NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1F3WA-3G2GD
confEVID 1F3WA-3G2GD
pdbIDA 1F3W
pdbIDB 3G2G
pdbChainA A
pdbChainB D
identity 0.913100004196167
indelSize 1
alignment <alignment>
<seq1>IQTQQLHAAMADTFLEHMCRLDIDSAPITARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELARASSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPVQEAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq1>
<seq2>-QTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLI------EVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQV-----DFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRYAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq2>
<ss_1> HHHH HHHHHH EEEE HHHH HHHHHHHHH EEEEE HHHHHHHHHHHHHHHH HHHH EEEEE EE EEEEEE GGG EEE GGGGG EEEEEE EEEEEEE EEEEEEEE EEEE HHHHHHHHHHHH EEEE HHHHHHHHHHH GGG EEEE HHHHH HHHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH EE GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHHHH EEE HHHHHHHH EEEEE HHHHHGGGG HHHHHHHHHHHHHHHHHH EEEEEEE EEEEE </ss_1>
<ss_2>- HHHH HHHHHH EEEE HHHHHHHHH EEEEE HHHHHHHHHHHHHHHGGG EEEEE ------ EEE EEEEEE GGG EEE EEEEEE EEEEE----- EEEEEEEEEEE EEE HHHHHHHHHHHH EEEE HHHHHHHHHHH EEEE HHHHH HHHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH EE GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHHHH EEE HHHHHHGGG EEEEE HHHHHGGGG EEE HHHHHHHHHHHHHHHHHH EEEEEEEEEE EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3G2G</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>3G2GD</entryIDChain>
<sequence>ISLQV-----DFLVT</sequence>
<secondary-structure>EEEEE----- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 12056 CA ILE D 181 -43.734 16.846 40.002 1.00 47.65 C </line>
<line>ATOM 12064 CA SER D 182 -44.281 17.356 36.271 1.00 52.03 C </line>
<line>ATOM 12070 CA LEU D 183 -46.886 19.374 34.375 1.00 58.45 C </line>
<line>ATOM 12078 CA GLN D 184 -47.928 19.697 30.740 1.00 63.30 C </line>
<line>ATOM 12083 CA VAL D 185 -49.177 22.899 29.105 1.00 65.11 C </line>
<line>ATOM 12088 CA ASP D 191 -51.224 35.843 30.700 1.00 71.97 C </line>
<line>ATOM 12093 CA PHE D 192 -51.955 32.597 32.536 1.00 74.58 C </line>
<line>ATOM 12104 CA LEU D 193 -51.460 28.863 32.022 1.00 69.97 C </line>
<line>ATOM 12112 CA VAL D 194 -53.827 25.931 32.401 1.00 66.11 C </line>
<line>ATOM 12119 CA THR D 195 -52.048 22.595 32.792 1.00 67.29 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL LEU PHE ASP VAL GLN LEU SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.42 15.56 16.36 19.27 22.44 13.60 10.56 6.93 3.81 </line>
<line>SER CA 9.99 13.40 14.21 17.47 20.52 10.30 7.03 3.80 </line>
<line>LEU CA 6.29 9.75 10.79 14.28 17.42 6.74 3.80 </line>
<line>GLN CA 5.44 8.74 9.91 13.63 16.48 3.81 </line>
<line>VAL CA 4.68 6.46 7.02 10.66 13.20 </line>
<line>ASP CA 13.44 10.39 7.11 3.80 </line>
<line>PHE CA 10.01 6.93 3.80 </line>
<line>LEU CA 6.34 3.79 </line>
<line>VAL CA 3.80 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 311</line>
<line>SER CA 321</line>
<line>LEU CA 335</line>
<line>GLN CA 260</line>
<line>VAL CA 255</line>
<line>ASP CA 178</line>
<line>PHE CA 239</line>
<line>LEU CA 272</line>
<line>VAL CA 238</line>
