NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1F3XH-3G2GD
confEVID 1F3XH-3G2GD
pdbIDA 1F3X
pdbIDB 3G2G
pdbChainA H
pdbChainB D
identity 0.91509997844696
indelSize 1
alignment <alignment>
<seq1>IQTQQLHAAMADTFLEHMCRLDIDSAPITARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELARASPHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPVQEAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq1>
<seq2>-QTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLI------EVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQV-----DFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRYAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq2>
<ss_1> GGG HHHHHH EEEE HHHHHHHHH EEEEE HHHHHHHHHHHHHHHHHHH EEEEE EEE GGG EE EE GGHHHH EEEEEE EEEEEEEEE EEEE EEE HHHHHHHHHHHH EEE HHHHHHHHHHH EEEE HHHHH HHHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH EE GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH HHHHHHHHH HHHHHHHHHHHHHHH EEEE HHHHHHHH EEEEEEEHHHHHGGGG HHHHHHHHHHHHHHHHHH EEEEEEE EEEEE </ss_1>
<ss_2>- HHHH HHHHHH EEEE HHHHHHHHH EEEEE HHHHHHHHHHHHHHHGGG EEEEE ------ EEE EEEEEE GGG EEE EEEEEE EEEEE----- EEEEEEEEEEE EEE HHHHHHHHHHHH EEEE HHHHHHHHHHH EEEE HHHHH HHHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH EE GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHHHH EEE HHHHHHGGG EEEEE HHHHHGGGG EEE HHHHHHHHHHHHHHHHHH EEEEEEEEEE EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3G2G</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>3G2GD</entryIDChain>
<sequence>ISLQV-----DFLVT</sequence>
<secondary-structure>EEEEE----- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 12056 CA ILE D 181 -43.734 16.846 40.002 1.00 47.65 C </line>
<line>ATOM 12064 CA SER D 182 -44.281 17.356 36.271 1.00 52.03 C </line>
<line>ATOM 12070 CA LEU D 183 -46.886 19.374 34.375 1.00 58.45 C </line>
<line>ATOM 12078 CA GLN D 184 -47.928 19.697 30.740 1.00 63.30 C </line>
<line>ATOM 12083 CA VAL D 185 -49.177 22.899 29.105 1.00 65.11 C </line>
<line>ATOM 12088 CA ASP D 191 -51.224 35.843 30.700 1.00 71.97 C </line>
<line>ATOM 12093 CA PHE D 192 -51.955 32.597 32.536 1.00 74.58 C </line>
<line>ATOM 12104 CA LEU D 193 -51.460 28.863 32.022 1.00 69.97 C </line>
<line>ATOM 12112 CA VAL D 194 -53.827 25.931 32.401 1.00 66.11 C </line>
<line>ATOM 12119 CA THR D 195 -52.048 22.595 32.792 1.00 67.29 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL LEU PHE ASP VAL GLN LEU SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.42 15.56 16.36 19.27 22.44 13.60 10.56 6.93 3.81 </line>
<line>SER CA 9.99 13.40 14.21 17.47 20.52 10.30 7.03 3.80 </line>
<line>LEU CA 6.29 9.75 10.79 14.28 17.42 6.74 3.80 </line>
<line>GLN CA 5.44 8.74 9.91 13.63 16.48 3.81 </line>
<line>VAL CA 4.68 6.46 7.02 10.66 13.20 </line>
<line>ASP CA 13.44 10.39 7.11 3.80 </line>
<line>PHE CA 10.01 6.93 3.80 </line>
<line>LEU CA 6.34 3.79 </line>
<line>VAL CA 3.80 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 311</line>
<line>SER CA 321</line>
<line>LEU CA 335</line>
<line>GLN CA 260</line>
<line>VAL CA 255</line>
<line>ASP CA 178</line>
<line>PHE CA 239</line>
<line>LEU CA 272</line>
<line>VAL CA 238</line>
