NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1A5CB-2QUVA
confEVID 1A5CB-2QUVA
pdbIDA 1A5C
pdbIDB 2QUV
pdbChainA B
pdbChainB A
identity 0.552299976348877
indelSize 3
alignment <alignment>
<seq1>------LPADVAEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTK-GLGKFISGAILFEETLFQKNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALG-PHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAGG---</seq1>
<seq2>PHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGE--HTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSISNHAY</seq2>
<ss_1>------ HHHHHHHHHHHGGG EEEE HHHHHHHHH HHHHHHHHHHHHH - EEEE HHHH HHHHHH EEEE EEEEE EEEEE HHHHHHHHHH EEEEEEEE HHHHHHHHHHHHHHHHHHHH EEEEEEEEE HHHHHHHHHHHHHHHHHHHHH GGG HHHHHHHHHHHHH EEE HHHHHHHHHHHH - EEEE HHHHHHHHHHH GGGHHHHHHHHHHHHHHHHHHH ---</ss_1>
<ss_2> HHHHHHHHHHHHHH EEEE HHHHHHHHH HHHHHHHHHHHH EEEE GGG HHHHHH EEEE EEEEE EEEEE HHHHHHHHHH EEEEEEEE -- HHHHHHHHHHHHHHHHHHH EEEEEEE HHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHH EEEE HHHHHHHHHHHHH EEEEEE HHHHHHHHHHH GGGHHHHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1A5C</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1A5CB</entryIDChain>
<sequence>LFGTK-GLGKF</sequence>
<secondary-structure>HHH - </secondary-structure>
<atom-coordinate>
<line>ATOM 3030 CA LEU B 68 22.315 106.595 131.312 1.00 57.62 C </line>
<line>ATOM 3038 CA PHE B 69 18.545 106.770 131.821 1.00 24.70 C </line>
<line>ATOM 3049 CA GLY B 70 18.939 107.691 135.478 1.00 76.16 C </line>
<line>ATOM 3053 CA THR B 71 21.003 110.855 134.892 1.00 10.50 C </line>
<line>ATOM 3060 CA LYS B 72 18.880 113.454 136.711 1.00 69.19 C </line>
<line>ATOM 3069 CA GLY B 73 18.524 116.411 134.378 1.00 72.05 C </line>
<line>ATOM 3073 CA LEU B 74 19.009 114.368 131.203 1.00 33.81 C </line>
<line>ATOM 3081 CA GLY B 75 15.533 115.255 129.961 1.00 40.16 C </line>
<line>ATOM 3085 CA LYS B 76 16.529 118.807 129.060 1.00 20.16 C </line>
<line>ATOM 3094 CA PHE B 77 19.065 117.659 126.505 1.00 18.30 C </line>
</atom-coordinate>
<distance-map>
<line> PHE LYS GLY LEU GLY LYS THR GLY PHE LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 12.49 13.70 11.08 8.45 10.96 9.38 5.72 5.47 3.81 </line>
<line>PHE CA 12.13 12.51 9.19 7.64 9.97 8.29 5.67 3.79 </line>
<line>GLY CA 13.41 13.06 9.96 7.93 8.80 5.89 3.82 </line>
<line>THR CA 10.97 10.83 8.58 5.47 6.11 3.82 </line>
<line>LYS CA 11.04 9.63 7.75 5.58 3.78 </line>
<line>GLY CA 7.99 6.16 5.46 3.81 </line>
<line>LEU CA 5.74 5.52 3.80 </line>
<line>GLY CA 5.50 3.80 </line>
<line>LYS CA 3.78 </line>
<line>PHE CA </line>
</distance-map>
<n14>
<line>LEU CA 555</line>
<line>PHE CA 498</line>
<line>GLY CA 409</line>
<line>THR CA 386</line>
<line>LYS CA 272</line>
<line>GLY CA 279</line>
<line>LEU CA 397</line>
