NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1A5QA-2APQA
confEVID 1A5QA-2APQA
pdbIDA 1A5Q
pdbIDB 2APQ
pdbChainA A
pdbChainB A
identity 0.959699988365173
indelSize 1
alignment <alignment>
<seq1>KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYANCAYKTTQANKHIIVACEGNPYVPVHFDASV</seq1>
<seq2>KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACE--GYVPVAFDASV</seq2>
<ss_1> HHHHHHHHH HHHHHHHH EEEE HHHHGGGGG EEE EEEE EEEEEEE EEEEEEEEEEEEEEEEEE </ss_1>
<ss_2> HHHHHHHHH HHHHHHHH EEEE HHHHGGGGG EEE EEEE EEEEEEE EEEEEEEEEEEEEEEEEE-- </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2APQ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2APQA</entryIDChain>
<sequence>IVACE--GYVPV</sequence>
<secondary-structure>EEEEE-- </secondary-structure>
<atom-coordinate>
<line>ATOM 801 CA ILE A 107 21.628 21.097 67.932 1.00 18.37 C </line>
<line>ATOM 809 CA VAL A 108 22.438 17.506 66.947 1.00 19.00 C </line>
<line>ATOM 816 CA ALA A 109 21.421 14.065 68.231 1.00 19.91 C </line>
<line>ATOM 821 CA CYS A 110 24.471 11.929 69.089 1.00 23.73 C </line>
<line>ATOM 827 CA GLU A 111 24.984 8.166 69.470 1.00 31.45 C </line>
<line>ATOM 836 CA GLY A 112 27.856 5.646 69.574 1.00 35.13 C </line>
<line>ATOM 838 CA TYR A 127 29.971 9.278 70.066 1.00 28.11 C </line>
<line>ATOM 850 CA VAL A 128 29.069 11.222 66.916 1.00 24.77 C </line>
<line>ATOM 857 CA PRO A 129 26.165 13.187 65.358 1.00 21.76 C </line>
<line>ATOM 864 CA VAL A 130 23.415 11.079 63.787 1.00 21.97 C </line>
</atom-coordinate>
<distance-map>
<line> VAL PRO VAL TYR GLY GLU CYS ALA VAL ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 10.99 9.48 12.41 14.62 16.74 13.45 9.67 7.04 3.81 </line>
<line>VAL CA 7.23 5.92 9.14 11.58 13.30 10.00 6.31 3.81 </line>
<line>ALA CA 5.71 5.62 8.26 9.97 10.68 7.00 3.82 </line>
<line>CYS CA 5.47 4.29 5.13 6.18 7.15 3.82 </line>
<line>GLU CA 6.58 6.60 5.71 5.14 3.82 </line>
<line>GLY CA 9.10 8.80 6.30 4.23 </line>
<line>TYR CA 9.25 7.21 3.81 </line>
<line>VAL CA 6.46 3.84 </line>
<line>PRO CA 3.80 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ILE CA 409</line>
<line>VAL CA 454</line>
<line>ALA CA 352</line>
<line>CYS CA 326</line>
<line>GLU CA 239</line>
<line>GLY CA 165</line>
<line>TYR CA 213</line>
<line>VAL CA 285</line>
<line>PRO CA 386</line>
<line>VAL CA 332</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1A5Q</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1A5QA</entryIDChain>
<sequence>IVACEGNPYVPV</sequence>
<secondary-structure>EEEEE </secondary-structure>
<atom-coordinate>
<line>ATOM 816 CA ILE A 107 20.890 19.761 36.262 1.00 18.83 C </line>
<line>ATOM 824 CA VAL A 108 21.792 16.246 35.105 1.00 20.13 C </line>
<line>ATOM 831 CA ALA A 109 21.221 12.806 36.564 1.00 20.88 C </line>
<line>ATOM 836 CA CYS A 110 24.435 10.761 37.062 1.00 25.62 C </line>
<line>ATOM 842 CA GLU A 111 24.822 7.005 37.084 1.00 38.87 C </line>
<line>ATOM 851 CA GLY A 112 27.095 3.976 37.004 1.00 54.13 C </line>
<line>ATOM 855 CA ASN A 113 30.824 3.701 37.112 1.00 67.62 C </line>
<line>ATOM 863 CA PRO A 114 32.310 5.953 36.588 1.00 58.97 C </line>
<line>ATOM 870 CA TYR A 115 29.755 8.538 37.801 1.00 34.78 C </line>
<line>ATOM 882 CA VAL A 116 28.866 10.256 34.435 1.00 21.80 C </line>
<line>ATOM 889 CA PRO A 117 25.821 12.295 33.427 1.00 22.33 C </line>
<line>ATOM 896 CA VAL A 118 23.243 9.935 31.944 1.00 23.75 C </line>
</atom-coordinate>
<distance-map>
<line> VAL PRO VAL TYR PRO ASN GLY GLU CYS ALA VAL ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 10.99 9.39 12.54 14.38 17.92 18.90 16.98 13.37 9.71 6.97 3.81 </line>
<line>VAL CA 7.21 5.89 9.29 11.41 14.79 15.59 13.50 9.92 6.40 3.78 </line>
<line>ALA CA 5.80 5.59 8.34 9.62 13.04 13.24 10.61 6.85 3.84 </line>
<line>CYS CA 5.32 4.18 5.18 5.81 9.24 9.52 7.29 3.78 </line>
<line>GLU CA 6.12 6.51 5.83 5.22 7.58 6.85 3.79 </line>
<line>GLY CA 8.71 9.14 7.01 5.34 5.59 3.74 </line>
<line>ASN CA 11.09 10.61 7.35 5.00 2.75 </line>
<line>PRO CA 10.94 9.61 5.92 3.83 </line>
<line>TYR CA 8.87 6.98 3.88 </line>
<line>VAL CA 6.16 3.80 </line>
<line>PRO CA 3.80 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ILE CA 416</line>
<line>VAL CA 463</line>
<line>ALA CA 367</line>
<line>CYS CA 347</line>
<line>GLU CA 264</line>
<line>GLY CA 176</line>
<line>ASN CA 131</line>
<line>PRO CA 164</line>
<line>TYR CA 230</line>
<line>VAL CA 311</line>
<line>PRO CA 404</line>
<line>VAL CA 355</line>
</n14>
</entryChain>
<parallel>
<x>-0.28200000524520874</x>
<y>0.9480000138282776</y>
<z>32.165000915527344</z>
</parallel>
<rotation>
<x>0.9829999804496765</x>
<y>-0.16899999976158142</y>
<z>0.0729999989271164</z>
<x>0.1720000058412552</x>
<y>0.9850000143051147</y>
<z>-0.028999999165534973</z>
<x>-0.06700000166893005</x>
<y>0.03999999910593033</y>
<z>0.996999979019165</z>
</rotation>
<rmsd>1.3435640335083008</rmsd>
<dmax>3.1151480674743652</dmax>
</indel>