.14 C </line>
<line>ATOM 1981 CA GLY A 271 -34.729 23.747 40.100 1.00 83.18 C </line>
<line>ATOM 1985 CA ILE A 272 -34.326 21.008 37.560 1.00 80.00 C </line>
<line>ATOM 1993 CA THR A 273 -32.861 18.870 40.378 1.00 58.90 C </line>
<line>ATOM 2000 CA THR A 274 -35.050 15.733 40.480 1.00100.00 C </line>
<line>ATOM 2007 CA GLU A 275 -34.408 12.288 39.029 1.00 86.51 C </line>
<line>ATOM 2016 CA GLU A 276 -37.643 12.826 37.113 1.00 57.67 C </line>
<line>ATOM 2025 CA LYS A 277 -37.353 16.457 36.007 1.00 34.14 C </line>
<line>ATOM 2034 CA ILE A 278 -34.017 15.650 34.346 1.00100.00 C </line>
<line>ATOM 2042 CA ASN A 279 -35.022 12.403 32.759 1.00100.00 C </line>
<line>ATOM 2050 CA TYR A 280 -37.529 14.467 30.859 1.00 62.85 C </line>
</atom-coordinate>
<distance-map>
<line> TYR ASN ILE LYS GLU GLU THR THR ILE GLY GLU PRO ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 13.54 15.08 11.95 10.16 13.73 14.89 11.80 9.95 6.78 5.45 5.74 3.83 </line>
<line>PRO CA 16.46 17.40 14.02 12.23 15.40 15.90 12.33 10.01 7.98 4.84 3.81 </line>
<line>GLU CA 15.28 15.69 12.50 10.28 12.85 13.12 9.40 7.69 6.80 3.74 </line>
<line>GLY CA 13.39 13.52 9.96 8.76 11.69 11.51 8.03 5.23 3.76 </line>
<line>ILE CA 9.90 9.88 6.26 5.68 8.84 8.84 6.07 3.83 </line>
<line>THR CA 11.48 10.22 6.93 6.72 8.37 6.89 3.83 </line>
<line>THR CA 10.02 8.41 6.22 5.08 5.15 3.79 </line>
<line>GLU CA 9.01 6.30 5.78 5.93 3.80 </line>
<line>GLU CA 6.47 5.10 5.36 3.81 </line>
<line>LYS CA 5.52 5.69 3.81 </line>
<line>ILE CA 5.09 3.75 </line>
<line>ASN CA 3.76 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>ASP CA 379</line>
<line>PRO CA 295</line>
<line>GLU CA 256</line>
<line>GLY CA 372</line>
<line>ILE CA 431</line>
<line>THR CA 345</line>
<line>THR CA 269</line>
<line>GLU CA 232</line>
<line>GLU CA 231</line>
<line>LYS CA 348</line>
<line>ILE CA 395</line>
<line>ASN CA 292</line>
<line>TYR CA 343</line>
</n14>
</entryChain>
<parallel>
<x>65.11100006103516</x>
<y>-94.86499786376953</y>
<z>108.77999877929688</z>
</parallel>
<rotation>
<x>0.6940000057220459</x>
<y>-0.6970000267028809</y>
<z>-0.1770000010728836</z>
<x>-0.7200000286102295</x>
<y>-0.6690000295639038</y>
<z>-0.18400000035762787</z>
<x>-0.009999999776482582</x>
<y>-0.25600001215934753</y>
<z>0.9670000076293945</z>
</rotation>
<rmsd>2.578329086303711</rmsd>
<dmax>4.8899312019348145</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1EUZ</pdbID>
<pdbChain>E</pdbChain>
<entryIDChain>1EUZE</entryIDChain>
<sequence>DKNIH--MRDAA</sequence>
<secondary-structure>H --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 15887 CA ASP E 390 6.019 -45.779 160.169 1.00 40.80 C </line>
<line>ATOM 15895 CA LYS E 391 4.358 -44.777 156.905 1.00 36.66 C </line>
