NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1I57A-2QCTA
confEVID 1I57A-2QCTA
pdbIDA 1I57
pdbIDB 2QCT
pdbChainA A
pdbChainB A
identity 0.322899997234344
indelSize 3
alignment <alignment>
<seq1>EMEKEFEQIDKSGSWAAIYQDIR------HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQED----NDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDS</seq1>
<seq2>---QREILQKFLDEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEF--GPFSVSCEAEKRKSDYIIRTLKVKFN--SETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQ--EDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAVLELFKRQM---</seq2>
<ss_1> HHHHHHHHH HHHHHHHHH------HH HHHH GGG ---- EEEEEEE EEEEEE HHHHHHHHHH EEEE EEE EEE EEEE EEE EEEEEEEEEE EEEEEEEEE HHHHHHHHHHH EEEEE HHHHHHHHHHHHHHHH HHHHHHHH HHHHHHHHHHHHHHHHHHHH </ss_1>
<ss_2>--- HHHHHHHH HHHH HHHH EEEEE EEEE HHHHHHHHHH EEEE EEE-- EEEE EEE EEEEEEEEE -- EEEEEEEEE HHHHHHHHHH -- EEEE HHHHHHHHHHHHHHHH HHHHHHHH HHHHHHHHHHHHHHHH ---</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1I57</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1I57A</entryIDChain>
<sequence>LHQED----NDYIN</sequence>
<secondary-structure> ---- E</secondary-structure>
<atom-coordinate>
<line>ATOM 479 CA LEU A 59 1.094 57.700 46.622 1.00 24.39 C </line>
<line>ATOM 487 CA HIS A 60 3.809 56.275 48.875 1.00 29.78 C </line>
<line>ATOM 497 CA GLN A 61 5.347 54.432 45.892 1.00 45.78 C </line>
<line>ATOM 506 CA GLU A 62 8.912 55.070 44.794 1.00 50.80 C </line>
<line>ATOM 515 CA ASP A 63 8.315 54.458 41.106 1.00100.00 C </line>
<line>ATOM 523 CA ASN A 64 5.630 57.082 40.531 1.00 36.67 C </line>
<line>ATOM 531 CA ASP A 65 3.827 58.862 43.384 1.00 25.15 C </line>
<line>ATOM 539 CA TYR A 66 1.232 60.411 41.136 1.00 24.00 C </line>
<line>ATOM 551 CA ILE A 67 -2.503 60.136 41.366 1.00 21.39 C </line>
<line>ATOM 559 CA ASN A 68 -5.116 62.604 40.213 1.00 27.57 C </line>
</atom-coordinate>
<distance-map>
<line> ASN ILE TYR ASP ASN ASP GLU GLN HIS LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 10.18 6.82 6.12 4.39 7.62 9.65 8.45 5.41 3.80 </line>
<line>HIS CA 13.96 10.54 9.15 6.07 8.58 9.16 6.64 3.83 </line>
<line>GLN CA 14.44 10.71 8.68 5.31 5.99 5.63 3.78 </line>
<line>GLU CA 16.57 12.95 10.04 6.50 5.74 3.79 </line>
<line>ASP CA 15.73 12.22 9.25 6.69 3.80 </line>
<line>ASN CA 12.09 8.73 5.55 3.82 </line>
<line>ASP CA 10.20 6.76 3.77 </line>
<line>TYR CA 6.78 3.75 </line>
<line>ILE CA 3.77 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>LEU CA 373</line>
<line>HIS CA 266</line>
<line>GLN CA 252</line>
<line>GLU CA 159</line>
<line>ASP CA 178</line>
<line>ASN CA 267</line>
<line>ASP CA 326</line>
<line>TYR CA 404</line>
<line>ILE CA 505</line>
<line>ASN CA 531</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2QCT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QCTA</entryIDChain>
<sequence>LSLITSDEDSSYIN</sequence>
