NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1LA6A-1Y7GD
confEVID 1LA6A-1Y7GD
pdbIDA 1LA6
pdbIDB 1Y7G
pdbChainA A
pdbChainB D
identity 0.382600009441376
indelSize 1
alignment <alignment>
<seq1>-SLSDKDKAAVRALWSKIGKS--SDAIGNDALSRMIVVYPQTKIYFSHWPDVT-----PGSPNIKAHGKKVMGGIALAVSKIDDLKTGLMELSEQHAYKLRVDPSNFKILNHCILVVISTMFPKEFTPEAHVSLDKFLSGVALALAERYR</seq1>
<seq2>MHLTPEEKSAVTAL----WGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPEAFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHHHGGG--HHHHHHHHHHHHHHH GGGGG ----- HHHHHHHHHHHHHHHHHHH HHHH HHHHHHH HHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHH----GGG HHHHHHHHHHHHHHH GGGG GGG HHHH HHHHHHHHHHHHHHHHGGG HHHH HHHHHHHH HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1LA6</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1LA6A</entryIDChain>
<sequence>WPDVT-----PGSPN</sequence>
<secondary-structure> ----- HH</secondary-structure>
<atom-coordinate>
<line>ATOM 361 CA TRP A 46 14.535 -1.452 25.791 1.00 38.02 C </line>
<line>ATOM 375 CA PRO A 47 16.722 1.197 27.424 1.00 44.54 C </line>
<line>ATOM 382 CA ASP A 48 18.857 1.792 24.327 1.00 50.65 C </line>
<line>ATOM 390 CA VAL A 49 17.045 1.873 20.992 1.00 52.50 C </line>
<line>ATOM 397 CA THR A 50 19.720 3.805 19.125 1.00 55.76 C </line>
<line>ATOM 404 CA PRO A 51 21.725 2.335 16.214 1.00 55.42 C </line>
<line>ATOM 411 CA GLY A 52 24.361 -0.233 17.154 1.00 56.58 C </line>
<line>ATOM 415 CA SER A 53 23.057 -0.378 20.747 1.00 50.55 C </line>
<line>ATOM 421 CA PRO A 54 23.586 -3.656 22.651 1.00 44.86 C </line>
<line>ATOM 428 CA ASN A 55 19.832 -4.419 22.588 1.00 38.73 C </line>
</atom-coordinate>
<distance-map>
<line> ASN PRO SER GLY PRO THR VAL ASP PRO TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 6.86 9.83 9.96 13.14 12.56 9.95 6.36 5.60 3.80 </line>
<line>PRO CA 8.04 9.67 9.34 12.88 12.33 9.20 6.48 3.81 </line>
<line>ASP CA 6.52 7.41 5.93 9.27 8.62 5.64 3.80 </line>
<line>VAL CA 7.06 8.72 6.42 8.53 6.70 3.79 </line>
<line>THR CA 8.92 9.11 5.59 6.46 3.83 </line>
<line>PRO CA 9.48 8.99 5.45 3.80 </line>
<line>GLY CA 8.22 6.52 3.83 </line>
<line>SER CA 5.49 3.83 </line>
<line>PRO CA 3.83 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>TRP CA 198</line>
<line>PRO CA 152</line>
<line>ASP CA 194</line>
<line>VAL CA 255</line>
<line>THR CA 250</line>
<line>PRO CA 262</line>
<line>GLY CA 238</line>
<line>SER CA 225</line>
<line>PRO CA 207</line>
<line>ASN CA 245</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1Y7G</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>1Y7GD</entryIDChain>
<sequence>FGDLSTPDAVMGNPK</sequence>
<secondary-structure>G HHHH HH</secondary-structure>
<atom-coordinate>
<line>ATOM 3614 CA PHE D 45 9.492 37.359 -40.204 1.00 42.08 C </line>
<line>ATOM 3625 CA GLY D 46 5.745 36.805 -40.224 1.00 44.80 C </line>
