NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1LA6B-1C7BA
confEVID 1LA6B-1C7BA
pdbIDA 1LA6
pdbIDB 1C7B
pdbChainA B
pdbChainB A
identity 0.318800002336502
indelSize 2
alignment <alignment>
<seq1>VEWTDKERSIISDIFSHMD--YDDIGPKALSRCLVVYPWTQRYFI-----MSNANVAAHGIKVLHGLDRGMKNMDNIADAYTDLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGHAFTAETQGAFQKFLAAVVSALGK---</seq1>
<seq2>-MLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq2>
<ss_1> HHHHHHHHHHGGG --HHHHHHHHHHHHHHH GGG ----- HHHHHHHHHHHHHHHHHHH GGG GGGHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHHHH ---</ss_1>
<ss_2>- HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG HHHHHHHHHHHHHHHHHHH GGGHHHH HHHHHHIIIII HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1LA6</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1LA6B</entryIDChain>
<sequence>FSHMD--YDDIG</sequence>
<secondary-structure>GGG --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1233 CA PHE B 15 23.487 13.932 -5.919 1.00 27.17 C </line>
<line>ATOM 1244 CA SER B 16 26.937 15.471 -6.318 1.00 38.31 C </line>
<line>ATOM 1250 CA HIS B 17 28.609 12.074 -5.878 1.00 43.50 C </line>
<line>ATOM 1260 CA MET B 18 26.098 10.155 -7.974 1.00 38.08 C </line>
<line>ATOM 1268 CA ASP B 19 27.015 9.120 -11.505 1.00 37.65 C </line>
<line>ATOM 1276 CA TYR B 20 23.663 9.231 -13.362 1.00 35.97 C </line>
<line>ATOM 1288 CA ASP B 21 24.934 7.066 -16.222 1.00 39.68 C </line>
<line>ATOM 1296 CA ASP B 22 25.716 4.335 -13.709 1.00 34.27 C </line>
<line>ATOM 1304 CA ILE B 23 22.798 4.624 -11.254 1.00 28.32 C </line>
<line>ATOM 1312 CA GLY B 24 19.993 5.344 -13.696 1.00 22.56 C </line>
</atom-coordinate>
<distance-map>
<line> GLY ILE ASP ASP TYR ASP MET HIS SER PHE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>PHE CA 12.10 10.75 12.56 12.47 8.81 8.17 5.03 5.45 3.80 </line>
<line>SER CA 14.33 12.62 13.42 13.14 9.96 8.20 5.63 3.81 </line>
<line>HIS CA 13.44 10.87 11.38 12.07 9.41 6.55 3.79 </line>
<line>MET CA 9.65 7.23 8.18 8.88 5.98 3.79 </line>
<line>ASP CA 8.27 6.17 5.43 5.55 3.83 </line>
<line>TYR CA 5.36 5.14 5.32 3.81 </line>
<line>ASP CA 5.81 5.93 3.79 </line>
<line>ASP CA 5.81 3.82 </line>
<line>ILE CA 3.79 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>PHE CA 360</line>
<line>SER CA 244</line>
<line>HIS CA 243</line>
<line>MET CA 324</line>
<line>ASP CA 266</line>
<line>TYR CA 301</line>
<line>ASP CA 258</line>
<line>ASP CA 288</line>
<line>ILE CA 358</line>
<line>GLY CA 377</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1C7B</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1C7BA</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 94 CA TRP A 14 34.494 23.435 33.106 1.00 24.16 C </line>
<line>ATOM 108 CA GLY A 15 37.797 25.120 32.281 1.00 26.04 C </line>
<line>ATOM 112 CA LYS A 16 39.456 21.864 33.318 1.00 26.32 C </line>
<line>ATOM 121 CA VAL A 17 37.123 19.967 30.975 1.00 22.90 C </line>
<line>ATOM 128 CA GLY A 18 38.419 22.169 28.183 1.00 37.77 C </line>
<line>ATOM 132 CA ALA A 19 38.832 20.447 24.825 1.00 31.60 C </line>
<line>ATOM 137 CA HIS A 20 37.326 17.183 26.072 1.00 21.70 C </line>
<line>ATOM 147 CA ALA A 21 33.845 18.675 26.399 1.00 25.42 C </line>
<line>ATOM 152 CA GLY A 22 32.552 17.001 23.228 1.00 18.76 C </line>
