NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1EUZF-1AUPA
confEVID 1EUZF-1AUPA
pdbIDA 1EUZ
pdbIDB 1AUP
pdbChainA F
pdbChainB A
identity 0.256000012159348
indelSize 3
alignment <alignment>
<seq1>EIDPFEMAVKQLERAAQYMDISEEALE---------WLK--------------KPMRIVEVSVPIEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPAETLSTVKALATWMTWKVAVVDLPYGGGKGGIIVNPKELSEREQERLARAYIRAVYDVIGPWTDIPAPDVYTNPKIMGWMMDEYETIMRRKGPAFGVITGKPLSIGGSLGRGTATAQGAIFTIREAAKALGIDLKGKKIAVQGYGNAGYYTAKLAKEQLGMTVVAVSDSRGGIYNPDGL---DPDEVLKWKREHGSVKDFPGATNITNEELL--------------ELEVDVLAPAAIEEVITEKNADNIK---AKIVAEVANGPVTPEADDILREK-GILQIPDFLCNAGGVTVSYFEWVQNINGYYWTEEEVREKLDKKMTKAFWEVYNTHKDKNIH--MRDAAYVVAVSRVYQAMKDRGWVKK</seq1>
<seq2>-SKYVDRVIAEVEKKYADEPEFVQTVEEVLSSLGPVVDAHPEYEEVALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQFNGAIGPYLGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLR--------------PEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNK---------VQDYADKFGVQFFPGEKPWGQKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVVGFE----------TAEEVDSKLHQVMTDIHDGSAAAAERYGLGYNLVAGANIVGFQKIADAMMAQGIAW-</seq2>
<ss_1> HHHHHHHHHGGG HHHHH---------GGG-------------- EEEEEEEEEEE EEEEEEEEEEEEE EEEEEE HHHHHHHHHHHHHHHHH EEEEEEE HHHHHHHHHHHHHHH EEEE HHHHHHHHHHHHHH GGG HHHHHHHHHHHHHHHH EEEE HHHHHHHHHHH EEEEE EEEEE --- HHHHHHHHH EEE HHHHH-------------- EE HHHGGG --- EEE HHHHHHH - EEE HHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHH --HHHHHHHHHHHHHHHHHHH </ss_1>
<ss_2>- HHHHHHHHHHHH HHHHHHHHHH HHHGGG HHHH HHHHH EEEEEEEEEEE EEEEEEEEEEEEE EEEEEE HHHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHHHHH -------------- HHHHHHHHHHHHHHHH EEEEE HHHHHHHHHHHHH- EEEEEEEEEEEEE HHHHHHHHHHH --------- HHHHHH EEE EEE HHHHHHHH EE HHHHHHHH EEE HHHHHGGG ---------- HHHHHHHHHHHHHHHHHHHHHHHH EEHHHHHHHHHHHHHHHHHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1EUZ</pdbID>
<pdbChain>F</pdbChain>
<entryIDChain>1EUZF</entryIDChain>
<sequence>NPDGL---DPDEV</sequence>
<secondary-structure>E --- HH</secondary-structure>
<atom-coordinate>
<line>ATOM 18011 CA ASN F 251 81.932 -41.341 176.608 1.00 83.51 C </line>
<line>ATOM 18016 CA PRO F 252 80.164 -44.710 176.659 1.00 89.95 C </line>
<line>ATOM 18023 CA ASP F 253 78.324 -44.149 179.961 1.00 97.17 C </line>
<line>ATOM 18031 CA GLY F 254 75.855 -41.873 178.187 1.00 98.73 C </line>
<line>ATOM 18035 CA LEU F 255 76.132 -38.353 176.771 1.00 93.86 C </line>
<line>ATOM 18043 CA ASP F 256 73.234 -35.914 177.205 1.00 88.11 C </line>
<line>ATOM 18051 CA PRO F 257 72.327 -34.247 173.919 1.00 85.65 C </line>
<line>ATOM 18058 CA ASP F 258 71.014 -31.017 175.427 1.00 86.52 C </line>
<line>ATOM 18066 CA GLU F 259 73.934 -30.403 177.789 1.00 86.69 C </line>
<line>ATOM 18075 CA VAL F 260 76.129 -31.435 174.876 1.00 80.82 C </line>
</atom-coordinate>
<distance-map>
<line> VAL GLU ASP PRO ASP LEU GLY ASP PRO ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 11.61 13.60 15.07 12.24 10.27 6.53 6.30 5.67 3.81 </line>
