1GB5A-2G4NF | |
confEVID | 1GB5A-2G4NF |
pdbIDA | 1GB5 |
pdbIDB | 2G4N |
pdbChainA | A |
pdbChainB | F |
identity | 0.343800008296967 |
indelSize | 3 |
alignment | <alignment> <seq1>KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAGNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV</seq1> <seq2>EQLTKCEVFREL--KDLKGYGGVSLPEWVCTTFHTSGYDTQAIVQNN--DSTEYGLFQINNKIWCKDDQNPHSSNICNISCDKFLDDDLTDDIMCVKKILDK-VGINYWLAHKALCSE-KLDQWLCEK--</seq2> <ss_1> HHHHHHHHHH GGG HHHHHHHHHH EEEEE EEEEE EE GGGGG HHHHHHHHHHH GGGG HHHHH </ss_1> <ss_2> HHHHHHH --GGG GGG HHHHHHHHHH EEEEE -- EEEEE EE GGGG HHHHHHHHHHHH - GGG HHHH - GGGG --</ss_2> </alignment> |
indel | <indel> <confEVID></confEVID> <index>0</index> <entryChain> <pdbID>2G4N</pdbID> <pdbChain>F</pdbChain> <entryIDChain>2G4NF</entryIDChain> <sequence>IVQNN--DSTEY</sequence> <secondary-structure>EEEE -- EEEE</secondary-structure> <atom-coordinate> <line>ATOM 5205 CA ILE F 41 55.377 19.946 112.685 1.00 37.59 C </line> <line>ATOM 5213 CA VAL F 42 57.447 20.019 115.877 1.00 37.52 C </line> <line>ATOM 5220 CA GLN F 43 59.735 17.071 116.847 1.00 40.70 C </line> <line>ATOM 5229 CA ASN F 44 61.110 16.263 120.380 1.00 46.91 C </line> <line>ATOM 5237 CA ASN F 45 63.107 13.101 120.092 1.00 48.98 C </line> <line>ATOM 5245 CA ASP F 46 60.585 10.573 121.273 1.00 48.65 C </line> <line>ATOM 5253 CA SER F 47 57.509 12.362 119.810 1.00 43.83 C </line> <line>ATOM 5259 CA THR F 48 56.163 14.628 117.058 1.00 40.01 C </line> <line>ATOM 5266 CA GLU F 49 53.262 17.054 117.116 1.00 39.86 C </line> <line>ATOM 5275 CA TYR F 50 51.080 17.791 114.131 1.00 37.25 C </line> </atom-coordinate> <distance-map> <line> TYR GLU THR SER ASP ASN ASN GLN VAL ILE </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>ILE CA 5.02 5.70 6.93 10.62 13.74 12.71 10.28 6.68 3.81 </line> <line>VAL CA 6.97 5.28 5.67 8.61 11.32 9.88 6.91 3.86 </line> <line>GLN CA 9.10 6.48 4.33 5.99 7.91 6.14 3.88 </line> <line>ASN CA 11.92 8.54 6.18 5.34 5.78 3.75 </line> <line>ASN CA 14.22 11.02 7.73 5.65 3.76 </line> <line>ASP CA 13.91 10.63 7.33 3.85 </line> <line>SER CA 10.15 6.88 3.81 </line> <line>THR CA 6.66 3.78 </line> <line>GLU CA 3.77 </line> <line>TYR CA </line> </distance-map> <n14> <line>ILE CA 296</line> <line>VAL CA 266</line> <line>GLN CA 210</line> <line>ASN CA 158</line> <line>ASN CA 136</line> <line>ASP CA 177</line> <line>SER CA 249</line> <line>THR CA 309</line> <line>GLU CA 406</line> <line>TYR CA 445</line> </n14> </entryChain> <entryChain> <pdbID>1GB5</pdbID> <pdbChain>A</pdbChain> <entryIDChain>1GB5A</entryIDChain> <sequence>TNYNAGDRSTDY</sequence> <secondary-structure>EEEE EEEE</secondary-structure> <atom-coordinate> <line>ATOM 