<line>GLY CA 363</line>
<line>LYS CA 322</line>
<line>PHE CA 428</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2QUV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QUVA</entryIDChain>
<sequence>LLTADDRVNPC</sequence>
<secondary-structure>HH </secondary-structure>
<atom-coordinate>
<line>ATOM 478 CA LEU A 62 17.340 -27.979 59.364 1.00 17.97 C </line>
<line>ATOM 486 CA LEU A 63 17.176 -24.204 59.639 1.00 18.62 C </line>
<line>ATOM 494 CA THR A 64 20.390 -23.975 61.658 1.00 19.47 C </line>
<line>ATOM 501 CA ALA A 65 22.501 -26.194 59.398 1.00 20.15 C </line>
<line>ATOM 506 CA ASP A 66 25.936 -24.636 58.800 1.00 22.73 C </line>
<line>ATOM 514 CA ASP A 67 26.579 -21.811 56.339 1.00 23.81 C </line>
<line>ATOM 522 CA ARG A 68 27.326 -24.264 53.563 1.00 22.63 C </line>
<line>ATOM 533 CA VAL A 69 23.606 -24.337 52.754 1.00 22.23 C </line>
<line>ATOM 540 CA ASN A 70 23.359 -20.541 52.498 1.00 20.94 C </line>
<line>ATOM 548 CA PRO A 71 24.153 -20.238 48.772 1.00 19.28 C </line>
<line>ATOM 555 CA CYS A 72 22.032 -23.366 48.197 1.00 18.47 C </line>
</atom-coordinate>
<distance-map>
<line> CYS PRO ASN VAL ARG ASP ASP ALA THR LEU LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 12.96 14.78 11.78 9.81 12.13 11.51 9.24 5.46 5.53 3.79 </line>
<line>LEU CA 12.46 13.51 10.13 9.42 11.83 10.25 8.81 5.69 3.80 </line>
<line>THR CA 13.57 13.93 10.22 9.47 10.66 8.44 6.27 3.81 </line>
<line>ALA CA 11.56 12.29 8.96 6.99 7.81 6.72 3.82 </line>
<line>ASP CA 11.37 11.09 7.95 6.49 5.43 3.80 </line>
<line>ASP CA 9.45 8.10 5.17 5.30 3.78 </line>
<line>ARG CA 7.59 7.02 5.54 3.81 </line>
<line>VAL CA 4.92 5.74 3.81 </line>
<line>ASN CA 5.31 3.82 </line>
<line>PRO CA 3.82 </line>
<line>CYS CA </line>
</distance-map>
<n14>
<line>LEU CA 569</line>
<line>LEU CA 519</line>
<line>THR CA 428</line>
<line>ALA CA 404</line>
<line>ASP CA 278</line>
<line>ASP CA 252</line>
<line>ARG CA 263</line>
<line>VAL CA 375</line>
<line>ASN CA 340</line>
<line>PRO CA 309</line>
<line>CYS CA 418</line>
</n14>
</entryChain>
<parallel>
<x>-3.1110000610351562</x>
<y>135.9409942626953</y>
<z>76.01000213623047</z>
</parallel>
<rotation>
<x>-0.02199999988079071</x>
<y>0.7509999871253967</y>
<z>0.6600000262260437</z>
<x>-1.0</x>
<y>-0.01600000075995922</y>
<z>-0.014999999664723873</z>
<x>-0.0010000000474974513</x>
<y>-0.6600000262260437</y>
<z>0.7509999871253967</z>
</rotation>
<rmsd>0.8393430113792419</rmsd>
<dmax>1.3820430040359497</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1A5C</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1A5CB</entryIDChain>
<sequence>INALG-PHPWA</sequence>
<secondary-structure>HH - </secondary-structure>
<atom-coordinate>
<line>ATOM 4738 CA ILE B 293 24.894 122.857 110.369 1.00 10.14 C </line>
