NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1F3XB-3H6OB
confEVID 1F3XB-3H6OB
pdbIDA 1F3X
pdbIDB 3H6O
pdbChainA B
pdbChainB B
identity 0.926599979400635
indelSize 1
alignment <alignment>
<seq1>IQTQQLHAAMADTFLEHMCRLDIDSAPITARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELARASPHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPVQEAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq1>
<seq2>-QTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLI-----AEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq2>
<ss_1> GGG HHHHHH EEEE HHHH HHHHHHHHH EEEEE HHHHHHHHHHHHHHHH EEEEE EE EEEE EEE GGHHHH EEEEEE EEEEEEEEEEEEEEEE EEE EEE HHHHHHHHHHHH EEEE HHHHHHHHHHH EEEE HHHHH HHHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH EE GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHHH EEEE HHHHHHHH EEEEEEEHHHHHGGGG EEE HHHHHHHHHHHHHHHHHH EEEEEEE EEEEE </ss_1>
<ss_2>- GGG HHHHHH EEEE HHHHHHHHH EEEEE HHHHHHHHHHHHHHHGGG EEEEE ----- EEE EEEEEE GGG EEE HHHH EEEEEE EEEEEEE EEEEEEEEEEEEE EEE HHHHHHHHHHHH EEEE HHHHHHHHHHH EEEE HHHHH HHHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH EE GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHH EEE HHHHHHGGG EEEEE HHHHHGGGG EEE HHHHHHHHHHHHHHHHHH EEEEEEE EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3H6O</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>3H6OB</entryIDChain>
<sequence>RTGLI-----AEVEL</sequence>
<secondary-structure> ----- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 4485 CA ARG B 120 17.309 12.384 -26.164 1.00 42.03 C </line>
<line>ATOM 4496 CA THR B 121 15.141 11.677 -29.165 1.00 39.70 C </line>
<line>ATOM 4503 CA GLY B 122 15.363 13.719 -32.353 1.00 43.26 C </line>
<line>ATOM 4507 CA LEU B 123 13.049 16.116 -34.189 1.00 43.79 C </line>
<line>ATOM 4512 CA ILE B 124 9.480 15.242 -35.197 1.00 42.84 C </line>
<line>ATOM 4517 CA ALA B 130 5.471 19.508 -33.968 1.00 52.22 C </line>
<line>ATOM 4522 CA GLU B 131 3.889 16.415 -32.339 1.00 49.78 C </line>
<line>ATOM 4531 CA VAL B 132 2.878 12.879 -33.397 1.00 47.58 C </line>
<line>ATOM 4536 CA GLU B 133 0.065 10.873 -31.813 1.00 46.96 C </line>
<line>ATOM 4545 CA LEU B 134 1.063 7.326 -30.782 1.00 45.99 C </line>
</atom-coordinate>
<distance-map>
<line> LEU GLU VAL GLU ALA ILE LEU GLY THR ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 17.63 18.21 16.15 15.31 15.87 12.29 9.82 6.62 3.77 </line>
<line>THR CA 14.82 15.33 13.03 12.61 13.34 9.01 7.02 3.79 </line>
<line>GLY CA 15.74 15.57 12.56 11.79 11.57 6.71 3.80 </line>
<line>LEU CA 15.25 14.20 10.70 9.35 8.31 3.81 </line>
<line>ILE CA 12.37 10.92 7.24 6.39 5.98 </line>
<line>ALA CA 13.34 10.41 7.14 3.84 </line>
<line>GLU CA 9.64 6.75 3.83 </line>
<line>VAL CA 6.40 3.80 </line>
<line>GLU CA 3.83 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>ARG CA 365</line>
<line>THR CA 376</line>
<line>GLY CA 292</line>
<line>LEU CA 239</line>
<line>ILE CA 238</line>
<line>ALA CA 136</line>
<line>GLU CA 186</line>
<line>VAL CA 223</line>
<line>GLU CA 216</line>
<line>LEU CA 256</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1F3X</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1F3XB</entryIDChain>