343 CA THR A 43 3.272 8.430 25.436 1.00 11.63 C </line> <line>ATOM 350 CA ASN A 44 4.764 4.961 25.144 1.00 11.59 C </line> <line>ATOM 358 CA TYR A 45 3.400 2.153 27.308 1.00 9.06 C </line> <line>ATOM 370 CA ASN A 46 5.860 -0.669 27.952 1.00 9.92 C </line> <line>ATOM 378 CA ALA A 47 3.759 -3.838 28.273 1.00 8.48 C </line> <line>ATOM 383 CA GLY A 48 6.751 -5.894 29.355 1.00 8.21 C </line> <line>ATOM 387 CA ASP A 49 7.105 -3.980 32.623 1.00 6.47 C </line> <line>ATOM 395 CA ARG A 50 3.885 -1.914 33.031 1.00 7.77 C </line> <line>ATOM 406 CA SER A 51 5.633 1.488 32.900 1.00 7.03 C </line> <line>ATOM 412 CA THR A 52 4.872 4.426 30.574 1.00 4.60 C </line> <line>ATOM 419 CA ASP A 53 7.142 7.080 29.075 1.00 6.58 C </line> <line>ATOM 427 CA TYR A 54 5.625 10.574 29.200 1.00 6.46 C </line> </atom-coordinate> <distance-map> <line> TYR ASP THR SER ARG ASP GLY ALA ASN TYR ASN THR </line> <line> CA CA CA CA CA CA CA CA CA CA CA CA </line> <line>THR CA 4.93 5.48 6.71 10.46 12.85 14.84 15.25 12.60 9.79 6.55 3.79 </line> <line>ASN CA 6.98 5.06 5.46 8.54 10.50 11.89 11.81 9.39 6.39 3.80 </line> <line>TYR CA 8.91 6.43 4.24 6.06 7.04 8.92 8.95 6.08 3.80 </line> <line>ASN CA 11.31 7.93 5.81 5.40 5.59 5.86 5.48 3.82 </line> <line>ALA CA 14.56 11.46 8.65 7.30 5.13 5.49 3.79 </line> <line>GLY CA 16.51 12.98 10.56 8.27 6.13 3.80 </line> <line>ASP CA 15.02 11.62 8.94 5.67 3.85 </line> <line>ARG CA 13.18 10.35 6.87 3.83 </line> <line>SER CA 9.81 6.94 3.82 </line> <line>THR CA 6.34 3.80 </line> <line>ASP CA 3.81 </line> <line>TYR CA </line> </distance-map> <n14> <line>THR CA 291</line> <line>ASN CA 262</line> <line>TYR CA 229</line> <line>ASN CA 192</line> <line>ALA CA 139</line> <line>GLY CA 121</line> <line>ASP CA 164</line> <line>ARG CA 198</line> <line>SER CA 261</line> <line>THR CA 319</line> <line>ASP CA 410</line> <line>TYR CA 438</line> </n14> </entryChain> <parallel> <x>54.448001861572266</x> <y>13.616000175476074</y> <z>89.17500305175781</z> </parallel> <rotation> <x>-0.4020000100135803</x> <y>0.3970000147819519</y> <z>0.824999988079071</z> <x>-0.8040000200271606</x> <y>0.27799999713897705</y> <z>-0.5249999761581421</z> <x>-0.43799999356269836</x> <y>-0.875</y> <z>0.2070000022649765</z> </rotation> <rmsd>0.7272689938545227</rmsd> <dmax>1.3731060028076172</dmax> </indel> <indel> <confEVID></confEVID> <index>1</index> <entryChain> <pdbID>2G4N</pdbID> <pdbChain>F</pdbChain> <entryIDChain>2G4NF</entryIDChain> <sequence>KILDK-VGINY</sequence> <secondary-structure>HHHH - GGG</secondary-structure> <atom-coordinate> <line>ATOM 5630 CA LYS F 94 38.396 13.940 122.868 1.00 39.73 C </line> <line>ATOM 5639 CA ILE F 95 41.516 15.589 