<line>ATOM 4746 CA ASN B 294 22.378 124.639 112.616 1.00 7.26 C </line>
<line>ATOM 4754 CA ALA B 295 24.544 127.757 112.397 1.00 10.48 C </line>
<line>ATOM 4759 CA LEU B 296 23.315 128.112 108.806 1.00 39.92 C </line>
<line>ATOM 4767 CA GLY B 297 20.275 130.230 109.616 1.00 12.20 C </line>
<line>ATOM 4771 CA PRO B 298 16.735 128.938 110.200 1.00 28.88 C </line>
<line>ATOM 4778 CA HIS B 299 15.812 125.696 108.446 1.00 22.23 C </line>
<line>ATOM 4788 CA PRO B 300 12.351 124.339 107.492 1.00 25.18 C </line>
<line>ATOM 4795 CA TRP B 301 12.897 121.254 109.643 1.00 31.15 C </line>
<line>ATOM 4809 CA ALA B 302 14.684 120.469 112.890 1.00 10.35 C </line>
</atom-coordinate>
<distance-map>
<line> ALA TRP PRO HIS PRO GLY LEU ALA ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 10.78 12.13 12.95 9.71 10.18 8.73 5.71 5.31 3.82 </line>
<line>ASN CA 8.76 10.50 11.26 7.85 7.49 6.68 5.24 3.80 </line>
<line>ALA CA 12.27 13.62 13.58 9.80 8.20 5.66 3.81 </line>
<line>LEU CA 12.23 12.50 11.67 7.89 6.78 3.79 </line>
<line>GLY CA 11.72 11.62 10.10 6.47 3.81 </line>
<line>PRO CA 9.12 8.61 6.91 3.80 </line>
<line>HIS CA 6.95 5.45 3.84 </line>
<line>PRO CA 7.04 3.80 </line>
<line>TRP CA 3.79 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ILE CA 434</line>
<line>ASN CA 405</line>
<line>ALA CA 308</line>
<line>LEU CA 284</line>
<line>GLY CA 206</line>
<line>PRO CA 217</line>
<line>HIS CA 285</line>
<line>PRO CA 263</line>
<line>TRP CA 367</line>
<line>ALA CA 442</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2QUV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QUVA</entryIDChain>
<sequence>INKCPLLKPWA</sequence>
<secondary-structure>HHH E</secondary-structure>
<atom-coordinate>
<line>ATOM 2170 CA ILE A 286 16.575 -30.910 33.178 1.00 17.95 C </line>
<line>ATOM 2178 CA ASN A 287 19.140 -28.117 33.366 1.00 20.15 C </line>
<line>ATOM 2186 CA LYS A 288 21.498 -29.753 30.889 1.00 25.66 C </line>
<line>ATOM 2195 CA CYS A 289 18.697 -30.312 28.387 1.00 25.20 C </line>
<line>ATOM 2201 CA PRO A 290 19.809 -28.674 25.086 1.00 28.25 C </line>
<line>ATOM 2208 CA LEU A 291 16.763 -26.415 24.730 1.00 26.63 C </line>
<line>ATOM 2216 CA LEU A 292 16.211 -22.745 25.454 1.00 25.72 C </line>
<line>ATOM 2224 CA LYS A 293 14.902 -22.223 29.011 1.00 22.06 C </line>
<line>ATOM 2233 CA PRO A 294 13.939 -18.574 29.687 1.00 19.43 C </line>
<line>ATOM 2240 CA TRP A 295 13.265 -19.183 33.397 1.00 17.13 C </line>
<line>ATOM 2254 CA ALA A 296 15.251 -20.531 36.338 1.00 16.90 C </line>
</atom-coordinate>
<distance-map>
<line> ALA TRP PRO LYS LEU LEU PRO CYS LYS ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 10.93 12.19 13.09 9.78 11.25 9.57 9.00 5.27 5.55 3.80 </line>
<line>ASN CA 9.03 10.69 11.47 8.47 10.00 9.12 8.33 5.46 3.79 </line>
