NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1FH5H-1F8TH
confEVID 1FH5H-1F8TH
pdbIDA 1FH5
pdbIDB 1F8T
pdbChainA H
pdbChainB H
identity 0.62389999628067
indelSize 2
alignment <alignment>
<seq1>-SGGGLV-----KPAGSLKLSCAASGFTFS-SYYMYWVRQTPDKRLEWVATISDGGSYTYYPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYCARD----AMDYWGQGTLVTVSAAKTTPPSVYPLA----------VTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSETVTCNVAHPASSTKVDKKIVPR--</seq1>
<seq2>GVQLQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYITYSG-STGYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCASYDDYTWFTYWGQGTLVTVSAAKTTPPSVFPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDC</seq2>
<ss_1>- EEE----- EEEEE - EEEEEEEE EEE EEE EEE EEEEEEE EEEEEEE GGG EEEEEEEE---- EEEE EEE ---------- EEEEE EEEEE EEE EEEEEEEE HHHH EEEEEEE EEEEEEE --</ss_1>
<ss_2> EEEEE EEEEEEEE HHHHEEEEEEEEE EEEEEEEEE -EEEEEHHHH EEEEEEE EEEEEEE GGG EEEEEEEE EEE EEEE EEEEE EEEEEEEEEEEEE EEEEE EEE EEEEEEEEEE EEEEEEE EEEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1FH5</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1FH5H</entryIDChain>
<sequence>YCARD----AMDYW</sequence>
<secondary-structure>EEEEE---- </secondary-structure>
<atom-coordinate>
<line>ATOM 2341 CA TYR H 92 -1.951 -6.732 33.383 1.00 22.93 C </line>
<line>ATOM 2353 CA CYS H 93 -1.976 -6.827 37.151 1.00 31.92 C </line>
<line>ATOM 2359 CA ALA H 94 -3.694 -4.368 39.439 1.00 30.16 C </line>
<line>ATOM 2364 CA ARG H 95 -4.323 -3.704 43.109 1.00 53.04 C </line>
<line>ATOM 2375 CA ASP H 96 -7.784 -3.572 44.530 1.00 70.73 C </line>
<line>ATOM 2383 CA ALA H 106 -12.539 -1.522 41.380 1.00 68.96 C </line>
<line>ATOM 2388 CA MET H 107 -9.153 -2.562 40.055 1.00 58.10 C </line>
<line>ATOM 2396 CA ASP H 108 -6.430 0.026 40.207 1.00 57.84 C </line>
<line>ATOM 2404 CA TYR H 109 -3.754 -0.852 37.677 1.00 69.05 C </line>
<line>ATOM 2416 CA TRP H 110 -0.103 -0.015 37.630 1.00 78.08 C </line>
</atom-coordinate>
<distance-map>
<line> TRP TYR ASP MET ALA ASP ARG ALA CYS TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 8.16 7.50 10.60 10.67 14.25 12.97 10.46 6.73 3.77 </line>
<line>CYS CA 7.08 6.26 8.73 8.84 12.55 9.94 7.12 3.77 </line>
<line>ALA CA 5.93 3.93 5.23 5.78 9.49 6.58 3.78 </line>
<line>ARG CA 7.84 6.16 5.17 5.83 8.67 3.74 </line>
<line>ASP CA 10.92 8.40 5.79 4.79 6.06 </line>
<line>ALA CA 13.08 9.56 6.41 3.78 </line>
<line>MET CA 9.71 6.14 3.76 </line>
<line>ASP CA 6.83 3.79 </line>
<line>TYR CA 3.75 </line>
<line>TRP CA </line>
</distance-map>
<n14>
<line>TYR CA 414</line>
<line>CYS CA 455</line>
<line>ALA CA 395</line>
<line>ARG CA 345</line>
<line>ASP CA 287</line>
<line>ALA CA 171</line>
<line>MET CA 254</line>
<line>ASP CA 246</line>
<line>TYR CA 290</line>
<line>TRP CA 269</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1F8T</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1F8TH</entryIDChain>
<sequence>YCASYDDYTWFTYW</sequence>
<secondary-structure>EEEEE EEE </secondary-structure>
<atom-coordinate>
<line>ATOM 2442 CA TYR H 91 35.896 -66.234 42.392 1.00 15.62 C </line>
<line>ATOM 2454 CA CYS H 92 35.315 -62.515 42.110 1.00 16.04 C </line>
<line>ATOM 2460 CA ALA H 93 33.161 -60.937 44.805 1.00 16.44 C </line>
<line>ATOM 2465 CA SER H 94 31.983 -57.548 45.985 1.00 20.05 C </line>
