NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1J3FA-1RSEA
confEVID 1J3FA-1RSEA
pdbIDA 1J3F
pdbIDB 1RSE
pdbChainA A
pdbChainB A
identity 0.849699974060059
indelSize 1
alignment <alignment>
<seq1>MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTGLGAILKKKGHHEAELKPLAQSHAT--KIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQG</seq1>
<seq2>-GLSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQDHATKHKIPIKYLEFISDAIIHVLHSKHPGDFGADAQGAMTKALELFRNDIAAKYKELGFQG</seq2>
<ss_1> HHHHHHHHHHHHHGGG HHHHHHHHHHHHHHH GGGG HHHHHH HHHHHHHHHHHHHHHHHH HHHHHHHHHHHH -- HHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHH </ss_1>
<ss_2>- HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGG HHHHH HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHH HHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1J3F</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1J3FA</entryIDChain>
<sequence>QSHAT--KIPIK</sequence>
<secondary-structure>HHHH -- H</secondary-structure>
<atom-coordinate>
<line>ATOM 724 CA GLN A 91 -3.840 14.042 -0.061 1.00 16.87 C </line>
<line>ATOM 733 CA SER A 92 -1.937 10.798 -0.656 1.00 14.25 C </line>
<line>ATOM 739 CA HIS A 93 -4.275 8.740 1.555 1.00 12.93 C </line>
<line>ATOM 749 CA ALA A 94 -7.695 10.182 0.676 1.00 17.38 C </line>
<line>ATOM 754 CA THR A 95 -7.668 10.716 -3.096 1.00 27.85 C </line>
<line>ATOM 761 CA LYS A 98 -8.280 5.388 -0.099 1.00 16.99 C </line>
<line>ATOM 770 CA ILE A 99 -6.464 4.357 3.084 1.00 12.96 C </line>
<line>ATOM 778 CA PRO A 100 -9.084 3.889 5.835 1.00 10.97 C </line>
<line>ATOM 785 CA ILE A 101 -8.629 4.766 9.494 1.00 10.58 C </line>
<line>ATOM 793 CA LYS A 102 -8.774 1.035 10.202 1.00 11.89 C </line>
</atom-coordinate>
<distance-map>
<line> LYS ILE PRO ILE LYS THR ALA HIS SER GLN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLN CA 17.29 14.15 12.86 10.52 9.73 5.91 5.50 5.56 3.81 </line>
<line>SER CA 16.12 13.57 11.87 8.72 8.36 6.23 5.94 3.82 </line>
<line>HIS CA 12.42 9.89 8.06 5.13 5.48 6.09 3.81 </line>
<line>ALA CA 13.25 10.39 8.26 6.42 4.89 3.81 </line>
<line>THR CA 16.49 13.96 11.33 8.95 6.14 </line>
<line>LYS CA 11.19 9.62 6.17 3.81 </line>
<line>ILE CA 8.19 6.78 3.83 </line>
<line>PRO CA 5.23 3.79 </line>
<line>ILE CA 3.80 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>GLN CA 234</line>
<line>SER CA 261</line>
<line>HIS CA 330</line>
<line>ALA CA 261</line>
<line>THR CA 195</line>
<line>LYS CA 267</line>
<line>ILE CA 356</line>
<line>PRO CA 325</line>
<line>ILE CA 332</line>
<line>LYS CA 290</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1RSE</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1RSEA</entryIDChain>
<sequence>QDHATKHKIPIK</sequence>
<secondary-structure>HHHH H</secondary-structure>
<atom-coordinate>
<line>ATOM 705 CA GLN A 91 4.411 34.892 3.871 1.00 17.54 C </line>
<line>ATOM 714 CA ASP A 92 8.108 35.731 3.264 1.00 17.51 C </line>
<line>ATOM 722 CA HIS A 93 9.022 32.253 1.967 1.00 15.43 C </line>
<line>ATOM 732 CA ALA A 94 6.171 32.569 -0.578 1.00 18.55 C </line>
<line>ATOM 737 CA THR A 95 6.273 36.281 -1.631 1.00 23.99 C </line>
<line>ATOM 744 CA LYS A 96 9.893 37.245 -0.913 1.00 24.90 C </line>
<line>ATOM 753 CA HIS A 97 12.083 34.124 -1.328 1.00 19.11 C </line>
<line>ATOM 763 CA LYS A 98 9.721 32.277 -3.739 1.00 19.63 C </line>
<line>ATOM 772 CA ILE A 99 10.130 28.805 -2.226 1.00 17.00 C </line>
<line>ATOM 780 CA PRO A 100 7.800 26.059 -3.540 1.00 17.67 C </line>
<line>ATOM 787 CA ILE A 101 6.196 23.767 -0.902 1.00 20.04 C </line>
<line>ATOM 795 CA LYS A 102 8.118 20.856 -2.465 1.00 17.53 C </line>
</atom-coordinate>
<distance-map>
<line> LYS ILE PRO ILE LYS HIS LYS THR ALA HIS ASP GLN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLN CA 15.84 12.24 12.02 10.34 9.64 9.30 7.65 5.97 5.32 5.64 3.84 </line>
<line>ASP CA 15.94 12.81 11.83 9.07 7.97 6.28 4.79 5.26 5.34 3.82 </line>
<line>HIS CA 12.26 9.39 8.38 5.54 5.75 4.87 5.83 6.06 3.83 </line>
<line>ALA CA 12.02 8.81 7.34 5.71 4.76 6.16 5.99 3.86 </line>
<line>THR CA 15.56 12.54 10.51 8.43 5.69 6.20 3.81 </line>
<line>LYS CA 16.56 13.98 11.68 8.54 5.72 3.84 </line>
<line>HIS CA 13.89 11.92 9.40 5.74 3.85 </line>
<line>LYS CA 11.60 9.64 6.51 3.81 </line>
<line>ILE CA 8.20 6.53 3.83 </line>
<line>PRO CA 5.32 3.85 </line>
<line>ILE CA 3.82 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>GLN CA 267</line>
<line>ASP CA 254</line>
<line>HIS CA 341</line>
<line>ALA CA 286</line>
<line>THR CA 219</line>
<line>LYS CA 202</line>
<line>HIS CA 268</line>
<line>LYS CA 262</line>
<line>ILE CA 350</line>
<line>PRO CA 322</line>
<line>ILE CA 350</line>
<line>LYS CA 296</line>
</n14>
</entryChain>
<parallel>
<x>-13.859999656677246</x>
<y>-23.8439998626709</y>
<z>1.2309999465942383</z>
</parallel>
<rotation>
<x>0.5440000295639038</x>
<y>-0.8029999732971191</y>
<z>-0.24300000071525574</z>
<x>0.11299999803304672</x>
<y>0.3569999933242798</y>
<z>-0.9269999861717224</z>
<x>0.8320000171661377</x>
<y>0.47699999809265137</y>
<z>0.2849999964237213</z>
</rotation>
<rmsd>0.7094299793243408</rmsd>
<dmax>0.9524099826812744</dmax>
</indel>