<line>PRO CA 13.99 15.65 16.51 13.36 11.21 7.53 5.38 3.82 </line>
<line>ASP CA 13.87 14.59 15.70 13.06 10.07 6.97 3.80 </line>
<line>GLY CA 10.95 11.64 12.20 9.42 6.58 3.80 </line>
<line>LEU CA 7.17 8.31 9.05 6.28 3.81 </line>
<line>ASP CA 5.82 5.59 5.66 3.79 </line>
<line>PRO CA 4.82 5.69 3.80 </line>
<line>ASP CA 5.16 3.81 </line>
<line>GLU CA 3.79 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ASN CA 292</line>
<line>PRO CA 262</line>
<line>ASP CA 199</line>
<line>GLY CA 283</line>
<line>LEU CA 365</line>
<line>ASP CA 342</line>
<line>PRO CA 393</line>
<line>ASP CA 295</line>
<line>GLU CA 278</line>
<line>VAL CA 365</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AUP</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AUPA</entryIDChain>
<sequence>DPEGITTEEKINY</sequence>
<secondary-structure> HHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1957 CA ASP A 268 -38.183 26.544 36.943 1.00 64.92 C </line>
<line>ATOM 1965 CA PRO A 269 -37.248 27.867 40.408 1.00 67.67 C </line>
<line>ATOM 1972 CA GLU A 270 -37.627 24.583 42.305 1.00 75.14 C </line>
<line>ATOM 1981 CA GLY A 271 -34.729 23.747 40.100 1.00 83.18 C </line>
<line>ATOM 1985 CA ILE A 272 -34.326 21.008 37.560 1.00 80.00 C </line>
<line>ATOM 1993 CA THR A 273 -32.861 18.870 40.378 1.00 58.90 C </line>
<line>ATOM 2000 CA THR A 274 -35.050 15.733 40.480 1.00100.00 C </line>
<line>ATOM 2007 CA GLU A 275 -34.408 12.288 39.029 1.00 86.51 C </line>
<line>ATOM 2016 CA GLU A 276 -37.643 12.826 37.113 1.00 57.67 C </line>
<line>ATOM 2025 CA LYS A 277 -37.353 16.457 36.007 1.00 34.14 C </line>
<line>ATOM 2034 CA ILE A 278 -34.017 15.650 34.346 1.00100.00 C </line>
<line>ATOM 2042 CA ASN A 279 -35.022 12.403 32.759 1.00100.00 C </line>
<line>ATOM 2050 CA TYR A 280 -37.529 14.467 30.859 1.00 62.85 C </line>
</atom-coordinate>
<distance-map>
<line> TYR ASN ILE LYS GLU GLU THR THR ILE GLY GLU PRO ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 13.54 15.08 11.95 10.16 13.73 14.89 11.80 9.95 6.78 5.45 5.74 3.83 </line>
<line>PRO CA 16.46 17.40 14.02 12.23 15.40 15.90 12.33 10.01 7.98 4.84 3.81 </line>
<line>GLU CA 15.28 15.69 12.50 10.28 12.85 13.12 9.40 7.69 6.80 3.74 </line>
<line>GLY CA 13.39 13.52 9.96 8.76 11.69 11.51 8.03 5.23 3.76 </line>
<line>ILE CA 9.90 9.88 6.26 5.68 8.84 8.84 6.07 3.83 </line>
<line>THR CA 11.48 10.22 6.93 6.72 8.37 6.89 3.83 </line>
<line>THR CA 10.02 8.41 6.22 5.08 5.15 3.79 </line>
<line>GLU CA 9.01 6.30 5.78 5.93 3.80 </line>
<line>GLU CA 6.47 5.10 5.36 3.81 </line>
<line>LYS CA 5.52 5.69 3.81 </line>
<line>ILE CA 5.09 3.75 </line>
<line>ASN CA 3.76 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>ASP CA 379</line>
<line>PRO CA 295</line>
<line>GLU CA 256</line>
<line>GLY CA 372</line>
<line>ILE CA 431</line>
<line>THR CA 345</line>
<line>THR CA 269</line>
<line>GLU CA 232</line>
<line>GLU CA 231</line>
<line>LYS CA 348</line>
<line>ILE CA 395</line>
<line>ASN CA 292</line>
<line>TYR CA 343</line>
</n14>
</entryChain>
<parallel>