<line>ATOM 3629 CA ASP D 47 3.577 33.825 -39.347 1.00 51.87 C </line>
<line>ATOM 3637 CA LEU D 48 5.367 31.457 -36.988 1.00 46.56 C </line>
<line>ATOM 3645 CA SER D 49 1.963 30.346 -35.698 1.00 43.46 C </line>
<line>ATOM 3651 CA THR D 50 2.715 26.745 -36.499 1.00 34.28 C </line>
<line>ATOM 3658 CA PRO D 51 5.650 24.367 -36.900 1.00 28.64 C </line>
<line>ATOM 3665 CA ASP D 52 4.799 24.256 -40.608 1.00 29.38 C </line>
<line>ATOM 3673 CA ALA D 53 4.589 28.059 -40.806 1.00 23.82 C </line>
<line>ATOM 3678 CA VAL D 54 8.008 28.347 -39.152 1.00 24.38 C </line>
<line>ATOM 3685 CA MET D 55 9.638 25.496 -41.025 1.00 29.25 C </line>
<line>ATOM 3693 CA GLY D 56 8.212 26.883 -44.273 1.00 24.31 C </line>
<line>ATOM 3697 CA ASN D 57 9.013 30.533 -43.553 1.00 24.32 C </line>
<line>ATOM 3705 CA PRO D 58 11.689 31.626 -46.011 1.00 33.21 C </line>
<line>ATOM 3712 CA LYS D 59 12.906 34.494 -43.804 1.00 29.76 C </line>
</atom-coordinate>
<distance-map>
<line> LYS PRO ASN GLY MET VAL ALA ASP PRO THR SER LEU ASP GLY PHE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>PHE CA 5.73 8.45 7.62 11.31 11.89 9.19 10.53 13.92 13.95 13.13 11.23 7.89 6.94 3.79 </line>
<line>GLY CA 8.33 9.78 7.82 11.00 11.99 8.82 8.84 12.59 12.87 11.15 8.75 6.26 3.79 </line>
<line>ASP CA 10.36 10.73 7.62 9.69 10.44 7.05 6.03 9.73 9.99 7.68 5.29 3.79 </line>
<line>LEU CA 10.61 11.02 7.57 9.06 8.37 4.62 5.17 8.08 7.10 5.43 3.81 </line>
<line>SER CA 14.24 14.23 10.56 11.16 10.53 7.24 6.18 8.32 7.13 3.76 </line>
<line>THR CA 14.74 13.96 10.19 9.52 8.36 6.13 4.88 5.24 3.80 </line>
<line>PRO CA 14.24 13.12 9.67 8.20 5.85 5.15 5.48 3.81 </line>
<line>ASP CA 13.44 11.44 8.11 5.66 5.01 5.40 3.81 </line>
<line>ALA CA 10.93 9.50 5.77 5.15 5.67 3.81 </line>
<line>VAL CA 9.13 8.45 5.02 5.33 3.78 </line>
<line>MET CA 9.97 8.16 5.67 3.81 </line>
<line>GLY CA 8.95 6.13 3.81 </line>
<line>ASN CA 5.56 3.79 </line>
<line>PRO CA 3.82 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>PHE CA 228</line>
<line>GLY CA 198</line>
<line>ASP CA 202</line>
<line>LEU CA 260</line>
<line>SER CA 192</line>
<line>THR CA 180</line>
<line>PRO CA 219</line>
<line>ASP CA 181</line>
<line>ALA CA 205</line>
<line>VAL CA 294</line>
<line>MET CA 284</line>
<line>GLY CA 226</line>
<line>ASN CA 248</line>
<line>PRO CA 231</line>
<line>LYS CA 249</line>
</n14>
</entryChain>
<parallel>
<x>12.876999855041504</x>
<y>-30.47100067138672</y>
<z>61.63600158691406</z>
</parallel>
<rotation>
<x>-0.24199999868869781</x>
<y>-0.8840000033378601</y>
<z>-0.4000000059604645</z>
<x>-0.46299999952316284</x>
<y>-0.25699999928474426</y>
<z>0.8479999899864197</z>
<x>-0.8529999852180481</x>
<y>0.38999998569488525</y>
<z>-0.34700000286102295</z>
</rotation>
<rmsd>2.411406993865967</rmsd>
<dmax>4.494572162628174</dmax>
</indel>