NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1A4JH-3FCTD
confEVID 1A4JH-3FCTD
pdbIDA 1A4J
pdbIDB 3FCT
pdbChainA H
pdbChainB D
identity 0.751200020313263
indelSize 1
alignment <alignment>
<seq1>QVQLLESGPELKKPGETVKISCKASGYTFTNYGMNWVKQAPGKGLKWMGWINTYTGEPTYADDFKGRFAFSLETSASTAYLQINNLKNEDTATYFCVQAERLRRTFDYWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV----</seq1>
<seq2>QVQLLESGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGMIDPNSGGTKYNEKFKSKATLTVDKPSNTAYMQLSSLTSEDSAVYYCTR-----RDMDYWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKIVPKS</seq2>
<ss_1> EEE EEE EEEEEE GGG EEEEEEE EEEEEEEHHHHEEEEEGGG EEEEEEE EEEEEEE GGG EEEEEEEE EEEE EEEEE EEEEEEEEEEEEE EEEEE EEE EEEEEEE EEE EEEEEE EEEEE ----</ss_1>
<ss_2> EEE EEE EEEEEEEE GGG EEEEEEE EEEEEE EEEEEGGG EEEEEEE EEEEEEE GGG EEEEEEE----- EEEE EEEEE EEEEEEEEEEEEE EEEEE EEE EEEEEEEEEEE HHHH EEEEEEE EEEEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3FCT</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>3FCTD</entryIDChain>
<sequence>YYCTR-----RDMDY</sequence>
<secondary-structure>EEEEE----- </secondary-structure>
<atom-coordinate>
<line>ATOM 5636 CA TYR D 94 0.922 -24.381 50.916 1.00 28.20 C </line>
<line>ATOM 5648 CA TYR D 95 3.021 -21.292 50.336 1.00 26.92 C </line>
<line>ATOM 5660 CA CYS D 96 3.026 -18.532 47.784 1.00 29.25 C </line>
<line>ATOM 5666 CA THR D 97 6.393 -17.024 46.825 1.00 29.08 C </line>
<line>ATOM 5673 CA ARG D 98 7.356 -14.213 44.476 1.00 29.55 C </line>
<line>ATOM 5684 CA ARG D 99 9.133 -15.259 41.246 1.00 31.13 C </line>
<line>ATOM 5695 CA ASP D 100 12.635 -15.165 42.783 1.00 27.84 C </line>
<line>ATOM 5703 CA MET D 101 11.523 -16.959 45.955 1.00 30.07 C </line>
<line>ATOM 5711 CA ASP D 102 13.082 -14.328 48.200 1.00 30.44 C </line>
<line>ATOM 5719 CA TYR D 103 9.711 -13.507 49.824 1.00 27.23 C </line>
</atom-coordinate>
<distance-map>
<line> TYR ASP MET ASP ARG ARG THR CYS TYR TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 14.02 16.01 13.86 16.98 15.62 13.65 10.04 6.96 3.78 </line>
<line>TYR CA 10.28 12.42 10.50 13.68 12.51 10.16 6.47 3.76 </line>
<line>CYS CA 8.61 10.91 8.83 11.34 9.53 6.95 3.81 </line>
<line>THR CA 5.69 7.34 5.20 7.67 6.46 3.79 </line>
<line>ARG CA 5.89 6.83 5.20 5.62 3.83 </line>
<line>ARG CA 8.77 8.05 5.55 3.83 </line>
<line>ASP CA 7.80 5.50 3.81 </line>
<line>MET CA 5.49 3.79 </line>
<line>ASP CA 3.83 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>TYR CA 446</line>
<line>TYR CA 431</line>
<line>CYS CA 488</line>
<line>THR CA 433</line>
<line>ARG CA 393</line>
<line>ARG CA 328</line>
<line>ASP CA 234</line>
<line>MET CA 270</line>
<line>ASP CA 212</line>
<line>TYR CA 286</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1A4J</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1A4JH</entryIDChain>
<sequence>YFCVQAERLRRTFDY</sequence>
<secondary-structure>EEEEEE </secondary-structure>
<atom-coordinate>
