NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1MRUA-1IA8A
confEVID 1MRUA-1IA8A
pdbIDA 1MRU
pdbIDB 1IA8
pdbChainA A
pdbChainB A
identity 0.245600000023842
indelSize 3
alignment <alignment>
<seq1>TPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI--------------TAQYLSPEQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK--</seq1>
<seq2>-AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRC-----PENIKKEICINKMLNHENVVKFY--GHRRE--GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKK---IDSAPLALLHKILVENPSARI-TIPDIKKD--RWYNKPLKKGAKRP</seq2>
<ss_1> EEE EEEEEEEEE EEEEEEEEEEE HHHHHHHHHHHHH EEEEEEE EEEEEEEEEEEEEEEEHHHHHH HHHHHHHHHHHHHHHHHH EEE EEEEE EEEEE -------------- -HHHHHHHHHHHHHHHHH -- HHHHHH HHHHHHHHHH HHHH HHHHHHHHHHHH --</ss_1>
<ss_2>- EEE EEE EEEEEEE EEEEEEEEE ----- HHHHHHHHGGG --EEEEE--EEEEEEEE GGGG HHHHHHHHHHHHHHHHHHH EEEEE EEEE EEEEE HHHHHHHHHHHHHHHHH HHHHHHH --- HHHH HHHH HHHH - HHHGGG --HHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1MRU</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1MRUA</entryIDChain>
<sequence>EPPFT--GDSPV</sequence>
<secondary-structure> -- </secondary-structure>
<atom-coordinate>
<line>ATOM 1503 CA GLU A 213 12.981 25.642 -5.927 1.00 59.80 C </line>
<line>ATOM 1512 CA PRO A 214 12.823 21.943 -4.935 1.00 58.64 C </line>
<line>ATOM 1519 CA PRO A 215 15.004 19.444 -6.785 1.00 58.48 C </line>
<line>ATOM 1526 CA PHE A 216 11.787 18.236 -8.430 1.00 58.29 C </line>
<line>ATOM 1537 CA THR A 217 8.616 20.040 -9.488 1.00 57.27 C </line>
<line>ATOM 1544 CA GLY A 218 5.569 18.219 -10.742 1.00 57.81 C </line>
<line>ATOM 1548 CA ASP A 219 2.091 19.179 -11.828 1.00 60.68 C </line>
<line>ATOM 1556 CA SER A 220 0.672 16.303 -9.750 1.00 59.53 C </line>
<line>ATOM 1562 CA PRO A 221 1.998 14.562 -6.602 1.00 57.33 C </line>
<line>ATOM 1569 CA VAL A 222 2.784 11.241 -8.308 1.00 52.85 C </line>
</atom-coordinate>
<distance-map>
<line> VAL PRO SER ASP GLY THR PHE PRO PRO GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 17.81 15.62 15.92 13.97 11.54 7.94 7.91 6.58 3.83 </line>
<line>PRO CA 15.06 13.21 14.24 13.05 10.01 6.48 5.20 3.80 </line>
<line>PRO CA 14.80 13.89 14.97 13.87 10.30 6.96 3.81 </line>
<line>PHE CA 11.40 10.61 11.36 10.32 6.63 3.80 </line>
<line>THR CA 10.62 9.06 8.78 6.99 3.76 </line>
<line>GLY CA 7.90 6.58 5.35 3.77 </line>
<line>ASP CA 8.71 6.97 3.82 </line>
<line>SER CA 5.67 3.83 </line>
<line>PRO CA 3.82 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>GLU CA 360</line>
<line>PRO CA 440</line>
<line>PRO CA 427</line>
<line>PHE CA 377</line>
<line>THR CA 275</line>
<line>GLY CA 214</line>
<line>ASP CA 137</line>
<line>SER CA 133</line>
<line>PRO CA 198</line>
<line>VAL CA 200</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1IA8</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1IA8A</entryIDChain>
<sequence>ELPWDQPSDSCQ</sequence>
<secondary-structure> H</secondary-structure>
<atom-coordinate>
<line>ATOM 1596 CA GLU A 205 29.806 -3.302 28.688 1.00 20.39 C </line>
<line>ATOM 1605 CA LEU A 206 26.562 -4.013 30.505 1.00 20.37 C </line>
<line>ATOM 1613 CA PRO A 207 26.760 -3.646 34.323 1.00 21.75 C </line>
<line>ATOM 1620 CA TRP A 208 24.759 -6.768 35.227 1.00 19.87 C </line>
<line>ATOM 1634 CA ASP A 209 22.901 -9.800 33.865 1.00 23.07 C </line>
<line>ATOM 1642 CA GLN A 210 19.775 -8.522 35.635 1.00 21.65 C </line>
<line>ATOM 1651 CA PRO A 211 18.815 -6.108 38.451 1.00 23.88 C </line>
<line>ATOM 1658 CA SER A 212 18.303 -8.678 41.214 1.00 30.46 C </line>
<line>ATOM 1664 CA ASP A 213 19.706 -8.912 44.741 1.00 39.23 C </line>
<line>ATOM 1672 CA SER A 214 21.047 -12.329 43.721 1.00 36.16 C </line>