124.251 1.00 36.30 C </line> <line>ATOM 5647 CA LEU F 96 39.496 18.085 126.226 1.00 36.26 C </line> <line>ATOM 5655 CA ASP F 97 37.175 15.237 127.305 1.00 38.33 C </line> <line>ATOM 5663 CA LYS F 98 40.090 13.237 128.636 1.00 37.69 C </line> <line>ATOM 5672 CA VAL F 99 42.854 15.597 129.808 1.00 38.35 C </line> <line>ATOM 5679 CA GLY F 100 41.256 19.059 129.215 1.00 37.02 C </line> <line>ATOM 5683 CA ILE F 101 42.672 22.345 127.896 1.00 38.18 C </line> <line>ATOM 5691 CA ASN F 102 45.947 21.999 129.829 1.00 39.98 C </line> <line>ATOM 5699 CA TYR F 103 47.150 19.720 127.022 1.00 40.59 C </line> </atom-coordinate> <distance-map> <line> TYR ASN ILE GLY VAL LYS ASP LEU ILE LYS </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>LYS CA 11.28 13.05 10.69 8.64 8.41 6.05 4.78 5.45 3.79 </line> <line>ILE CA 7.52 9.58 7.76 6.06 5.72 5.18 5.32 3.77 </line> <line>LEU CA 7.87 8.36 5.57 3.60 5.50 5.45 3.83 </line> <line>ASP CA 10.94 11.36 9.00 5.91 6.22 3.78 </line> <line>LYS CA 9.72 10.61 9.50 5.97 3.82 </line> <line>VAL CA 6.57 7.11 7.02 3.86 </line> <line>GLY CA 6.32 5.57 3.81 </line> <line>ILE CA 5.26 3.82 </line> <line>ASN CA 3.81 </line> <line>TYR CA </line> </distance-map> <n14> <line>LYS CA 310</line> <line>ILE CA 351</line> <line>LEU CA 311</line> <line>ASP CA 226</line> <line>LYS CA 207</line> <line>VAL CA 236</line> <line>GLY CA 273</line> <line>ILE CA 353</line> <line>ASN CA 276</line> <line>TYR CA 345</line> </n14> </entryChain> <entryChain> <pdbID>1GB5</pdbID> <pdbChain>A</pdbChain> <entryIDChain>1GB5A</entryIDChain> <sequence>RVVRDPQGIRA</sequence> <secondary-structure>HHH GGGG</secondary-structure> <atom-coordinate> <line>ATOM 751 CA ARG A 98 16.168 15.967 38.386 1.00 5.21 C </line> <line>ATOM 762 CA VAL A 99 16.992 12.987 36.154 1.00 6.52 C </line> <line>ATOM 769 CA VAL A 100 20.360 14.395 35.098 1.00 6.35 C </line> <line>ATOM 776 CA ARG A 101 21.412 15.125 38.687 1.00 10.66 C </line> <line>ATOM 787 CA ASP A 102 21.788 11.361 39.032 1.00 11.23 C </line> <line>ATOM 795 CA PRO A 103 25.206 9.718 38.350 1.00 10.77 C </line> <line>ATOM 802 CA GLN A 104 24.470 8.845 34.705 1.00 12.76 C </line> <line>ATOM 811 CA GLY A 105 23.430 12.368 33.742 1.00 11.42 C </line> <line>ATOM 815 CA ILE A 106 21.928 12.499 30.264 1.00 10.87 C </line> <line>ATOM 823 CA ARG A 107 23.091 8.903 29.654 1.00 9.96 C </line> <line>ATOM 834 CA ALA A 108 19.937 7.797 31.487 1.00 9.18 C </line> </atom-coordinate> <distance-map> <line> ALA ARG ILE GLY GLN PRO ASP ARG VAL VAL ARG </line> <line> CA CA CA CA CA CA CA CA CA CA CA </line> <line>ARG CA 11.34 13.19 10.54 9.34 11.54 10.99 7.29 5.32 5.55 3.81 </line> <line>VAL CA 7.58 9.80 7.70 6.90 8.67 