<x>112.51399993896484</x>
<y>-60.0359992980957</y>
<z>138.74400329589844</z>
</parallel>
<rotation>
<x>-0.6150000095367432</x>
<y>-0.4339999854564667</y>
<z>-0.6589999794960022</z>
<x>0.7110000252723694</x>
<y>-0.6660000085830688</y>
<z>-0.22499999403953552</z>
<x>-0.3409999907016754</x>
<y>-0.6060000061988831</y>
<z>0.7179999947547913</z>
</rotation>
<rmsd>2.6573660373687744</rmsd>
<dmax>4.373597145080566</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1EUZ</pdbID>
<pdbChain>F</pdbChain>
<entryIDChain>1EUZF</entryIDChain>
<sequence>DKNIH--MRDAA</sequence>
<secondary-structure>H --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 19100 CA ASP F 390 62.178 -60.331 148.045 1.00 60.39 C </line>
<line>ATOM 19108 CA LYS F 391 64.181 -58.848 145.193 1.00 59.22 C </line>
<line>ATOM 19117 CA ASN F 392 67.399 -59.647 147.064 1.00 59.18 C </line>
<line>ATOM 19125 CA ILE F 393 68.853 -56.229 146.356 1.00 50.85 C </line>
<line>ATOM 19133 CA HIS F 394 70.499 -53.590 148.511 1.00 51.63 C </line>
<line>ATOM 19143 CA MET F 395 68.241 -51.321 150.601 1.00 49.57 C </line>
<line>ATOM 19151 CA ARG F 396 69.065 -48.309 148.428 1.00 44.68 C </line>
<line>ATOM 19162 CA ASP F 397 68.023 -50.070 145.224 1.00 44.48 C </line>
<line>ATOM 19170 CA ALA F 398 64.877 -51.300 146.906 1.00 40.43 C </line>
<line>ATOM 19175 CA ALA F 399 64.020 -47.686 147.784 1.00 37.93 C </line>
</atom-coordinate>
<distance-map>
<line> ALA ALA ASP ARG MET HIS ILE ASN LYS ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 12.78 9.49 12.14 13.86 11.16 10.72 8.01 5.36 3.79 </line>
<line>LYS CA 11.46 7.77 9.58 12.06 10.12 8.86 5.48 3.81 </line>
<line>ASN CA 12.45 8.72 9.77 11.54 9.09 6.96 3.78 </line>
<line>ILE CA 9.92 6.36 6.32 8.19 6.52 3.78 </line>
<line>HIS CA 8.80 6.28 5.42 5.47 3.82 </line>
<line>MET CA 6.24 5.00 5.52 3.80 </line>
<line>ARG CA 5.12 5.37 3.80 </line>
<line>ASP CA 5.32 3.77 </line>
<line>ALA CA 3.82 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ASP CA 194</line>
<line>LYS CA 223</line>
<line>ASN CA 236</line>
<line>ILE CA 315</line>
<line>HIS CA 403</line>
<line>MET CA 493</line>
<line>ARG CA 523</line>
<line>ASP CA 463</line>
<line>ALA CA 444</line>
<line>ALA CA 527</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AUP</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AUPA</entryIDChain>
<sequence>RYGLGYNLVAGA</sequence>
<secondary-structure>H EEHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3045 CA ARG A 419 2.375 35.416 33.468 1.00 49.22 C </line>
<line>ATOM 3056 CA TYR A 420 1.389 37.668 30.605 1.00 59.67 C </line>
<line>ATOM 3068 CA GLY A 421 -0.166 40.240 32.979 1.00 86.76 C </line>
<line>ATOM 3072 CA LEU A 422 -3.872 39.777 32.108 1.00 45.74 C </line>
<line>ATOM 3080 CA GLY A 423 -5.163 38.931 35.533 1.00100.00 C </line>
<line>ATOM 3084 CA TYR A 424 -7.803 36.200 35.760 1.00 37.78 C </line>
<line>ATOM 3096 CA ASN A 425 -8.636 35.980 32.064 1.00 67.22 C </line>
<line>ATOM 3104 CA LEU A 426 -9.722 32.409 31.544 1.00 19.40 C </line>