<sequence>RTGLIKGSGTAEVEL</sequence>
<secondary-structure> EE </secondary-structure>
<atom-coordinate>
<line>ATOM 4797 CA ARG B 119 3.918 -46.403 -19.337 1.00 34.35 C </line>
<line>ATOM 4808 CA THR B 120 6.118 -47.996 -21.978 1.00 38.64 C </line>
<line>ATOM 4815 CA GLY B 121 7.265 -51.604 -21.985 1.00 45.50 C </line>
<line>ATOM 4819 CA LEU B 122 10.541 -53.364 -21.163 1.00 47.22 C </line>
<line>ATOM 4827 CA ILE B 123 13.433 -52.934 -23.586 1.00 51.93 C </line>
<line>ATOM 4835 CA LYS B 124 14.295 -56.186 -25.349 1.00 59.54 C </line>
<line>ATOM 4844 CA GLY B 125 16.772 -58.556 -23.700 1.00 72.20 C </line>
<line>ATOM 4848 CA SER B 126 20.056 -57.393 -25.326 1.00 82.10 C </line>
<line>ATOM 4854 CA GLY B 127 23.073 -56.973 -23.055 1.00 84.56 C </line>
<line>ATOM 4858 CA THR B 128 21.256 -54.407 -20.882 1.00 84.91 C </line>
<line>ATOM 4865 CA ALA B 129 22.314 -51.887 -23.555 1.00 77.15 C </line>
<line>ATOM 4870 CA GLU B 130 19.534 -49.342 -23.166 1.00 67.59 C </line>
<line>ATOM 4879 CA VAL B 131 18.125 -48.091 -26.459 1.00 62.25 C </line>
<line>ATOM 4886 CA GLU B 132 19.212 -44.942 -28.297 1.00 60.26 C </line>
<line>ATOM 4895 CA LEU B 133 16.699 -42.815 -30.199 1.00 57.89 C </line>
</atom-coordinate>
<distance-map>
<line> LEU GLU VAL GLU ALA THR GLY SER GLY LYS ILE LEU GLY THR ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 17.15 17.79 15.98 16.34 19.65 19.16 22.19 20.42 18.22 15.48 12.30 9.78 6.73 3.79 </line>
<line>THR CA 14.37 14.86 12.82 13.54 16.73 16.48 19.22 17.14 15.10 12.05 8.97 7.00 3.79 </line>
<line>GLY CA 15.29 15.07 12.26 12.53 15.13 14.31 16.73 14.43 11.90 9.04 6.51 3.81 </line>
<line>LEU CA 15.19 14.04 10.65 10.05 12.10 10.77 13.18 11.14 8.50 6.29 3.80 </line>
<line>ILE CA 12.52 10.93 7.33 7.09 8.94 8.41 10.47 8.17 6.54 3.80 </line>
<line>LYS CA 14.43 12.62 9.02 8.89 9.27 8.46 9.11 5.89 3.80 </line>
<line>GLY CA 17.03 14.57 10.91 9.63 8.67 6.73 6.53 3.84 </line>
<line>SER CA 15.73 12.83 9.57 8.35 6.21 5.49 3.80 </line>
<line>GLY CA 17.09 13.68 10.72 8.41 5.17 3.82 </line>
<line>THR CA 15.55 12.20 8.99 5.82 3.82 </line>
<line>ALA CA 12.57 8.96 6.36 3.79 </line>
<line>GLU CA 10.01 6.77 3.79 </line>
<line>VAL CA 6.62 3.80 </line>
<line>GLU CA 3.80 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>ARG CA 412</line>
<line>THR CA 431</line>
<line>GLY CA 351</line>
<line>LEU CA 310</line>
<line>ILE CA 307</line>
<line>LYS CA 242</line>
<line>GLY CA 159</line>
<line>SER CA 143</line>
<line>GLY CA 102</line>
<line>THR CA 140</line>
<line>ALA CA 157</line>
<line>GLU CA 223</line>
<line>VAL CA 287</line>
<line>GLU CA 278</line>
<line>LEU CA 306</line>
</n14>
</entryChain>
<parallel>
<x>-2.3329999446868896</x>
<y>64.94499969482422</y>
<z>-9.442999839782715</z>
</parallel>
<rotation>
<x>-0.8709999918937683</x>
<y>0.4749999940395355</y>
<z>-0.12399999797344208</z>
<x>-0.33899998664855957</x>
<y>-0.4009999930858612</y>
<z>0.8510000109672546</z>
<x>0.3540000021457672</x>
<y>0.7829999923706055</y>
<z>0.5109999775886536</z>
</rotation>
<rmsd>1.4594190120697021</rmsd>
<dmax>3.5345990657806396</dmax>
</indel>