<secondary-structure> E</secondary-structure>
<atom-coordinate>
<line>ATOM 493 CA LEU A 73 -28.259-201.150 17.335 1.00 55.11 C </line>
<line>ATOM 501 CA SER A 74 -31.886-201.171 16.175 1.00 58.79 C </line>
<line>ATOM 507 CA LEU A 75 -33.108-198.550 18.620 1.00 61.94 C </line>
<line>ATOM 515 CA ILE A 76 -33.320-195.426 16.485 1.00 67.71 C </line>
<line>ATOM 523 CA THR A 77 -33.794-191.978 17.988 1.00 73.58 C </line>
<line>ATOM 530 CA SER A 78 -33.187-189.940 14.831 1.00 79.50 C </line>
<line>ATOM 536 CA ASP A 79 -32.876-189.767 11.040 1.00 86.27 C </line>
<line>ATOM 544 CA GLU A 80 -29.139-190.126 11.549 1.00 84.55 C </line>
<line>ATOM 553 CA ASP A 81 -28.661-192.909 14.086 1.00 76.99 C </line>
<line>ATOM 561 CA SER A 82 -27.013-195.847 12.350 1.00 67.11 C </line>
<line>ATOM 567 CA SER A 83 -26.772-199.437 13.510 1.00 57.88 C </line>
<line>ATOM 573 CA TYR A 84 -23.122-198.967 14.402 1.00 47.88 C </line>
<line>ATOM 585 CA ILE A 85 -20.965-199.017 17.510 1.00 44.80 C </line>
<line>ATOM 593 CA ASN A 86 -17.536-200.471 18.329 1.00 42.47 C </line>
</atom-coordinate>
<distance-map>
<line> ASN ILE TYR SER SER ASP GLU ASP SER THR ILE LEU SER LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 10.77 7.30 5.92 4.10 5.14 3.27 5.85 7.81 5.53 5.57 5.13 5.02 3.81 </line>
<line>SER CA 14.51 11.00 8.94 5.77 6.19 3.84 5.38 5.23 1.87 2.63 1.47 2.73 </line>
<line>LEU CA 15.57 12.19 10.84 8.14 8.74 6.35 8.11 7.58 3.79 0.93 2.15 </line>
<line>ILE CA 15.89 12.40 10.41 7.19 7.54 5.24 6.47 5.46 1.66 1.58 </line>
<line>THR CA 16.26 12.84 11.26 8.33 8.82 6.45 7.95 7.01 3.21 </line>
<line>SER CA 16.04 12.51 10.07 6.55 6.65 4.59 5.21 3.80 </line>
<line>ASP CA 16.98 13.55 10.32 6.58 6.01 5.20 3.77 </line>
<line>GLU CA 13.44 10.12 6.66 3.07 2.27 2.58 </line>
<line>ASP CA 11.91 8.42 5.55 1.97 2.39 </line>
<line>SER CA 11.21 7.95 4.40 1.18 </line>
<line>SER CA 10.42 7.05 3.76 </line>
<line>TYR CA 6.83 3.78 </line>
<line>ILE CA 3.53 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>LEU CA 560</line>
<line>SER CA 390</line>
<line>LEU CA 407</line>
<line>ILE CA 341</line>
<line>THR CA 368</line>
<line>SER CA 303</line>
<line>ASP CA 219</line>
<line>GLU CA 358</line>
<line>ASP CA 436</line>
<line>SER CA 446</line>
<line>SER CA 499</line>
<line>TYR CA 612</line>
<line>ILE CA 793</line>
<line>ASN CA 847</line>
</n14>
</entryChain>
<parallel>
<x>34.43000030517578</x>
<y>254.6020050048828</y>
<z>28.18400001525879</z>
</parallel>
<rotation>
<x>-0.7429999709129333</x>
<y>0.30799999833106995</y>
<z>-0.593999981880188</z>
<x>0.5040000081062317</x>
<y>-0.328000009059906</y>
<z>-0.7990000247955322</z>
<x>-0.4410000145435333</x>
<y>-0.8930000066757202</y>
<z>0.08900000154972076</z>
</rotation>
<rmsd>1.9469410181045532</rmsd>
<dmax>3.2864460945129395</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2QCT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QCTA</entryIDChain>