<line>ATOM 3112 CA VAL A 427 -10.451 33.169 27.875 1.00 17.00 C </line>
<line>ATOM 3119 CA ALA A 428 -7.017 34.445 26.855 1.00 20.09 C </line>
<line>ATOM 3124 CA GLY A 429 -5.354 31.943 29.152 1.00 13.42 C </line>
<line>ATOM 3128 CA ALA A 430 -6.958 29.055 27.342 1.00 30.82 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLY ALA VAL LEU ASN TYR GLY LEU GLY TYR ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 12.85 9.51 11.53 14.17 12.61 11.11 10.46 8.57 7.74 5.47 3.77 </line>
<line>TYR CA 12.43 8.96 9.75 12.96 12.33 10.27 10.64 8.30 5.86 3.83 </line>
<line>GLY CA 14.25 10.51 10.86 13.48 12.44 9.53 9.08 5.76 3.84 </line>
<line>LEU CA 12.13 8.50 8.12 10.24 9.42 6.09 6.45 3.76 </line>
<line>GLY CA 12.96 9.46 9.94 10.95 8.90 5.73 3.81 </line>
<line>TYR CA 11.07 8.23 9.11 8.85 5.99 3.80 </line>
<line>ASN CA 8.55 5.96 5.67 5.36 3.77 </line>
<line>LEU CA 6.05 5.00 5.78 3.82 </line>
<line>VAL CA 5.42 5.40 3.80 </line>
<line>ALA CA 5.41 3.78 </line>
<line>GLY CA 3.77 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ARG CA 207</line>
<line>TYR CA 237</line>
<line>GLY CA 175</line>
<line>LEU CA 249</line>
<line>GLY CA 237</line>
<line>TYR CA 333</line>
<line>ASN CA 409</line>
<line>LEU CA 491</line>
<line>VAL CA 537</line>
<line>ALA CA 448</line>
<line>GLY CA 425</line>
<line>ALA CA 515</line>
</n14>
</entryChain>
<parallel>
<x>71.38300323486328</x>
<y>-91.30000305175781</y>
<z>116.05699920654297</z>
</parallel>
<rotation>
<x>-0.6909999847412109</x>
<y>-0.6869999766349792</y>
<z>-0.22300000488758087</z>
<x>0.6790000200271606</x>
<y>-0.5139999985694885</y>
<z>-0.5239999890327454</z>
<x>0.24500000476837158</x>
<y>-0.5139999985694885</y>
<z>0.8220000267028809</z>
</rotation>
<rmsd>1.9566669464111328</rmsd>
<dmax>4.06472110748291</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1AUP</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AUPA</entryIDChain>
<sequence>KLAEL-GAKAV</sequence>
<secondary-structure>HHHHH- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1812 CA LYS A 248 -23.922 17.275 38.015 1.00 68.88 C </line>
<line>ATOM 1821 CA LEU A 249 -25.049 20.695 39.152 1.00 43.44 C </line>
<line>ATOM 1829 CA ALA A 250 -28.043 19.170 40.913 1.00 31.79 C </line>
<line>ATOM 1834 CA GLU A 251 -25.792 16.557 42.482 1.00 57.23 C </line>
<line>ATOM 1843 CA LEU A 252 -23.238 19.136 43.523 1.00 40.22 C </line>
<line>ATOM 1851 CA GLY A 253 -25.524 21.640 45.271 1.00 70.00 C </line>
<line>ATOM 1855 CA ALA A 254 -26.665 24.019 42.544 1.00100.00 C </line>
<line>ATOM 1860 CA LYS A 255 -29.801 23.627 40.428 1.00100.00 C </line>
<line>ATOM 1869 CA ALA A 256 -30.928 24.568 36.931 1.00 54.26 C </line>
<line>ATOM 1874 CA VAL A 257 -33.870 26.951 36.491 1.00 55.76 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ALA LYS ALA GLY LEU GLU ALA LEU LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 13.96 10.17 8.99 8.57 8.62 5.85 4.90 5.38 3.78 </line>
<line>LEU CA 11.14 7.38 5.73 5.02 6.21 4.98 5.36 3.79 </line>