<line>ATOM 2471 CA TYR H 95 31.062 -56.513 49.535 1.00 23.70 C </line>
<line>ATOM 2483 CA ASP H 96 32.110 -54.046 52.256 1.00 29.67 C </line>
<line>ATOM 2491 CA ASP H 97 31.679 -55.846 55.609 1.00 26.80 C </line>
<line>ATOM 2499 CA TYR H 98 29.253 -53.327 57.094 1.00 30.91 C </line>
<line>ATOM 2511 CA THR H 99 26.407 -53.153 54.566 1.00 29.24 C </line>
<line>ATOM 2518 CA TRP H 100 23.873 -55.625 53.108 1.00 29.03 C </line>
<line>ATOM 2532 CA PHE H 100A 25.539 -55.473 49.686 1.00 23.67 C </line>
<line>ATOM 2543 CA THR H 101 27.235 -58.793 48.935 1.00 19.20 C </line>
<line>ATOM 2550 CA TYR H 102 27.552 -60.654 45.641 1.00 19.40 C </line>
<line>ATOM 2562 CA TRP H 103 29.749 -63.535 44.518 1.00 19.26 C </line>
</atom-coordinate>
<distance-map>
<line> TRP TYR THR PHE TRP THR TYR ASP ASP TYR SER ALA CYS TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 7.04 10.55 13.16 16.62 19.29 20.23 20.66 17.33 16.13 13.00 10.18 6.43 3.77 </line>
<line>CYS CA 6.15 8.73 11.21 14.23 17.30 17.95 18.59 15.49 13.60 10.45 7.13 3.79 </line>
<line>ALA CA 4.30 5.68 7.53 10.57 13.54 14.19 14.97 12.03 10.20 6.81 3.78 </line>
<line>SER CA 6.56 5.42 5.73 7.72 10.96 11.14 12.19 9.78 7.18 3.81 </line>
<line>TYR CA 8.73 6.68 4.49 5.62 8.08 7.63 8.40 6.14 3.82 </line>
<line>ASP CA 12.47 10.40 7.57 7.20 8.43 6.22 5.66 3.83 </line>
<line>ASP CA 13.63 11.81 8.54 8.54 8.20 6.01 3.80 </line>
<line>TYR CA 16.21 13.70 10.03 8.56 7.08 3.81 </line>
<line>THR CA 14.83 11.71 8.01 5.47 3.83 </line>
<line>TRP CA 13.07 9.73 6.23 3.81 </line>
<line>PHE CA 10.46 6.87 3.80 </line>
<line>THR CA 6.95 3.80 </line>
<line>TYR CA 3.79 </line>
<line>TRP CA </line>
</distance-map>
<n14>
<line>TYR CA 432</line>
<line>CYS CA 491</line>
<line>ALA CA 469</line>
<line>SER CA 441</line>
<line>TYR CA 332</line>
<line>ASP CA 271</line>
<line>ASP CA 191</line>
<line>TYR CA 128</line>
<line>THR CA 155</line>
<line>TRP CA 157</line>
<line>PHE CA 234</line>
<line>THR CA 271</line>
<line>TYR CA 326</line>
<line>TRP CA 350</line>
</n14>
</entryChain>
<parallel>
<x>-36.888999938964844</x>
<y>55.94499969482422</y>
<z>-6.840000152587891</z>
</parallel>
<rotation>
<x>0.5230000019073486</x>
<y>-0.8309999704360962</y>
<z>0.18700000643730164</z>
<x>0.02500000037252903</x>
<y>0.23399999737739563</y>
<z>0.972000002861023</z>
<x>-0.8519999980926514</x>
<y>-0.5040000081062317</y>
<z>0.14300000667572021</z>
</rotation>
<rmsd>2.1505279541015625</rmsd>
<dmax>3.521714925765991</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1F8T</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1F8TH</entryIDChain>
<sequence>ITYSG-STGYN</sequence>
<secondary-structure>EE -EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 2104 CA ILE H 51 40.678 -52.972 43.913 1.00 17.46 C </line>
<line>ATOM 2112 CA THR H 52 38.337 -50.434 45.528 1.00 19.20 C </line>
<line>ATOM 2119 CA TYR H 53 35.806 -48.233 43.748 1.00 21.81 C </line>
<line>ATOM 2131 CA SER H 54 38.445 -45.483 43.890 1.00 22.49 C </line>
<line>ATOM 2137 CA GLY H 55 41.048 -47.620 42.131 1.00 21.88 C </line>
<line>ATOM 2141 CA SER H 56 43.323 -48.345 45.090 1.00 21.65 C </line>
<line>ATOM 2147 CA THR H 57 44.541 -51.920 45.447 1.00 21.28 C </line>
<line>ATOM 2154 CA GLY H 58 45.347 -54.293 48.277 1.00 20.57 C </line>
<line>ATOM 2158 CA TYR H 59 47.090 -57.652 47.942 1.00 18.05 C </line>