<line>THR CA 278</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1F3W</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1F3WA</entryIDChain>
<sequence>ISLQVKQKGPDFLVT</sequence>
<secondary-structure>EEEEEEE EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1272 CA ILE A 180 -5.533 43.473 20.242 1.00 61.31 C </line>
<line>ATOM 1280 CA SER A 181 -1.915 44.369 19.563 1.00 67.79 C </line>
<line>ATOM 1286 CA LEU A 182 0.132 47.311 20.800 1.00 71.14 C </line>
<line>ATOM 1294 CA GLN A 183 3.554 48.628 19.816 1.00 77.92 C </line>
<line>ATOM 1303 CA VAL A 184 5.751 50.164 22.507 1.00 80.89 C </line>
<line>ATOM 1310 CA LYS A 185 6.491 53.636 21.134 1.00 84.46 C </line>
<line>ATOM 1319 CA GLN A 186 8.326 54.852 24.219 1.00 90.83 C </line>
<line>ATOM 1328 CA LYS A 187 9.869 53.310 27.331 1.00 94.19 C </line>
<line>ATOM 1337 CA GLY A 188 9.563 54.451 30.946 1.00 98.06 C </line>
<line>ATOM 1341 CA PRO A 189 10.445 53.589 34.590 1.00 99.83 C </line>
<line>ATOM 1348 CA ASP A 190 7.110 52.064 35.602 1.00 97.94 C </line>
<line>ATOM 1356 CA PHE A 191 5.118 52.938 32.477 1.00 93.58 C </line>
<line>ATOM 1367 CA LEU A 192 5.060 52.486 28.693 1.00 87.83 C </line>
<line>ATOM 1375 CA VAL A 193 3.341 54.556 26.022 1.00 85.83 C </line>
<line>ATOM 1382 CA THR A 194 2.248 52.480 23.037 1.00 83.47 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL LEU PHE ASP PRO GLY LYS GLN LYS VAL GLN LEU SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.23 15.33 16.27 18.78 21.67 23.74 21.52 19.60 18.37 15.77 13.31 10.46 6.87 3.79 </line>
<line>SER CA 9.76 13.16 14.07 17.02 19.95 21.53 19.05 16.71 15.38 12.61 10.05 6.94 3.79 </line>
<line>LEU CA 6.02 9.49 10.65 13.89 17.04 18.33 15.58 13.17 11.65 8.98 6.53 3.80 </line>
<line>GLN CA 5.19 8.58 9.80 13.47 16.54 17.04 13.92 10.88 8.99 5.95 3.80 </line>
<line>VAL CA 4.23 6.12 6.64 10.37 13.30 13.41 10.20 7.08 5.62 3.81 </line>
<line>LYS CA 4.79 5.89 7.78 11.45 14.57 14.02 10.31 7.07 3.79 </line>
<line>GLN CA 6.63 5.31 6.02 9.06 11.78 10.66 6.85 3.80 </line>
<line>LYS CA 8.79 6.77 5.07 7.01 8.81 7.29 3.80 </line>
<line>GLY CA 10.95 7.94 5.41 4.94 5.78 3.85 </line>
<line>PRO CA 14.21 11.17 8.06 5.77 3.80 </line>
<line>ASP CA 13.48 10.59 7.22 3.81 </line>
<line>PHE CA 9.88 6.89 3.81 </line>
<line>LEU CA 6.32 3.79 </line>
<line>VAL CA 3.80 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 348</line>
<line>SER CA 362</line>
<line>LEU CA 393</line>
<line>GLN CA 329</line>
<line>VAL CA 340</line>
<line>LYS CA 235</line>
<line>GLN CA 238</line>
<line>LYS CA 242</line>
<line>GLY CA 219</line>
<line>PRO CA 204</line>
<line>ASP CA 270</line>
<line>PHE CA 335</line>
<line>LEU CA 361</line>
<line>VAL CA 332</line>
<line>THR CA 362</line>
</n14>
</entryChain>
<parallel>
<x>-50.7400016784668</x>
<y>-24.7450008392334</y>
<z>8.255999565124512</z>
</parallel>
<rotation>
<x>0.09200000017881393</x>
<y>0.2759999930858612</y>
<z>-0.9570000171661377</z>
<x>-0.9959999918937683</x>
<y>0.04100000113248825</y>
<z>-0.08399999886751175</z>
<x>0.01600000075995922</x>
<y>0.9599999785423279</y>
<z>0.27900001406669617</z>
</rotation>
<rmsd>0.4337790012359619</rmsd>
<dmax>0.8164250254631042</dmax>
</indel>