<line>ALA CA 10.68 7.30 4.82 5.30 5.61 5.47 3.79 </line>
<line>GLU CA 14.46 11.02 8.38 7.51 5.80 3.78 </line>
<line>LEU CA 14.95 11.49 8.53 6.05 3.81 </line>
<line>GLY CA 13.23 10.36 6.76 3.79 </line>
<line>ALA CA 9.86 7.07 3.80 </line>
<line>LYS CA 6.57 3.79 </line>
<line>ALA CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LYS CA 401</line>
<line>LEU CA 445</line>
<line>ALA CA 371</line>
<line>GLU CA 295</line>
<line>LEU CA 294</line>
<line>GLY CA 267</line>
<line>ALA CA 361</line>
<line>LYS CA 391</line>
<line>ALA CA 495</line>
<line>VAL CA 460</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1EUZ</pdbID>
<pdbChain>F</pdbChain>
<entryIDChain>1EUZF</entryIDChain>
<sequence>LAKEQLGMTVV</sequence>
<secondary-structure>HHH EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 17880 CA LEU F 230 65.123 -38.973 170.338 1.00 65.94 C </line>
<line>ATOM 17888 CA ALA F 231 67.458 -41.959 169.827 1.00 68.65 C </line>
<line>ATOM 17893 CA LYS F 232 68.062 -41.391 173.517 1.00 73.24 C </line>
<line>ATOM 17898 CA GLU F 233 64.856 -40.121 175.177 1.00 79.69 C </line>
<line>ATOM 17907 CA GLN F 234 62.581 -41.912 172.710 1.00 79.49 C </line>
<line>ATOM 17912 CA LEU F 235 64.394 -45.178 171.855 1.00 78.86 C </line>
<line>ATOM 17920 CA GLY F 236 66.194 -45.833 175.146 1.00 81.25 C </line>
<line>ATOM 17924 CA MET F 237 69.583 -45.819 173.445 1.00 80.11 C </line>
<line>ATOM 17932 CA THR F 238 72.853 -44.708 174.984 1.00 78.65 C </line>
<line>ATOM 17939 CA VAL F 239 74.312 -41.842 172.948 1.00 77.89 C </line>
<line>ATOM 17946 CA VAL F 240 77.972 -42.732 173.299 1.00 77.98 C </line>
</atom-coordinate>
<distance-map>
<line> VAL VAL THR MET GLY LEU GLN GLU LYS ALA LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 13.71 9.97 10.69 8.74 8.45 6.43 4.55 4.98 4.96 3.82 </line>
<line>ALA CA 11.10 7.53 7.95 5.70 6.70 4.88 5.67 6.23 3.78 </line>
<line>LYS CA 10.00 6.29 6.01 4.68 5.09 5.53 5.56 3.83 </line>
<line>GLU CA 13.50 9.87 9.22 7.60 5.87 6.07 3.80 </line>
<line>GLN CA 15.42 11.73 10.89 8.05 5.86 3.83 </line>
<line>LEU CA 13.87 10.52 9.03 5.46 3.81 </line>
<line>GLY CA 12.32 9.31 6.76 3.79 </line>
<line>MET CA 8.94 6.20 3.78 </line>
<line>THR CA 5.74 3.81 </line>
<line>VAL CA 3.78 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LEU CA 393</line>
<line>ALA CA 443</line>
<line>LYS CA 354</line>
<line>GLU CA 264</line>
<line>GLN CA 289</line>
<line>LEU CA 316</line>
<line>GLY CA 246</line>
<line>MET CA 329</line>
<line>THR CA 325</line>
<line>VAL CA 425</line>
<line>VAL CA 421</line>
</n14>
</entryChain>
<parallel>
<x>-93.09300231933594</x>
<y>62.854000091552734</y>
<z>-131.6020050048828</z>
</parallel>
<rotation>
<x>-0.7419999837875366</x>
<y>0.47600001096725464</y>
<z>-0.47099998593330383</z>
<x>-0.2240000069141388</x>
<y>-0.8389999866485596</y>
<z>-0.4959999918937683</z>
<x>-0.6320000290870667</x>
<y>-0.2619999945163727</y>
<z>0.7289999723434448</z>
</rotation>
<rmsd>1.0495929718017578</rmsd>
<dmax>1.7084280252456665</dmax>
</indel>