9.11 5.82 5.52 3.80 </line> <line>VAL CA 7.53 8.20 5.42 3.92 6.92 7.48 5.17 3.81 </line> <line>ARG CA 10.38 11.10 8.84 6.01 8.04 6.61 3.80 </line> <line>ASP CA 8.55 9.78 8.84 5.63 5.68 3.85 </line> <line>PRO CA 8.86 8.99 9.16 5.60 3.82 </line> <line>GLN CA 5.66 5.24 6.29 3.80 </line> <line>GLY CA 6.18 5.37 3.79 </line> <line>ILE CA 5.25 3.83 </line> <line>ARG CA 3.81 </line> <line>ALA CA </line> </distance-map> <n14> <line>ARG CA 334</line> <line>VAL CA 387</line> <line>VAL CA 342</line> <line>ARG CA 244</line> <line>ASP CA 226</line> <line>PRO CA 173</line> <line>GLN CA 220</line> <line>GLY CA 300</line> <line>ILE CA 387</line> <line>ARG CA 310</line> <line>ALA CA 337</line> </n14> </entryChain> <parallel> <x>19.613000869750977</x> <y>3.693000078201294</y> <z>91.26699829101562</z> </parallel> <rotation> <x>-0.23899999260902405</x> <y>0.20600000023841858</y> <z>0.9490000009536743</z> <x>-0.878000020980835</x> <y>0.3720000088214874</y> <z>-0.3019999861717224</z> <x>-0.41499999165534973</x> <y>-0.9049999713897705</y> <z>0.09200000017881393</z> </rotation> <rmsd>1.0400919914245605</rmsd> <dmax>2.315160036087036</dmax> </indel> <indel> <confEVID></confEVID> <index>2</index> <entryChain> <pdbID>2G4N</pdbID> <pdbChain>F</pdbChain> <entryIDChain>2G4NF</entryIDChain> <sequence>ALCSE-KLDQW</sequence> <secondary-structure> - GGGG</secondary-structure> <atom-coordinate> <line>ATOM 5757 CA ALA F 109 50.490 30.491 130.394 1.00 40.14 C </line> <line>ATOM 5762 CA LEU F 110 49.413 33.080 127.746 1.00 37.41 C </line> <line>ATOM 5770 CA CYS F 111 45.743 32.564 126.954 1.00 36.96 C </line> <line>ATOM 5776 CA SER F 112 43.816 32.690 130.254 1.00 32.33 C </line> <line>ATOM 5782 CA GLU F 113 44.083 36.550 130.540 1.00 31.11 C </line> <line>ATOM 5791 CA LYS F 114 43.902 39.584 128.332 1.00 31.21 C </line> <line>ATOM 5800 CA LEU F 115 41.570 38.167 125.655 1.00 32.58 C </line> <line>ATOM 5808 CA ASP F 116 40.250 41.187 123.740 1.00 37.80 C </line> <line>ATOM 5816 CA GLN F 117 43.484 41.292 121.628 1.00 40.53 C </line> <line>ATOM 5825 CA TRP F 118 42.490 37.933 120.077 1.00 41.93 C </line> </atom-coordinate> <distance-map> <line> TRP GLN ASP LEU LYS GLU SER CYS LEU ALA </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>ALA CA 15.03 15.58 16.23 12.69 11.42 8.82 7.03 6.22 3.86 </line> <line>LEU CA 11.41 11.83 12.87 9.58 8.54 6.95 6.15 3.79 </line> <line>CYS CA 9.31 10.47 10.72 7.11 7.39 5.61 3.82 </line> <line>SER CA 11.52 12.19 11.28 7.50 7.16 3.88 </line> <line>GLU CA 10.67 10.11 9.08 5.73 3.76 </line> <line>LYS CA 8.54 6.93 6.08 3.82 </line> <line>LEU CA 5.66 5.44 3.81 </line> <line>ASP CA 5.39 3.86 </line> <line>GLN CA 3.83 </line> <line>TRP