<line>THR CA 278</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1F3X</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1F3XH</entryIDChain>
<sequence>ISLQVKQKGPDFLVT</sequence>
<secondary-structure>EEEEEEEEE EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 29113 CA ILE H 180 75.620 49.617 68.670 1.00 61.42 C </line>
<line>ATOM 29121 CA SER H 181 76.038 48.574 65.022 1.00 64.28 C </line>
<line>ATOM 29127 CA LEU H 182 79.270 48.679 62.989 1.00 67.21 C </line>
<line>ATOM 29135 CA GLN H 183 79.994 47.726 59.380 1.00 73.94 C </line>
<line>ATOM 29144 CA VAL H 184 83.318 46.470 58.015 1.00 77.65 C </line>
<line>ATOM 29151 CA LYS H 185 84.287 48.871 55.232 1.00 85.32 C </line>
<line>ATOM 29160 CA GLN H 186 87.948 47.869 54.903 1.00 92.24 C </line>
<line>ATOM 29169 CA LYS H 187 89.388 44.556 56.088 1.00 94.63 C </line>
<line>ATOM 29178 CA GLY H 188 93.053 45.423 56.556 1.00 97.70 C </line>
<line>ATOM 29182 CA PRO H 189 95.545 42.822 57.880 1.00 98.30 C </line>
<line>ATOM 29189 CA ASP H 190 95.244 42.584 61.697 1.00 97.16 C </line>
<line>ATOM 29197 CA PHE H 191 92.611 45.381 61.896 1.00 94.12 C </line>
<line>ATOM 29208 CA LEU H 192 89.198 46.591 60.667 1.00 90.93 C </line>
<line>ATOM 29216 CA VAL H 193 88.143 50.053 59.501 1.00 87.81 C </line>
<line>ATOM 29223 CA THR H 194 84.406 50.284 60.079 1.00 84.84 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL LEU PHE ASP PRO GLY LYS GLN LYS VAL GLN LEU SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.31 15.53 16.05 18.78 21.98 23.66 21.64 19.33 18.56 16.01 13.52 10.44 6.82 3.82 </line>
<line>SER CA 9.87 13.39 14.00 17.16 20.39 21.55 19.26 16.56 15.64 12.81 10.32 6.94 3.82 </line>
<line>LEU CA 6.12 9.63 10.41 13.79 17.15 18.04 15.55 12.92 11.89 9.24 6.78 3.80 </line>
<line>GLN CA 5.15 8.48 9.36 13.08 16.26 16.37 13.56 10.45 9.13 6.08 3.81 </line>
<line>VAL CA 4.47 6.19 6.45 10.13 13.07 12.76 9.90 6.65 5.75 3.80 </line>
<line>LYS CA 5.05 5.87 7.67 11.22 14.19 13.05 9.51 6.74 3.81 </line>
<line>GLN CA 6.72 5.09 6.03 8.77 11.28 9.59 5.90 3.80 </line>
<line>LYS CA 8.58 6.59 5.01 6.69 8.35 6.64 3.80 </line>
<line>GLY CA 10.53 7.36 5.76 5.36 6.27 3.84 </line>
<line>PRO CA 13.59 10.47 7.89 5.59 3.84 </line>
<line>ASP CA 13.39 10.54 7.33 3.85 </line>
<line>PHE CA 9.73 6.89 3.82 </line>
<line>LEU CA 6.08 3.80 </line>
<line>VAL CA 3.79 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 351</line>
<line>SER CA 368</line>
<line>LEU CA 409</line>
<line>GLN CA 340</line>
<line>VAL CA 341</line>
<line>LYS CA 241</line>
<line>GLN CA 238</line>
<line>LYS CA 253</line>
<line>GLY CA 216</line>
<line>PRO CA 192</line>
<line>ASP CA 259</line>
<line>PHE CA 331</line>
<line>LEU CA 364</line>
<line>VAL CA 324</line>
<line>THR CA 363</line>
</n14>
</entryChain>
<parallel>
<x>-132.24200439453125</x>
<y>-22.76799964904785</y>
<z>-29.072999954223633</z>
</parallel>
<rotation>
<x>-0.5230000019073486</x>
<y>0.8519999980926514</y>
<z>0.02199999988079071</z>
<x>-0.765999972820282</x>
<y>-0.48100000619888306</y>
<z>0.4259999990463257</z>
<x>0.37400001287460327</x>
<y>0.20600000023841858</y>
<z>0.9039999842643738</z>
</rotation>
<rmsd>0.3065969944000244</rmsd>
<dmax>0.45580199360847473</dmax>
</indel>