NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1FKVA-1IOTA
confEVID 1FKVA-1IOTA
pdbIDA 1FKV
pdbIDB 1IOT
pdbChainA A
pdbChainB A
identity 0.356599986553192
indelSize 1
alignment <alignment>
<seq1>MEQLTKCEVFQKL--KDLKDYGGVSLPEWVCIAFHTSGYDTQAIVQNN-DSTEYGLFQINNKIWCKDDQNPHSRNICNISCDKFLDDDLTDDIVCAKKILD-KVGI----NYWLAHKALCSE-KLDQWLC----</seq1>
<seq2>-KVFGRCELAAALKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRN----RCKGTDVQAWIRGCRL</seq2>
<ss_1> HHHHHHH --GGG GGG HHHHHHHHHH EEE - EEEEE EE GGGGG HHHHHHHHHHHH- ----HHHH - GGGG ----</ss_1>
<ss_2>- HHHHHHHHHH GGG HHHHHHHHHH EEEEE EEEEE EE GGGG HHHHHHHHHHH GGGG HHHHH---- GGGGG </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1FKV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1FKVA</entryIDChain>
<sequence>IVQNN-DSTEY</sequence>
<secondary-structure>EE - EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 329 CA ILE A 41 11.216 3.874 6.549 1.00 10.88 C </line>
<line>ATOM 337 CA VAL A 42 11.184 2.013 9.818 1.00 11.43 C </line>
<line>ATOM 344 CA GLN A 43 7.978 1.376 11.715 1.00 13.40 C </line>
<line>ATOM 353 CA ASN A 44 7.345 0.810 15.401 1.00 19.37 C </line>
<line>ATOM 361 CA ASN A 45 3.965 0.392 17.063 1.00 26.08 C </line>
<line>ATOM 369 CA ASP A 46 3.484 4.077 17.920 1.00 31.76 C </line>
<line>ATOM 377 CA SER A 47 5.798 5.779 15.426 1.00 20.67 C </line>
<line>ATOM 383 CA THR A 48 7.603 5.842 12.092 1.00 12.87 C </line>
<line>ATOM 390 CA GLU A 49 11.184 6.940 11.281 1.00 9.21 C </line>
<line>ATOM 399 CA TYR A 50 12.124 8.527 7.958 1.00 7.36 C </line>
</atom-coordinate>
<distance-map>
<line> TYR GLU THR SER ASP ASN ASN GLN VAL ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 4.95 5.64 6.90 10.57 13.75 13.24 10.14 6.59 3.76 </line>
<line>VAL CA 6.84 5.14 5.71 8.64 11.37 10.36 6.88 3.78 </line>
<line>GLN CA 9.08 6.44 4.50 6.16 8.12 6.76 3.78 </line>
<line>ASN CA 11.74 8.32 6.03 5.20 5.65 3.79 </line>
<line>ASN CA 14.68 11.33 8.22 5.92 3.81 </line>
<line>ASP CA 13.92 10.56 7.35 3.80 </line>
<line>SER CA 10.17 6.89 3.79 </line>
<line>THR CA 6.69 3.83 </line>
<line>GLU CA 3.80 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>ILE CA 305</line>
<line>VAL CA 267</line>
<line>GLN CA 205</line>
<line>ASN CA 156</line>
<line>ASN CA 124</line>
<line>ASP CA 181</line>
<line>SER CA 253</line>
<line>THR CA 309</line>
<line>GLU CA 388</line>
<line>TYR CA 443</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1IOT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1IOTA</entryIDChain>
<sequence>TNRNTDGSTDY</sequence>
<secondary-structure>EEEE EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 333 CA THR A 43 10.567 16.020 17.757 1.00 17.61 C </line>
<line>ATOM 340 CA ASN A 44 12.666 18.958 18.875 1.00 21.79 C </line>
<line>ATOM 348 CA ARG A 45 14.957 19.103 21.865 1.00 22.74 C </line>
<line>ATOM 359 CA ASN A 46 15.072 22.180 24.046 1.00 28.17 C </line>
<line>ATOM 367 CA THR A 47 17.952 23.861 25.865 1.00 32.18 C </line>
<line>ATOM 374 CA ASP A 48 16.595 22.893 29.273 1.00 25.42 C </line>
<line>ATOM 382 CA GLY A 49 16.972 19.252 28.213 1.00 22.61 C </line>
<line>ATOM 386 CA SER A 50 13.278 18.612 27.661 1.00 19.22 C </line>
<line>ATOM 392 CA THR A 51 11.882 17.623 24.228 1.00 17.83 C </line>
<line>ATOM 399 CA ASP A 52 8.739 18.552 22.236 1.00 16.87 C </line>
<line>ATOM 407 CA TYR A 53 6.739 15.734 20.639 1.00 17.02 C </line>
</atom-coordinate>
<distance-map>
<line> TYR ASP THR SER GLY ASP THR ASN ARG ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 4.80 5.46 6.80 10.59 12.68 14.70 13.48 9.89 6.76 3.78 </line>
<line>ASN CA 6.97 5.18 5.57 8.81 10.29 11.79 10.04 6.55 3.77 </line>
<line>ARG CA 8.97 6.25 4.15 6.05 6.66 8.48 6.90 3.77 </line>
<line>ASN CA 11.07 7.52 5.57 5.39 5.44 5.49 3.80 </line>
<line>THR CA 14.80 11.24 8.86 7.25 5.26 3.79 </line>
<line>ASP CA 14.93 11.41 8.69 5.65 3.81 </line>
<line>GLY CA 13.21 10.20 6.67 3.79 </line>
<line>SER CA 10.02 7.07 3.84 </line>
<line>THR CA 6.55 3.84 </line>
<line>ASP CA 3.81 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>THR CA 296</line>
<line>ASN CA 274</line>
<line>ARG CA 224</line>
<line>ASN CA 206</line>
<line>THR CA 141</line>
<line>ASP CA 157</line>
<line>GLY CA 189</line>
<line>SER CA 258</line>
<line>THR CA 317</line>
<line>ASP CA 403</line>
<line>TYR CA 431</line>
</n14>
</entryChain>
<parallel>
<x>-6.8470001220703125</x>
<y>-16.430999755859375</y>
<z>-10.315999984741211</z>
</parallel>
<rotation>
<x>-0.8199999928474426</x>
<y>-0.5699999928474426</y>
<z>-0.04500000178813934</z>
<x>0.3840000033378601</x>
<y>-0.6079999804496765</y>
<z>0.6940000057220459</z>
<x>-0.4230000078678131</x>
<y>0.5519999861717224</y>
<z>0.7179999947547913</z>
</rotation>
<rmsd>1.0017509460449219</rmsd>
<dmax>1.6765249967575073</dmax>
</indel>