NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1J3YC-2ZLWD
confEVID 1J3YC-2ZLWD
pdbIDA 1J3Y
pdbIDB 2ZLW
pdbChainA C
pdbChainB D
identity 0.42179998755455
indelSize 1
alignment <alignment>
<seq1>-VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHHH HHHH HHHHHHHH HHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHH --HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>WDKVN--EEEVG</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
<line>ATOM 3444 CA GLY D 24 -32.072 6.515 32.744 1.00 15.19 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU GLU GLU ASN VAL LYS ASP TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.84 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 14.65 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 13.34 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 9.66 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 8.13 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.62 5.30 5.54 3.81 </line>
<line>GLU CA 5.13 5.65 3.79 </line>
<line>GLU CA 5.54 3.81 </line>
<line>VAL CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1J3Y</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1J3YC</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2287 CA TRP C 14 27.352 60.295 17.448 1.00 18.00 C </line>
<line>ATOM 2301 CA GLY C 15 29.137 57.906 19.815 1.00 18.36 C </line>
<line>ATOM 2305 CA LYS C 16 31.970 60.441 19.976 1.00 18.20 C </line>
<line>ATOM 2314 CA VAL C 17 29.546 63.330 20.687 1.00 17.32 C </line>
<line>ATOM 2321 CA GLY C 18 28.216 61.320 23.640 1.00 16.75 C </line>
<line>ATOM 2325 CA ALA C 19 27.090 63.439 26.575 1.00 14.79 C </line>
<line>ATOM 2330 CA HIS C 20 27.832 66.670 24.662 1.00 14.47 C </line>
<line>ATOM 2340 CA ALA C 21 24.707 66.047 22.517 1.00 13.96 C </line>
<line>ATOM 2345 CA GLY C 22 22.422 68.291 24.569 1.00 13.44 C </line>
<line>ATOM 2349 CA GLU C 23 24.921 71.148 24.426 1.00 13.85 C </line>
<line>ATOM 2358 CA TYR C 24 25.412 70.695 20.668 1.00 11.21 C </line>
<line>ATOM 2370 CA GLY C 25 21.635 70.706 20.147 1.00 11.48 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.18 11.06 13.13 11.79 8.11 9.64 9.66 6.34 4.95 5.27 3.81 </line>
<line>GLY CA 14.84 13.35 14.64 13.25 9.65 10.10 8.97 5.21 5.51 3.81 </line>
<line>LYS CA 14.57 12.19 13.57 13.19 9.52 8.83 8.74 5.32 3.84 </line>
<line>VAL CA 10.83 8.45 9.82 9.51 5.84 5.47 6.38 3.81 </line>
<line>GLY CA 11.98 10.23 10.40 9.11 5.99 5.46 3.79 </line>
<line>ALA CA 11.13 9.51 8.29 7.03 5.38 3.83 </line>
<line>HIS CA 8.66 6.17 5.35 5.65 3.84 </line>
<line>ALA CA 6.06 5.05 5.45 3.80 </line>
<line>GLY CA 5.10 5.47 3.80 </line>
<line>GLU CA 5.41 3.82 </line>
<line>TYR CA 3.81 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 389</line>
<line>GLY CA 253</line>
<line>LYS CA 247</line>
<line>VAL CA 315</line>
<line>GLY CA 232</line>
<line>ALA CA 200</line>
<line>HIS CA 261</line>
<line>ALA CA 331</line>
<line>GLY CA 288</line>
<line>GLU CA 307</line>
<line>TYR CA 364</line>
<line>GLY CA 407</line>
</n14>
</entryChain>
<parallel>
<x>-64.38899993896484</x>
<y>-52.56399917602539</y>
<z>6.046000003814697</z>
</parallel>
<rotation>
<x>-0.5239999890327454</x>
<y>-0.3720000088214874</y>
<z>-0.765999972820282</z>
<x>0.24400000274181366</x>
<y>-0.9269999861717224</y>
<z>0.28299999237060547</z>
<x>-0.8159999847412109</x>
<y>-0.039000000804662704</y>
<z>0.5759999752044678</z>
</rotation>
<rmsd>1.6465810537338257</rmsd>
<dmax>3.3725359439849854</dmax>
</indel>