<line>ATOM 15904 CA ASN E 392 3.312 -48.370 156.258 1.00 35.86 C </line>
<line>ATOM 15912 CA ILE E 393 4.571 -48.407 152.685 1.00 30.43 C </line>
<line>ATOM 15920 CA HIS E 394 6.549 -50.659 150.369 1.00 31.41 C </line>
<line>ATOM 15930 CA MET E 395 10.345 -50.444 150.900 1.00 26.45 C </line>
<line>ATOM 15938 CA ARG E 396 10.751 -48.909 147.423 1.00 27.44 C </line>
<line>ATOM 15949 CA ASP E 397 8.214 -46.149 147.986 1.00 31.61 C </line>
<line>ATOM 15957 CA ALA E 398 9.909 -45.410 151.312 1.00 24.11 C </line>
<line>ATOM 15962 CA ALA E 399 13.360 -45.037 149.677 1.00 29.47 C </line>
</atom-coordinate>
<distance-map>
<line> ALA ALA ASP ARG MET HIS ILE ASN LYS ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 12.83 9.68 12.38 13.95 11.24 10.96 8.06 5.42 3.80 </line>
<line>LYS CA 11.55 7.91 9.81 12.16 10.20 9.06 5.57 3.80 </line>
<line>ASN CA 12.47 8.76 9.87 11.56 9.08 7.10 3.79 </line>
<line>ILE CA 9.88 6.27 6.36 8.13 6.38 3.79 </line>
<line>HIS CA 8.86 6.30 5.37 5.42 3.84 </line>
<line>MET CA 6.31 5.07 5.61 3.82 </line>
<line>ARG CA 5.18 5.30 3.79 </line>
<line>ASP CA 5.53 3.81 </line>
<line>ALA CA 3.84 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ASP CA 189</line>
<line>LYS CA 217</line>
<line>ASN CA 236</line>
<line>ILE CA 315</line>
<line>HIS CA 405</line>
<line>MET CA 494</line>
<line>ARG CA 533</line>
<line>ASP CA 450</line>
<line>ALA CA 440</line>
<line>ALA CA 527</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AUP</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AUPA</entryIDChain>
<sequence>RYGLGYNLVAGA</sequence>
<secondary-structure>H EEHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3045 CA ARG A 419 2.375 35.416 33.468 1.00 49.22 C </line>
<line>ATOM 3056 CA TYR A 420 1.389 37.668 30.605 1.00 59.67 C </line>
<line>ATOM 3068 CA GLY A 421 -0.166 40.240 32.979 1.00 86.76 C </line>
<line>ATOM 3072 CA LEU A 422 -3.872 39.777 32.108 1.00 45.74 C </line>
<line>ATOM 3080 CA GLY A 423 -5.163 38.931 35.533 1.00100.00 C </line>
<line>ATOM 3084 CA TYR A 424 -7.803 36.200 35.760 1.00 37.78 C </line>
<line>ATOM 3096 CA ASN A 425 -8.636 35.980 32.064 1.00 67.22 C </line>
<line>ATOM 3104 CA LEU A 426 -9.722 32.409 31.544 1.00 19.40 C </line>
<line>ATOM 3112 CA VAL A 427 -10.451 33.169 27.875 1.00 17.00 C </line>
<line>ATOM 3119 CA ALA A 428 -7.017 34.445 26.855 1.00 20.09 C </line>
<line>ATOM 3124 CA GLY A 429 -5.354 31.943 29.152 1.00 13.42 C </line>
<line>ATOM 3128 CA ALA A 430 -6.958 29.055 27.342 1.00 30.82 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLY ALA VAL LEU ASN TYR GLY LEU GLY TYR ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 12.85 9.51 11.53 14.17 12.61 11.11 10.46 8.57 7.74 5.47 3.77 </line>