<line>ATOM 2170 CA ASN H 60 47.568 -60.634 50.239 1.00 20.05 C </line>
</atom-coordinate>
<distance-map>
<line> ASN TYR GLY THR SER GLY SER TYR THR ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.09 8.90 6.53 4.29 5.46 5.65 7.81 6.80 3.81 </line>
<line>THR CA 14.54 11.60 8.46 6.38 5.42 5.18 5.22 3.80 </line>
<line>TYR CA 18.28 15.29 12.18 9.63 7.64 5.52 3.81 </line>
<line>SER CA 18.79 15.47 12.02 9.00 5.78 3.80 </line>
<line>GLY CA 16.66 13.07 10.04 6.46 3.80 </line>
<line>SER CA 13.98 10.44 7.05 3.79 </line>
<line>THR CA 10.40 6.75 3.78 </line>
<line>GLY CA 7.00 3.80 </line>
<line>TYR CA 3.79 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>ILE CA 383</line>
<line>THR CA 348</line>
<line>TYR CA 306</line>
<line>SER CA 223</line>
<line>GLY CA 252</line>
<line>SER CA 222</line>
<line>THR CA 287</line>
<line>GLY CA 285</line>
<line>TYR CA 283</line>
<line>ASN CA 245</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1FH5</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1FH5H</entryIDChain>
<sequence>ISDGGSYTYYP</sequence>
<secondary-structure>E EEE </secondary-structure>
<atom-coordinate>
<line>ATOM 1992 CA ILE H 48 -5.806 -13.308 44.936 1.00 29.00 C </line>
<line>ATOM 2000 CA SER H 49 -6.579 -12.359 48.553 1.00 39.53 C </line>
<line>ATOM 2006 CA ASP H 50 -4.320 -10.053 50.583 1.00 48.35 C </line>
<line>ATOM 2014 CA GLY H 51 -2.622 -12.958 52.298 1.00 40.48 C </line>
<line>ATOM 2018 CA GLY H 52 -3.087 -15.487 49.515 1.00 39.83 C </line>
<line>ATOM 2022 CA SER H 53 -5.601 -17.771 51.119 1.00 44.01 C </line>
<line>ATOM 2028 CA TYR H 54 -8.412 -17.266 48.647 1.00 39.66 C </line>
<line>ATOM 2040 CA THR H 55 -8.253 -17.536 44.896 1.00 30.65 C </line>
<line>ATOM 2047 CA TYR H 56 -10.855 -16.817 42.271 1.00 28.82 C </line>
<line>ATOM 2059 CA TYR H 57 -11.028 -17.543 38.558 1.00 34.18 C </line>
<line>ATOM 2071 CA PRO H 58 -13.639 -17.587 35.736 1.00 25.88 C </line>
</atom-coordinate>
<distance-map>
<line> PRO TYR TYR THR TYR SER GLY GLY ASP SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.82 9.27 6.70 4.89 6.02 7.63 5.75 8.03 6.69 3.82 </line>
<line>SER CA 15.54 12.11 8.81 6.56 5.24 6.07 4.79 5.48 3.81 </line>
<line>ASP CA 19.08 15.67 12.55 10.19 8.52 7.84 5.67 3.78 </line>
<line>GLY CA 20.42 16.75 13.54 10.37 8.09 5.78 3.79 </line>
<line>GLY CA 17.48 13.69 10.70 7.23 5.68 3.76 </line>
<line>SER CA 17.36 13.69 10.33 6.77 3.78 </line>
<line>TYR CA 13.93 10.43 6.84 3.76 </line>
<line>THR CA 10.63 6.92 3.77 </line>
<line>TYR CA 7.14 3.79 </line>
<line>TYR CA 3.84 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>ILE CA 377</line>
<line>SER CA 290</line>
<line>ASP CA 284</line>
<line>GLY CA 240</line>
<line>GLY CA 273</line>
<line>SER CA 184</line>
<line>TYR CA 209</line>
<line>THR CA 281</line>
<line>TYR CA 287</line>
<line>TYR CA 300</line>
<line>PRO CA 242</line>
</n14>
</entryChain>
<parallel>
<x>47.18199920654297</x>
<y>-35.43899917602539</y>
<z>-2.9590001106262207</z>
</parallel>
<rotation>
<x>-0.21199999749660492</x>
<y>0.13899999856948853</y>
<z>-0.9670000076293945</z>
<x>-0.9419999718666077</x>
<y>-0.2919999957084656</y>
<z>0.16500000655651093</z>
<x>-0.2590000033378601</x>
<y>0.9459999799728394</y>
<z>0.19300000369548798</z>
</rotation>
<rmsd>0.9780529737472534</rmsd>
<dmax>1.745885968208313</dmax>
</indel>