<line>ATOM 156 CA GLU A 23 33.925 13.592 24.205 1.00 14.60 C </line>
<line>ATOM 165 CA TYR A 24 32.449 13.881 27.688 1.00 11.24 C </line>
<line>ATOM 177 CA GLY A 25 29.083 14.896 26.235 1.00 10.78 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.22 11.17 13.28 11.95 8.25 9.83 9.81 6.42 4.85 5.21 3.80 </line>
<line>GLY CA 14.73 13.27 14.60 13.24 9.58 10.09 8.86 5.09 5.36 3.80 </line>
<line>LYS CA 14.36 12.02 13.49 13.16 9.46 8.89 8.63 5.25 3.81 </line>
<line>VAL CA 10.62 8.35 9.83 9.47 5.78 5.64 6.40 3.78 </line>
<line>GLY CA 11.99 10.23 10.47 9.26 6.03 5.52 3.80 </line>
<line>ALA CA 11.31 9.59 8.45 7.34 5.52 3.80 </line>
<line>HIS CA 8.56 6.11 5.29 5.56 3.80 </line>
<line>ALA CA 6.08 5.16 5.54 3.81 </line>
<line>GLY CA 5.05 5.44 3.80 </line>
<line>GLU CA 5.41 3.79 </line>
<line>TYR CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 381</line>
<line>GLY CA 252</line>
<line>LYS CA 248</line>
<line>VAL CA 319</line>
<line>GLY CA 224</line>
<line>ALA CA 194</line>
<line>HIS CA 254</line>
<line>ALA CA 320</line>
<line>GLY CA 289</line>
<line>GLU CA 311</line>
<line>TYR CA 367</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<parallel>
<x>-10.144000053405762</x>
<y>-10.055000305175781</y>
<z>-39.073001861572266</z>
</parallel>
<rotation>
<x>0.9670000076293945</x>
<y>-0.02199999988079071</y>
<z>0.2540000081062317</z>
<x>0.03700000047683716</x>
<y>0.9980000257492065</y>
<z>-0.05700000002980232</z>
<x>-0.25200000405311584</x>
<y>0.06400000303983688</y>
<z>0.9660000205039978</z>
</rotation>
<rmsd>1.550737977027893</rmsd>
<dmax>3.430677890777588</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1LA6</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1LA6B</entryIDChain>
<sequence>QRYFI-----MSNAN</sequence>
<secondary-structure>GGG ----- HH</secondary-structure>
<atom-coordinate>
<line>ATOM 1430 CA GLN B 39 8.656 -4.420 -18.548 1.00 34.33 C </line>
<line>ATOM 1439 CA ARG B 40 5.451 -3.757 -20.492 1.00 45.10 C </line>
<line>ATOM 1450 CA TYR B 41 6.185 -0.019 -20.726 1.00 49.28 C </line>
<line>ATOM 1462 CA PHE B 42 9.378 -0.775 -22.626 1.00 60.89 C </line>
<line>ATOM 1473 CA ILE B 54 17.004 -5.890 -19.862 1.00 81.87 C </line>
<line>ATOM 1481 CA MET B 55 20.481 -4.990 -18.575 1.00 74.99 C </line>
<line>ATOM 1489 CA SER B 56 21.905 -4.269 -22.046 1.00 60.44 C </line>
<line>ATOM 1495 CA ASN B 57 18.876 -2.514 -23.558 1.00 40.64 C </line>
<line>ATOM 1503 CA ALA B 58 19.887 1.045 -24.531 1.00 29.24 C </line>
<line>ATOM 1508 CA ASN B 59 16.311 2.252 -24.394 1.00 31.84 C </line>
</atom-coordinate>
<distance-map>
<line> ASN ALA ASN SER MET ILE PHE TYR ARG GLN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLN CA 11.72 13.85 11.54 13.70 11.84 8.58 5.52 5.50 3.81 </line>
<line>ARG CA 13.01 15.74 13.83 16.54 15.20 11.77 5.37 3.82 </line>
<line>TYR CA 11.01 14.26 13.24 16.34 15.29 12.34 3.79 </line>
<line>PHE CA 7.77 10.83 9.70 13.02 12.55 9.59 </line>
<line>ILE CA 9.34 8.84 5.34 5.61 3.82 </line>
<line>MET CA 10.18 8.50 5.79 3.82 </line>
<line>SER CA 8.91 6.20 3.81 </line>
<line>ASN CA 5.48 3.83 </line>
<line>ALA CA 3.78 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>GLN CA 265</line>
<line>ARG CA 213</line>
<line>TYR CA 282</line>
<line>PHE CA 253</line>
<line>ILE CA 216</line>