<line>TYR CA 12.43 8.96 9.75 12.96 12.33 10.27 10.64 8.30 5.86 3.83 </line>
<line>GLY CA 14.25 10.51 10.86 13.48 12.44 9.53 9.08 5.76 3.84 </line>
<line>LEU CA 12.13 8.50 8.12 10.24 9.42 6.09 6.45 3.76 </line>
<line>GLY CA 12.96 9.46 9.94 10.95 8.90 5.73 3.81 </line>
<line>TYR CA 11.07 8.23 9.11 8.85 5.99 3.80 </line>
<line>ASN CA 8.55 5.96 5.67 5.36 3.77 </line>
<line>LEU CA 6.05 5.00 5.78 3.82 </line>
<line>VAL CA 5.42 5.40 3.80 </line>
<line>ALA CA 5.41 3.78 </line>
<line>GLY CA 3.77 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ARG CA 207</line>
<line>TYR CA 237</line>
<line>GLY CA 175</line>
<line>LEU CA 249</line>
<line>GLY CA 237</line>
<line>TYR CA 333</line>
<line>ASN CA 409</line>
<line>LEU CA 491</line>
<line>VAL CA 537</line>
<line>ALA CA 448</line>
<line>GLY CA 425</line>
<line>ALA CA 515</line>
</n14>
</entryChain>
<parallel>
<x>10.843000411987305</x>
<y>-84.44400024414062</y>
<z>121.46600341796875</z>
</parallel>
<rotation>
<x>-0.23199999332427979</x>
<y>0.5220000147819519</y>
<z>0.8209999799728394</z>
<x>-0.9729999899864197</x>
<y>-0.12700000405311584</y>
<z>-0.1940000057220459</z>
<x>0.004000000189989805</x>
<y>-0.843999981880188</y>
<z>0.5370000004768372</z>
</rotation>
<rmsd>2.009213924407959</rmsd>
<dmax>4.178929805755615</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1AUP</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AUPA</entryIDChain>
<sequence>KLAEL-GAKAV</sequence>
<secondary-structure>HHHHH- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1812 CA LYS A 248 -23.922 17.275 38.015 1.00 68.88 C </line>
<line>ATOM 1821 CA LEU A 249 -25.049 20.695 39.152 1.00 43.44 C </line>
<line>ATOM 1829 CA ALA A 250 -28.043 19.170 40.913 1.00 31.79 C </line>
<line>ATOM 1834 CA GLU A 251 -25.792 16.557 42.482 1.00 57.23 C </line>
<line>ATOM 1843 CA LEU A 252 -23.238 19.136 43.523 1.00 40.22 C </line>
<line>ATOM 1851 CA GLY A 253 -25.524 21.640 45.271 1.00 70.00 C </line>
<line>ATOM 1855 CA ALA A 254 -26.665 24.019 42.544 1.00100.00 C </line>
<line>ATOM 1860 CA LYS A 255 -29.801 23.627 40.428 1.00100.00 C </line>
<line>ATOM 1869 CA ALA A 256 -30.928 24.568 36.931 1.00 54.26 C </line>
<line>ATOM 1874 CA VAL A 257 -33.870 26.951 36.491 1.00 55.76 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ALA LYS ALA GLY LEU GLU ALA LEU LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 13.96 10.17 8.99 8.57 8.62 5.85 4.90 5.38 3.78 </line>
<line>LEU CA 11.14 7.38 5.73 5.02 6.21 4.98 5.36 3.79 </line>
<line>ALA CA 10.68 7.30 4.82 5.30 5.61 5.47 3.79 </line>
<line>GLU CA 14.46 11.02 8.38 7.51 5.80 3.78 </line>
<line>LEU CA 14.95 11.49 8.53 6.05 3.81 </line>
<line>GLY CA 13.23 10.36 6.76 3.79 </line>
<line>ALA CA 9.86 7.07 3.80 </line>
<line>LYS CA 6.57 3.79 </line>