CA </line> </distance-map> <n14> <line>ALA CA 198</line> <line>LEU CA 247</line> <line>CYS CA 297</line> <line>SER CA 251</line> <line>GLU CA 196</line> <line>LYS CA 176</line> <line>LEU CA 235</line> <line>ASP CA 180</line> <line>GLN CA 214</line> <line>TRP CA 294</line> </n14> </entryChain> <entryChain> <pdbID>1GB5</pdbID> <pdbChain>A</pdbChain> <entryIDChain>1GB5A</entryIDChain> <sequence>NRCQNRDVRQY</sequence> <secondary-structure>H </secondary-structure> <atom-coordinate> <line>ATOM 890 CA ASN A 114 22.073 5.857 20.388 1.00 6.70 C </line> <line>ATOM 898 CA ARG A 115 21.594 9.133 18.538 1.00 9.92 C </line> <line>ATOM 909 CA CYS A 116 23.292 12.071 20.260 1.00 8.02 C </line> <line>ATOM 915 CA GLN A 117 26.336 10.779 22.119 1.00 7.85 C </line> <line>ATOM 924 CA ASN A 118 29.575 11.354 20.207 1.00 9.92 C </line> <line>ATOM 932 CA ARG A 119 27.690 13.027 17.397 1.00 10.48 C </line> <line>ATOM 943 CA ASP A 120 27.655 16.396 15.666 1.00 12.30 C </line> <line>ATOM 951 CA VAL A 121 24.516 17.884 17.284 1.00 10.82 C </line> <line>ATOM 958 CA ARG A 122 25.167 21.485 16.217 1.00 16.72 C </line> <line>ATOM 969 CA GLN A 123 22.380 21.316 13.628 1.00 14.18 C </line> <line>ATOM 978 CA TYR A 124 19.686 21.242 16.324 1.00 8.92 C </line> </atom-coordinate> <distance-map> <line> TYR GLN ARG VAL ASP ARG ASN GLN CYS ARG ASN </line> <line> CA CA CA CA CA CA CA CA CA CA CA </line> <line>ASN CA 16.09 16.88 16.47 12.66 12.83 9.59 9.30 6.74 6.33 3.79 </line> <line>ARG CA 12.46 13.16 13.07 9.31 9.89 7.32 8.45 6.17 3.81 </line> <line>CYS CA 10.61 11.41 10.42 6.64 7.67 5.33 6.32 3.79 </line> <line>GLN CA 13.68 14.10 12.28 8.78 8.66 5.40 3.80 </line> <line>ASN CA 14.51 13.94 11.75 8.76 7.05 3.77 </line> <line>ARG CA 11.52 10.54 8.90 5.80 3.79 </line> <line>ASP CA 9.35 7.50 5.69 3.83 </line> <line>VAL CA 5.96 5.45 3.81 </line> <line>ARG CA 5.49 3.81 </line> <line>GLN CA 3.81 </line> <line>TYR CA </line> </distance-map> <n14> <line>ASN CA 218</line> <line>ARG CA 262</line> <line>CYS CA 310</line> <line>GLN CA 276</line> <line>ASN CA 192</line> <line>ARG CA 217</line> <line>ASP CA 199</line> <line>VAL CA 283</line> <line>ARG CA 236</line> <line>GLN CA 233</line> <line>TYR CA 335</line> </n14> </entryChain> <parallel> <x>19.881999969482422</x> <y>22.41900062561035</y> <z>109.11699676513672</z> </parallel> <rotation> <x>-0.3889999985694885</x> <y>0.414000004529953</y> <z>0.8230000138282776</z> <x>-0.7379999756813049</x> <y>0.39399999380111694</y> <z>-0.5479999780654907</z> <x>-0.5509999990463257</x> <y>-0.8199999928474426</y> <z>0.15199999511241913</z> </rotation> <rmsd>1.2462290525436401</rmsd> <dmax>2.5469470024108887</dmax> </indel> |