<line>MET CA 214</line>
<line>SER CA 165</line>
<line>ASN CA 188</line>
<line>ALA CA 170</line>
<line>ASN CA 200</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1C7B</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1C7BA</entryIDChain>
<sequence>KTYFPHFDLSHGSAQ</sequence>
<secondary-structure>GGG HH</secondary-structure>
<atom-coordinate>
<line>ATOM 293 CA LYS A 40 15.929 6.237 24.004 1.00 9.56 C </line>
<line>ATOM 302 CA THR A 41 12.314 6.966 23.041 1.00 9.03 C </line>
<line>ATOM 309 CA TYR A 42 13.466 10.464 22.063 1.00 6.67 C </line>
<line>ATOM 321 CA PHE A 43 16.100 9.147 19.618 1.00 15.64 C </line>
<line>ATOM 332 CA PRO A 44 14.493 6.461 17.438 1.00 16.29 C </line>
<line>ATOM 339 CA HIS A 45 15.966 8.247 14.407 1.00 17.17 C </line>
<line>ATOM 349 CA PHE A 46 19.529 7.739 15.658 1.00 11.92 C </line>
<line>ATOM 360 CA ASP A 47 21.971 4.889 15.392 1.00 18.14 C </line>
<line>ATOM 368 CA LEU A 48 22.601 4.511 19.131 1.00 20.64 C </line>
<line>ATOM 376 CA SER A 49 25.410 1.974 18.792 1.00 22.99 C </line>
<line>ATOM 382 CA HIS A 50 28.533 2.803 20.777 1.00 21.00 C </line>
<line>ATOM 392 CA GLY A 51 30.731 5.392 19.054 1.00 21.85 C </line>
<line>ATOM 396 CA SER A 52 28.157 6.217 16.387 1.00 14.23 C </line>
<line>ATOM 402 CA ALA A 53 28.782 9.519 14.618 1.00 16.84 C </line>
<line>ATOM 407 CA GLN A 54 25.287 10.804 15.426 1.00 9.76 C </line>
</atom-coordinate>
<distance-map>
<line> GLN ALA SER GLY HIS SER LEU ASP PHE HIS PRO PHE TYR THR LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 13.49 16.25 14.41 15.63 13.46 11.63 8.44 10.61 9.21 9.81 6.72 5.27 5.26 3.81 </line>
<line>THR CA 15.52 18.67 17.20 18.91 16.90 14.65 11.28 12.49 10.35 9.46 6.03 5.55 3.81 </line>
<line>TYR CA 13.56 17.06 16.31 18.24 16.95 15.01 11.29 12.16 9.23 8.35 6.20 3.83 </line>
<line>PHE CA 10.23 13.64 12.82 15.12 14.01 11.78 8.00 8.39 5.42 5.29 3.81 </line>
<line>PRO CA 11.81 14.88 13.71 16.35 14.89 11.88 8.51 7.91 5.49 3.81 </line>
<line>HIS CA 9.72 12.88 12.52 15.74 15.10 12.16 8.96 6.95 3.81 </line>
<line>PHE CA 6.53 9.48 8.79 11.94 11.47 8.81 5.65 3.76 </line>
<line>ASP CA 6.78 8.27 6.40 9.51 8.74 5.65 3.81 </line>
<line>LEU CA 7.78 9.15 6.43 8.18 6.39 3.80 </line>
<line>SER CA 9.45 9.26 5.60 6.33 3.79 </line>
<line>HIS CA 10.16 9.12 5.57 3.81 </line>
<line>GLY CA 8.49 6.36 3.80 </line>
<line>SER CA 5.50 3.80 </line>
<line>ALA CA 3.81 </line>
<line>GLN CA </line>
</distance-map>
<n14>
<line>LYS CA 278</line>
<line>THR CA 227</line>
<line>TYR CA 286</line>
<line>PHE CA 274</line>
<line>PRO CA 179</line>
<line>HIS CA 159</line>
<line>PHE CA 208</line>
<line>ASP CA 187</line>
<line>LEU CA 247</line>
<line>SER CA 203</line>
<line>HIS CA 208</line>
<line>GLY CA 200</line>
<line>SER CA 201</line>
<line>ALA CA 192</line>
<line>GLN CA 224</line>
</n14>
</entryChain>
<parallel>
<x>-6.4730000495910645</x>
<y>-10.039999961853027</y>
<z>-41.10200119018555</z>
</parallel>
<rotation>
<x>0.972000002861023</x>
<y>0.2199999988079071</y>
<z>0.07999999821186066</z>
<x>-0.1770000010728836</x>
<y>0.9150000214576721</y>
<z>-0.3630000054836273</z>
<x>-0.15399999916553497</x>
<y>0.33899998664855957</y>
<z>0.9279999732971191</z>
</rotation>
<rmsd>3.853848934173584</rmsd>
<dmax>9.235516548156738</dmax>
</indel>