NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1M39A-2CTNA
confEVID 1M39A-2CTNA
pdbIDA 1M39
pdbIDB 2CTN
pdbChainA A
pdbChainB A
identity 0.372099995613098
indelSize 1
alignment <alignment>
<seq1>---FGDF-----LTVMTQKMSEKDTKEEILKAFKLFDDD-ETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI---------</seq1>
<seq2>ADIYKAAVEQLTEEQKN----------EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS</seq2>
<ss_1>--- HH-----HHHHH HHHHHHHHH - EEEEEHHHHHHHHHH HHHHHHHHHHH EEEEEHHHH ---------</ss_1>
<ss_2> HHHHHGGG HHHHH----------HHHHHHHHHH HHHHHHHH HHHHHHHHH HHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1M39</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1M39A</entryIDChain>
<sequence>LFDDD-ETGKI</sequence>
<secondary-structure>HH - EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 435 CA LEU A 112 -1.518 1.592 -10.235 1.00 0.00 C </line>
<line>ATOM 454 CA PHE A 113 0.090 -1.250 -7.962 1.00 0.00 C </line>
<line>ATOM 474 CA ASP A 114 -2.474 -4.050 -8.994 1.00 0.00 C </line>
<line>ATOM 486 CA ASP A 115 -1.569 -4.342 -12.896 1.00 0.00 C </line>
<line>ATOM 498 CA ASP A 116 -4.138 -7.368 -13.167 1.00 0.00 C </line>
<line>ATOM 510 CA GLU A 117 -7.187 -4.972 -12.130 1.00 0.00 C </line>
<line>ATOM 525 CA THR A 118 -8.488 -7.463 -9.388 1.00 0.00 C </line>
<line>ATOM 539 CA GLY A 119 -7.457 -5.193 -6.408 1.00 0.00 C </line>
<line>ATOM 546 CA LYS A 120 -5.295 -7.271 -3.994 1.00 0.00 C </line>
<line>ATOM 568 CA ILE A 121 -1.580 -6.263 -3.112 1.00 0.00 C </line>
</atom-coordinate>
<distance-map>
<line> ILE LYS GLY THR GLU ASP ASP ASP PHE LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 10.60 11.48 9.80 11.46 8.88 9.78 6.50 5.86 3.98 </line>
<line>PHE CA 7.17 9.00 8.66 10.69 9.17 9.08 6.05 3.93 </line>
<line>ASP CA 6.35 6.58 5.73 6.93 5.74 5.58 4.02 </line>
<line>ASP CA 9.97 10.09 8.80 8.36 5.70 3.98 </line>
<line>ASP CA 10.43 9.25 7.84 5.76 4.01 </line>
<line>GLU CA 10.70 8.66 5.73 3.93 </line>
<line>THR CA 9.41 6.27 3.89 </line>
<line>GLY CA 6.82 3.85 </line>
<line>LYS CA 3.95 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>LEU CA 528</line>
<line>PHE CA 636</line>
<line>ASP CA 522</line>
<line>ASP CA 353</line>
<line>ASP CA 284</line>
<line>GLU CA 317</line>
<line>THR CA 340</line>
<line>GLY CA 493</line>
<line>LYS CA 569</line>
<line>ILE CA 711</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2CTN</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2CTNA</entryIDChain>
<sequence>IFVLGAEDGSI</sequence>
<secondary-structure>HHH </secondary-structure>
<atom-coordinate>
<line>ATOM 378 CA ILE A 26 61.411 -8.917 -7.203 1.00 0.63 C </line>
<line>ATOM 397 CA PHE A 27 62.093 -8.955 -3.442 1.00 0.79 C </line>
<line>ATOM 417 CA VAL A 28 58.870 -7.083 -2.600 1.00 0.65 C </line>
<line>ATOM 433 CA LEU A 29 56.870 -10.105 -3.836 1.00 0.99 C </line>
<line>ATOM 452 CA GLY A 30 54.708 -10.719 -0.744 1.00 1.58 C </line>
<line>ATOM 459 CA ALA A 31 57.073 -8.423 1.198 1.00 0.95 C </line>
<line>ATOM 469 CA GLU A 32 55.783 -7.146 4.565 1.00 1.90 C </line>
<line>ATOM 484 CA ASP A 33 54.186 -4.106 2.880 1.00 2.11 C </line>
<line>ATOM 496 CA GLY A 34 54.989 -3.690 -0.839 1.00 1.40 C </line>
<line>ATOM 503 CA SER A 35 58.518 -2.823 0.348 1.00 0.70 C </line>
<line>ATOM 514 CA ILE A 36 61.736 -4.292 1.804 1.00 0.78 C </line>
</atom-coordinate>
<distance-map>
<line> ILE SER GLY ASP GLU ALA GLY LEU VAL PHE ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 10.13 10.13 10.44 13.30 13.16 9.47 9.48 5.78 5.57 3.82 </line>
<line>PHE CA 7.03 8.05 9.22 11.23 10.35 6.86 8.06 5.36 3.82 </line>
<line>VAL CA 5.95 5.19 5.45 7.80 7.80 4.41 5.83 3.83 </line>
<line>LEU CA 9.45 8.56 7.33 9.40 8.97 5.31 3.82 </line>
<line>GLY CA 9.86 8.83 7.04 7.56 6.49 3.83 </line>
<line>ALA CA 6.26 5.85 5.56 5.46 3.83 </line>
<line>GLU CA 7.16 6.63 6.46 3.83 </line>
<line>ASP CA 7.63 5.18 3.83 </line>
<line>GLY CA 7.27 3.82 </line>
<line>SER CA 3.83 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ILE CA 435</line>
<line>PHE CA 528</line>
<line>VAL CA 496</line>
<line>LEU CA 339</line>
<line>GLY CA 281</line>
<line>ALA CA 417</line>
<line>GLU CA 376</line>
<line>ASP CA 358</line>
<line>GLY CA 393</line>
<line>SER CA 579</line>
<line>ILE CA 704</line>
</n14>
</entryChain>
<parallel>
<x>-61.45600128173828</x>
<y>3.4590001106262207</y>
<z>-8.744999885559082</z>
</parallel>
<rotation>
<x>-0.024000000208616257</x>
<y>1.0</y>
<z>0.008999999612569809</z>
<x>-0.44600000977516174</x>
<y>-0.01899999938905239</y>
<z>0.8949999809265137</z>
<x>-0.8949999809265137</x>
<y>-0.017000000923871994</y>
<z>-0.44600000977516174</z>
</rotation>
<rmsd>2.3949410915374756</rmsd>
<dmax>3.7962729930877686</dmax>
</indel>