<line>ALA CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LYS CA 401</line>
<line>LEU CA 445</line>
<line>ALA CA 371</line>
<line>GLU CA 295</line>
<line>LEU CA 294</line>
<line>GLY CA 267</line>
<line>ALA CA 361</line>
<line>LYS CA 391</line>
<line>ALA CA 495</line>
<line>VAL CA 460</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1EUZ</pdbID>
<pdbChain>E</pdbChain>
<entryIDChain>1EUZE</entryIDChain>
<sequence>LAKEQLGMTVV</sequence>
<secondary-structure>HHH EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 14625 CA LEU E 230 31.051 -61.681 150.688 1.00 26.29 C </line>
<line>ATOM 14633 CA ALA E 231 27.756 -63.320 151.801 1.00 26.35 C </line>
<line>ATOM 14638 CA LYS E 232 29.707 -66.509 152.347 1.00 27.19 C </line>
<line>ATOM 14647 CA GLU E 233 32.874 -65.035 153.855 1.00 35.15 C </line>
<line>ATOM 14656 CA GLN E 234 31.288 -62.171 155.794 1.00 32.30 C </line>
<line>ATOM 14665 CA LEU E 235 27.641 -63.100 156.555 1.00 30.44 C </line>
<line>ATOM 14673 CA GLY E 236 28.542 -66.757 156.891 1.00 29.14 C </line>
<line>ATOM 14677 CA MET E 237 25.854 -67.872 154.493 1.00 27.27 C </line>
<line>ATOM 14685 CA THR E 238 25.770 -70.884 152.190 1.00 21.56 C </line>
<line>ATOM 14692 CA VAL E 239 25.705 -69.944 148.545 1.00 25.46 C </line>
<line>ATOM 14699 CA VAL E 240 23.488 -72.643 147.030 1.00 21.84 C </line>
</atom-coordinate>
<distance-map>
<line> VAL VAL THR MET GLY LEU GLN GLU LYS ALA LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 13.81 10.07 10.72 8.93 8.40 6.93 5.13 4.96 5.28 3.84 </line>
<line>ALA CA 11.31 7.66 7.83 5.62 6.19 4.76 5.45 5.78 3.78 </line>
<line>LYS CA 10.23 6.50 5.89 4.62 4.70 5.80 5.76 3.80 </line>
<line>GLU CA 13.88 10.18 9.35 7.60 5.56 6.20 3.80 </line>
<line>GLN CA 15.73 12.01 10.92 7.98 5.46 3.84 </line>
<line>LEU CA 14.11 10.71 9.12 5.50 3.78 </line>
<line>GLY CA 12.55 9.37 6.84 3.77 </line>
<line>MET CA 9.17 6.30 3.79 </line>
<line>THR CA 5.91 3.76 </line>
<line>VAL CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LEU CA 412</line>
<line>ALA CA 456</line>
<line>LYS CA 375</line>
<line>GLU CA 288</line>
<line>GLN CA 305</line>
<line>LEU CA 335</line>
<line>GLY CA 280</line>
<line>MET CA 350</line>
<line>THR CA 363</line>
<line>VAL CA 456</line>
<line>VAL CA 431</line>
</n14>
</entryChain>
<parallel>
<x>-55.11000061035156</x>
<y>85.79399871826172</y>
<z>-111.96600341796875</z>
</parallel>
<rotation>
<x>-0.15000000596046448</x>
<y>-0.949999988079071</y>
<z>0.27399998903274536</z>
<x>0.9269999861717224</x>
<y>-0.23199999332427979</y>
<z>-0.2939999997615814</z>
<x>0.34200000762939453</x>
<y>0.20999999344348907</y>
<z>0.9160000085830688</z>
</rotation>
<rmsd>0.9329569935798645</rmsd>
<dmax>1.5040309429168701</dmax>
</indel>