<line>LYS CA 12.40 13.63 13.55 10.19 10.32 8.46 6.14 3.80 </line>
<line>CYS CA 13.07 13.36 12.73 8.96 8.49 5.68 3.85 </line>
<line>PRO CA 14.62 14.21 12.56 9.01 6.95 3.81 </line>
<line>LEU CA 13.10 11.82 9.70 6.27 3.78 </line>
<line>LEU CA 11.15 9.19 6.36 3.83 </line>
<line>LYS CA 7.53 5.58 3.83 </line>
<line>PRO CA 7.06 3.82 </line>
<line>TRP CA 3.80 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ILE CA 465</line>
<line>ASN CA 417</line>
<line>LYS CA 326</line>
<line>CYS CA 338</line>
<line>PRO CA 245</line>
<line>LEU CA 270</line>
<line>LEU CA 232</line>
<line>LYS CA 314</line>
<line>PRO CA 281</line>
<line>TRP CA 376</line>
<line>ALA CA 434</line>
</n14>
</entryChain>
<parallel>
<x>2.441999912261963</x>
<y>152.98399353027344</y>
<z>80.61100006103516</z>
</parallel>
<rotation>
<x>0.1679999977350235</x>
<y>0.4350000023841858</y>
<z>0.8849999904632568</z>
<x>-0.9670000076293945</x>
<y>-0.10400000214576721</y>
<z>0.23499999940395355</z>
<x>0.1940000057220459</x>
<y>-0.8949999809265137</y>
<z>0.40299999713897705</z>
</rotation>
<rmsd>1.4192869663238525</rmsd>
<dmax>2.4898719787597656</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>2QUV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QUVA</entryIDChain>
<sequence>LKIGE--HTPSA</sequence>
<secondary-structure>E -- H</secondary-structure>
<atom-coordinate>
<line>ATOM 1147 CA LEU A 151 -4.657 -33.635 39.852 1.00 15.74 C </line>
<line>ATOM 1155 CA LYS A 152 -4.431 -37.331 38.934 1.00 19.67 C </line>
<line>ATOM 1164 CA ILE A 153 -3.984 -39.016 35.575 1.00 21.93 C </line>
<line>ATOM 1172 CA GLY A 154 -6.672 -41.653 35.174 1.00 30.54 C </line>
<line>ATOM 1176 CA GLU A 155 -9.208 -43.048 32.729 1.00 36.91 C </line>
<line>ATOM 1185 CA HIS A 156 -11.367 -39.926 32.807 1.00 32.59 C </line>
<line>ATOM 1195 CA THR A 157 -8.971 -37.661 34.706 1.00 24.07 C </line>
<line>ATOM 1202 CA PRO A 158 -7.957 -34.980 34.979 1.00 20.50 C </line>
<line>ATOM 1209 CA SER A 159 -11.372 -33.880 33.732 1.00 15.20 C </line>
<line>ATOM 1215 CA ALA A 160 -12.306 -30.513 32.241 1.00 12.20 C </line>
</atom-coordinate>
<distance-map>
<line> ALA SER PRO THR HIS GLU GLY ILE LYS LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 11.23 9.09 6.04 7.83 11.59 12.65 9.50 6.91 3.81 </line>
<line>LYS CA 12.38 9.34 5.80 6.21 9.61 9.70 6.15 3.78 </line>
<line>ILE CA 12.36 9.18 5.69 5.24 7.94 7.19 3.79 </line>
<line>GLY CA 12.82 9.20 6.80 4.63 5.53 3.79 </line>
<line>GLU CA 12.92 9.47 8.47 5.74 3.80 </line>
<line>HIS CA 9.48 6.12 6.39 3.80 </line>
<line>THR CA 8.26 4.58 2.88 </line>
<line>PRO CA 6.81 3.80 </line>
<line>SER CA 3.80 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>LEU CA 452</line>
<line>LYS CA 407</line>
<line>ILE CA 362</line>