<sequence>KVKFN--SETRT</sequence>
<secondary-structure>EEE -- EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1319 CA LYS A 175 -30.792-193.237 36.876 1.00 52.16 C </line>
<line>ATOM 1328 CA VAL A 176 -31.386-193.246 33.104 1.00 55.42 C </line>
<line>ATOM 1335 CA LYS A 177 -34.645-191.625 32.040 1.00 61.70 C </line>
<line>ATOM 1344 CA PHE A 178 -35.126-192.281 28.326 1.00 67.16 C </line>
<line>ATOM 1355 CA ASN A 179 -38.713-191.223 27.718 1.00 70.20 C </line>
<line>ATOM 1363 CA SER A 180 -40.796-190.908 30.829 1.00 71.17 C </line>
<line>ATOM 1369 CA GLU A 181 -39.431-194.395 31.529 1.00 65.92 C </line>
<line>ATOM 1378 CA THR A 182 -36.735-194.816 34.208 1.00 58.04 C </line>
<line>ATOM 1385 CA ARG A 183 -34.124-197.570 34.583 1.00 47.69 C </line>
<line>ATOM 1396 CA THR A 184 -31.395-197.946 37.182 1.00 42.79 C </line>
</atom-coordinate>
<distance-map>
<line> THR ARG THR GLU SER ASN PHE LYS VAL LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 0.68 4.04 6.51 10.16 11.69 12.11 9.59 6.18 3.82 </line>
<line>VAL CA 4.08 3.11 5.46 8.20 9.68 9.09 6.07 3.43 </line>
<line>LYS CA 6.08 2.60 3.01 4.81 6.27 5.94 3.75 </line>
<line>PHE CA 9.61 6.34 6.10 5.37 6.20 3.64 </line>
<line>ASN CA 11.96 8.26 6.78 3.88 3.74 </line>
<line>SER CA 11.35 7.66 5.28 1.53 </line>
<line>GLU CA 9.83 6.12 3.80 </line>
<line>THR CA 6.11 2.64 </line>
<line>ARG CA 3.77 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>LYS CA 627</line>
<line>VAL CA 653</line>
<line>LYS CA 492</line>
<line>PHE CA 470</line>
<line>ASN CA 326</line>
<line>SER CA 235</line>
<line>GLU CA 278</line>
<line>THR CA 380</line>
<line>ARG CA 489</line>
<line>THR CA 590</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1I57</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1I57A</entryIDChain>
<sequence>ELENLTTQETRE</sequence>
<secondary-structure>EEEE EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1311 CA GLU A 159 -12.475 44.714 52.949 1.00 19.56 C </line>
<line>ATOM 1320 CA LEU A 160 -9.186 46.102 51.826 1.00 29.52 C </line>
<line>ATOM 1328 CA GLU A 161 -6.141 43.894 52.464 1.00 26.63 C </line>
<line>ATOM 1337 CA ASN A 162 -2.490 44.922 52.158 1.00 29.01 C </line>
<line>ATOM 1345 CA LEU A 163 -1.065 41.637 50.828 1.00 34.88 C </line>
<line>ATOM 1353 CA THR A 164 2.407 42.794 51.843 1.00 65.57 C </line>
<line>ATOM 1360 CA THR A 165 1.517 42.742 55.549 1.00 43.18 C </line>
<line>ATOM 1367 CA GLN A 166 -1.822 40.940 55.479 1.00 57.45 C </line>
<line>ATOM 1376 CA GLU A 167 -3.239 43.814 57.452 1.00 24.17 C </line>
<line>ATOM 1385 CA THR A 168 -6.921 44.296 56.594 1.00 40.66 C </line>
<line>ATOM 1392 CA ARG A 169 -9.293 47.239 56.858 1.00 20.35 C </line>
<line>ATOM 1403 CA GLU A 170 -12.987 47.787 56.387 1.00 30.56 C </line>
</atom-coordinate>
<distance-map>