<line>ATOM 2399 CA TYR H 94 14.607 5.039 -10.658 1.00 14.28 C </line>
<line>ATOM 2411 CA PHE H 95 17.045 3.420 -13.074 1.00 25.73 C </line>
<line>ATOM 2422 CA CYS H 96 17.133 4.061 -16.775 1.00 26.46 C </line>
<line>ATOM 2428 CA VAL H 97 18.517 0.817 -18.311 1.00 25.29 C </line>
<line>ATOM 2435 CA GLN H 98 19.641 0.117 -21.888 1.00 29.80 C </line>
<line>ATOM 2444 CA ALA H 99 18.715 -3.360 -23.128 1.00 29.36 C </line>
<line>ATOM 2449 CA GLU H 100 19.822 -5.454 -26.101 1.00 35.47 C </line>
<line>ATOM 2458 CA ARG H 101 17.310 -7.505 -28.148 1.00 41.92 C </line>
<line>ATOM 2469 CA LEU H 102 19.342 -10.618 -28.956 1.00 46.06 C </line>
<line>ATOM 2477 CA ARG H 103 20.683 -11.260 -25.466 1.00 44.34 C </line>
<line>ATOM 2488 CA ARG H 104 17.554 -9.732 -23.959 1.00 41.97 C </line>
<line>ATOM 2499 CA THR H 105 19.670 -8.353 -21.117 1.00 29.65 C </line>
<line>ATOM 2506 CA PHE H 106 19.844 -5.146 -19.114 1.00 28.47 C </line>
<line>ATOM 2517 CA ASP H 107 23.365 -4.221 -20.318 1.00 33.51 C </line>
<line>ATOM 2525 CA TYR H 108 23.976 -0.675 -19.079 1.00 37.04 C </line>
</atom-coordinate>
<distance-map>
<line> TYR ASP PHE THR ARG ARG LEU ARG GLU ALA GLN VAL CYS PHE TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 13.83 15.99 14.24 17.73 20.09 22.84 24.54 21.69 19.39 15.59 13.25 9.58 6.69 3.80 </line>
<line>PHE CA 10.04 12.28 10.85 14.50 17.08 19.55 21.32 18.62 16.01 12.24 9.76 6.03 3.76 </line>
<line>CYS CA 8.64 10.95 9.88 13.39 15.56 17.97 19.20 16.22 13.59 9.90 6.93 3.85 </line>
<line>VAL CA 5.71 7.27 6.16 9.66 12.00 14.20 15.64 12.94 10.09 6.38 3.81 </line>
<line>GLN CA 5.23 5.93 5.95 8.51 10.28 11.97 12.86 10.13 6.99 3.81 </line>
<line>ALA CA 7.16 5.50 4.54 5.47 6.53 8.47 9.33 6.66 3.80 </line>
<line>GLU CA 9.46 6.89 6.99 5.77 5.29 5.90 5.92 3.83 </line>
<line>ARG CA 13.17 10.43 9.67 7.46 4.75 5.72 3.80 </line>
<line>LEU CA 14.76 11.48 11.27 8.17 5.38 3.79 </line>
<line>ARG CA 12.79 9.12 8.86 5.33 3.79 </line>
<line>ARG CA 12.13 8.80 7.05 3.80 </line>
<line>THR CA 9.04 5.60 3.79 </line>
<line>PHE CA 6.09 3.83 </line>
<line>ASP CA 3.81 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>TYR CA 451</line>
<line>PHE CA 441</line>
<line>CYS CA 500</line>
<line>VAL CA 454</line>
<line>GLN CA 427</line>
<line>ALA CA 356</line>
<line>GLU CA 266</line>
<line>ARG CA 218</line>
<line>LEU CA 129</line>
<line>ARG CA 135</line>
<line>ARG CA 183</line>
<line>THR CA 221</line>
<line>PHE CA 297</line>
<line>ASP CA 265</line>
<line>TYR CA 309</line>
</n14>
</entryChain>
<parallel>
<x>-11.25</x>
<y>-16.631000518798828</y>
<z>64.4020004272461</z>
</parallel>
<rotation>
<x>0.4909999966621399</x>
<y>0.546999990940094</y>
<z>0.6779999732971191</z>
<x>-0.8569999933242798</x>
<y>0.16300000250339508</y>
<z>0.49000000953674316</z>
<x>0.15700000524520874</x>
<y>-0.8209999799728394</y>
<z>0.5479999780654907</z>
</rotation>
<rmsd>2.048105001449585</rmsd>
<dmax>4.632637023925781</dmax>
</indel>