<line>GLY CA 278</line>
<line>GLU CA 191</line>
<line>HIS CA 201</line>
<line>THR CA 307</line>
<line>PRO CA 359</line>
<line>SER CA 281</line>
<line>ALA CA 262</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1A5C</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1A5CB</entryIDChain>
<sequence>LVIDTAKGKPTD</sequence>
<secondary-structure>E H</secondary-structure>
<atom-coordinate>
<line>ATOM 3714 CA LEU B 156 24.999 101.891 102.042 1.00 6.41 C </line>
<line>ATOM 3722 CA VAL B 157 28.632 102.243 100.977 1.00 31.78 C </line>
<line>ATOM 3729 CA ILE B 158 30.461 104.602 98.633 1.00 12.95 C </line>
<line>ATOM 3737 CA ASP B 159 32.983 103.002 96.282 1.00 43.34 C </line>
<line>ATOM 3745 CA THR B 160 33.261 104.927 93.024 1.00 22.17 C </line>
<line>ATOM 3752 CA ALA B 161 35.661 102.325 91.628 1.00 44.37 C </line>
<line>ATOM 3757 CA LYS B 162 33.340 99.363 92.241 1.00 24.36 C </line>
<line>ATOM 3766 CA GLY B 163 30.344 101.546 91.451 1.00 5.92 C </line>
<line>ATOM 3770 CA LYS B 164 28.926 101.579 94.970 1.00 33.78 C </line>
<line>ATOM 3779 CA PRO B 165 26.325 102.165 96.130 1.00 24.62 C </line>
<line>ATOM 3786 CA THR B 166 24.715 100.131 93.343 1.00 26.00 C </line>
<line>ATOM 3793 CA ASP B 167 21.163 100.867 92.258 1.00 7.34 C </line>
</atom-coordinate>
<distance-map>
<line> ASP THR PRO LYS GLY LYS ALA THR ASP ILE VAL LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 10.56 8.88 6.07 8.10 11.87 13.12 14.91 12.60 9.91 6.99 3.80 </line>
<line>VAL CA 11.56 8.84 5.37 6.05 9.70 10.33 11.70 9.59 6.45 3.80 </line>
<line>ILE CA 11.88 9.00 5.41 4.99 7.81 8.75 9.02 6.28 3.80 </line>
<line>ASP CA 12.67 9.23 6.71 4.50 5.69 5.45 5.41 3.79 </line>
<line>THR CA 12.78 9.80 8.09 5.81 4.73 5.62 3.81 </line>
<line>ALA CA 14.58 11.29 10.37 7.56 5.38 3.81 </line>
<line>LYS CA 12.27 8.73 8.50 5.64 3.79 </line>
<line>GLY CA 9.24 6.10 6.20 3.79 </line>
<line>LYS CA 8.25 4.74 2.91 </line>
<line>PRO CA 6.58 3.81 </line>
<line>THR CA 3.79 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>LEU CA 476</line>
<line>VAL CA 428</line>
<line>ILE CA 370</line>
<line>ASP CA 286</line>
<line>THR CA 233</line>
<line>ALA CA 142</line>
<line>LYS CA 172</line>
<line>GLY CA 215</line>
<line>LYS CA 320</line>
<line>PRO CA 375</line>
<line>THR CA 294</line>
<line>ASP CA 274</line>
</n14>
</entryChain>
<parallel>
<x>-36.64699935913086</x>
<y>-141.1510009765625</y>
<z>-61.09400177001953</z>
</parallel>
<rotation>
<x>0.017999999225139618</x>
<y>-0.9919999837875366</y>
<z>0.12600000202655792</z>
<x>0.7139999866485596</x>
<y>-0.07500000298023224</y>
<z>-0.6959999799728394</z>
<x>0.699999988079071</x>
<y>0.10300000011920929</y>
<z>0.7070000171661377</z>
</rotation>
<rmsd>0.7140939831733704</rmsd>
<dmax>1.4021819829940796</dmax>
</indel>