<line> GLU ARG THR GLU GLN THR THR LEU ASN GLU LEU GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 4.64 5.64 6.66 10.31 11.58 14.37 15.05 12.01 10.02 6.41 3.74 </line>
<line>LEU CA 6.17 5.16 5.58 8.50 9.71 11.82 12.06 9.32 6.81 3.82 </line>
<line>GLU CA 8.80 6.36 4.22 5.77 6.04 8.34 8.64 5.79 3.81 </line>
<line>ASN CA 11.67 8.59 6.30 5.46 5.23 5.68 5.35 3.82 </line>
<line>LEU CA 14.52 11.64 8.64 7.30 4.76 5.49 3.80 </line>
<line>THR CA 16.81 13.48 10.58 8.02 5.88 3.81 </line>
<line>THR CA 15.38 11.78 8.64 5.23 3.79 </line>
<line>GLN CA 13.13 9.87 6.21 3.76 </line>
<line>GLU CA 10.58 6.98 3.81 </line>
<line>THR CA 7.00 3.79 </line>
<line>ARG CA 3.76 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>GLU CA 396</line>
<line>LEU CA 438</line>
<line>GLU CA 339</line>
<line>ASN CA 308</line>
<line>LEU CA 238</line>
<line>THR CA 201</line>
<line>THR CA 156</line>
<line>GLN CA 173</line>
<line>GLU CA 202</line>
<line>THR CA 283</line>
<line>ARG CA 321</line>
<line>GLU CA 359</line>
</n14>
</entryChain>
<parallel>
<x>-30.535999298095703</x>
<y>-236.50599670410156</y>
<z>-21.889999389648438</z>
</parallel>
<rotation>
<x>-0.5910000205039978</x>
<y>-0.0430000014603138</y>
<z>-0.8050000071525574</z>
<x>0.4880000054836273</x>
<y>-0.8140000104904175</y>
<z>-0.3149999976158142</z>
<x>-0.6420000195503235</x>
<y>-0.5789999961853027</y>
<z>0.5019999742507935</z>
</rotation>
<rmsd>0.9376159906387329</rmsd>
<dmax>2.0170300006866455</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>2QCT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QCTA</entryIDChain>
<sequence>VRCYQ--EDDSV</sequence>
<secondary-structure>H -- </secondary-structure>
<atom-coordinate>
<line>ATOM 1634 CA VAL A 212 -20.264-206.879 40.212 1.00 44.77 C </line>
<line>ATOM 1641 CA ARG A 213 -21.631-210.425 40.451 1.00 47.07 C </line>
<line>ATOM 1652 CA CYS A 214 -23.317-209.394 43.674 1.00 54.06 C </line>
<line>ATOM 1658 CA TYR A 215 -25.533-207.081 41.628 1.00 54.50 C </line>
<line>ATOM 1670 CA GLN A 216 -26.071-209.276 38.584 1.00 55.18 C </line>
<line>ATOM 1679 CA GLU A 217 -25.580-213.034 38.223 1.00 65.47 C </line>
<line>ATOM 1688 CA ASP A 218 -28.307-215.209 36.749 1.00 71.01 C </line>
<line>ATOM 1693 CA ASP A 219 -29.660-212.445 34.541 1.00 70.24 C </line>
<line>ATOM 1701 CA SER A 220 -30.293-212.616 30.813 1.00 65.52 C </line>
<line>ATOM 1707 CA VAL A 221 -28.823-209.164 30.280 1.00 55.67 C </line>
</atom-coordinate>
<distance-map>
<line> VAL SER ASP ASP GLU GLN TYR CYS ARG VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 13.11 13.74 10.97 8.76 5.68 6.03 5.46 4.62 1.39 </line>
<line>ARG CA 12.46 12.96 9.97 7.63 4.53 4.82 4.08 3.64 </line>
<line>CYS CA 14.48 14.63 11.12 8.54 5.90 5.79 3.02 </line>
<line>TYR CA 11.82 11.82 8.20 5.61 3.41 3.09 </line>
<line>GLN CA 8.75 8.84 5.41 2.89 0.61 </line>
<line>GLU CA 8.58 8.78 5.50 3.10 </line>
<line>ASP CA 6.49 6.26 2.59 </line>
<line>ASP CA 4.34 3.78 </line>
<line>SER CA 1.56 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>VAL CA 939</line>
<line>ARG CA 879</line>
<line>CYS CA 663</line>
<line>TYR CA 689</line>
<line>GLN CA 798</line>
<line>GLU CA 835</line>
<line>ASP CA 754</line>
<line>ASP CA 728</line>
<line>SER CA 713</line>
<line>VAL CA 803</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1I57</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1I57A</entryIDChain>
<sequence>VRESGSLSPEHG</sequence>
<secondary-structure>HHH E</secondary-structure>
<atom-coordinate>
<line>ATOM 1642 CA VAL A 198 -22.412 59.256 55.319 1.00 26.59 C </line>
<line>ATOM 1649 CA ARG A 199 -22.052 61.542 58.305 1.00 23.56 C </line>
<line>ATOM 1660 CA GLU A 200 -23.706 58.937 60.591 1.00 55.77 C </line>
<line>ATOM 1669 CA SER A 201 -21.227 56.232 59.584 1.00 20.15 C </line>
<line>ATOM 1675 CA GLY A 202 -18.542 58.395 61.144 1.00 29.94 C </line>
<line>ATOM 1679 CA SER A 203 -16.555 58.151 57.878 1.00 37.57 C </line>
<line>ATOM 1685 CA LEU A 204 -16.132 61.975 57.860 1.00 36.98 C </line>
<line>ATOM 1693 CA SER A 205 -14.786 61.908 61.396 1.00 42.17 C </line>
<line>ATOM 1699 CA PRO A 206 -11.390 63.394 62.394 1.00 34.22 C </line>
<line>ATOM 1706 CA GLU A 207 -10.531 59.883 63.608 1.00 51.84 C </line>
<line>ATOM 1715 CA HIS A 208 -10.029 58.703 60.025 1.00 24.28 C </line>
<line>ATOM 1725 CA GLY A 209 -8.207 59.827 57.005 1.00 24.34 C </line>
</atom-coordinate>
<distance-map>
<line> GLY HIS GLU PRO SER LEU SER GLY SER GLU ARG VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 14.32 13.26 14.50 13.74 10.11 7.30 6.49 7.05 5.36 5.44 3.78 </line>
<line>ARG CA 14.01 12.47 12.79 11.57 7.90 5.95 6.47 5.50 5.52 3.84 </line>
<line>GLU CA 15.93 13.69 13.55 13.22 9.44 8.61 7.69 5.22 3.80 </line>
<line>SER CA 13.75 11.48 12.00 12.49 8.77 7.87 5.33 3.78 </line>
<line>GLY CA 11.22 8.59 8.51 8.81 5.15 5.42 3.83 </line>
<line>SER CA 8.56 6.89 8.49 8.63 5.44 3.85 </line>
<line>LEU CA 8.26 7.26 8.29 6.71 3.78 </line>
<line>SER CA 8.18 5.90 5.21 3.84 </line>
<line>PRO CA 7.20 5.43 3.81 </line>
<line>GLU CA 7.00 3.81 </line>
<line>HIS CA 3.70 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>VAL CA 447</line>
<line>ARG CA 399</line>
<line>GLU CA 280</line>
<line>SER CA 313</line>
<line>GLY CA 284</line>
<line>SER CA 381</line>
<line>LEU CA 404</line>
<line>SER CA 292</line>
<line>PRO CA 236</line>
<line>GLU CA 189</line>
<line>HIS CA 284</line>
<line>GLY CA 351</line>
</n14>
</entryChain>
<parallel>
<x>-6.965000152587891</x>
<y>-270.4110107421875</y>
<z>-21.03499984741211</z>
</parallel>
<rotation>
<x>-0.4569999873638153</x>
<y>-0.24899999797344208</y>
<z>-0.8539999723434448</z>
<x>0.4480000138282776</x>
<y>-0.8939999938011169</y>
<z>0.020999999716877937</z>
<x>-0.7680000066757202</x>
<y>-0.3720000088214874</y>
<z>0.5199999809265137</z>
</rotation>
<rmsd>1.508160948753357</rmsd>
<dmax>2.1893470287323</dmax>
</indel>