<line>ATOM 1678 CA CYS A 215 23.159 -10.632 41.045 1.00 31.71 C </line>
<line>ATOM 1684 CA GLN A 216 26.497 -9.687 42.602 1.00 27.76 C </line>
</atom-coordinate>
<distance-map>
<line> GLN CYS SER ASP SER PRO GLN ASP TRP PRO LEU GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 15.66 15.83 19.60 19.78 17.84 14.97 13.27 10.80 8.96 6.41 3.79 </line>
<line>LEU CA 13.36 12.90 16.56 16.54 14.31 11.29 9.63 7.63 5.76 3.84 </line>
<line>PRO CA 10.25 10.34 14.01 13.64 12.01 9.29 8.62 7.28 3.82 </line>
<line>TRP CA 8.12 7.17 10.81 10.98 9.01 6.79 5.30 3.81 </line>
<line>ASP CA 9.45 7.23 10.34 11.37 8.74 7.17 3.81 </line>
<line>GLN CA 9.75 6.72 9.03 9.11 5.77 3.83 </line>
<line>PRO CA 9.44 6.79 8.45 6.94 3.81 </line>
<line>SER CA 8.37 5.24 5.21 3.80 </line>
<line>ASP CA 7.16 5.34 3.81 </line>
<line>SER CA 6.16 3.81 </line>
<line>CYS CA 3.80 </line>
<line>GLN CA </line>
</distance-map>
<n14>
<line>GLU CA 340</line>
<line>LEU CA 421</line>
<line>PRO CA 457</line>
<line>TRP CA 369</line>
<line>ASP CA 291</line>
<line>GLN CA 345</line>
<line>PRO CA 387</line>
<line>SER CA 284</line>
<line>ASP CA 243</line>
<line>SER CA 179</line>
<line>CYS CA 239</line>
<line>GLN CA 227</line>
</n14>
</entryChain>
<parallel>
<x>-15.038000106811523</x>
<y>27.05699920654297</y>
<z>-45.020999908447266</z>
</parallel>
<rotation>
<x>0.16200000047683716</x>
<y>-0.05900000035762787</y>
<z>0.9850000143051147</z>
<x>0.8190000057220459</x>
<y>-0.5479999780654907</y>
<z>-0.1679999977350235</z>
<x>-0.550000011920929</x>
<y>-0.8339999914169312</y>
<z>0.03999999910593033</z>
</rotation>
<rmsd>3.4975109100341797</rmsd>
<dmax>5.147671222686768</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1IA8</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1IA8A</entryIDChain>
<sequence>GHRRE--GNIQY</sequence>
<secondary-structure>EEEEE--EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 523 CA GLY A 72 2.163 2.149 5.801 1.00 33.61 C </line>
<line>ATOM 527 CA HIS A 73 1.463 -1.564 5.413 1.00 40.55 C </line>
<line>ATOM 537 CA ARG A 74 0.176 -4.056 2.837 1.00 50.38 C </line>
<line>ATOM 548 CA ARG A 75 -2.138 -7.002 3.550 1.00 61.66 C </line>
<line>ATOM 559 CA GLU A 76 -1.109 -9.565 0.920 1.00 62.56 C </line>
<line>ATOM 568 CA GLY A 77 -2.978 -12.551 2.343 1.00 60.86 C </line>
<line>ATOM 572 CA ASN A 78 -1.174 -13.732 5.477 1.00 59.24 C </line>
<line>ATOM 580 CA ILE A 79 2.136 -11.947 4.889 1.00 54.66 C </line>
<line>ATOM 588 CA GLN A 80 2.191 -8.455 6.408 1.00 48.22 C </line>
<line>ATOM 597 CA TYR A 81 4.436 -5.829 4.805 1.00 43.61 C </line>
</atom-coordinate>
<distance-map>
<line> TYR GLN ILE ASN GLY GLU ARG ARG HIS GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 8.36 10.62 14.13 16.23 15.95 13.11 10.36 7.16 3.80 </line>
<line>HIS CA 5.23 7.00 10.42 12.45 12.24 9.53 6.78 3.81 </line>
<line>ARG CA 5.02 6.01 8.39 10.12 9.08 5.97 3.81 </line>
<line>ARG CA 6.79 5.39 6.67 7.07 5.74 3.81 </line>
<line>GLU CA 7.73 6.50 5.65 6.18 3.80 </line>
<line>GLY CA 10.31 7.75 5.74 3.80 </line>
<line>ASN CA 9.71 6.33 3.81 </line>
<line>ILE CA 6.54 3.81 </line>
<line>GLN CA 3.81 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>GLY CA 310</line>
<line>HIS CA 329</line>
<line>ARG CA 276</line>
<line>ARG CA 218</line>
<line>GLU CA 184</line>
<line>GLY CA 156</line>
<line>ASN CA 188</line>
<line>ILE CA 246</line>
<line>GLN CA 312</line>
<line>TYR CA 365</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1MRU</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1MRUA</entryIDChain>
<sequence>GEAETPAGPLPY</sequence>
<secondary-structure>EEEEE EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 599 CA GLY A 78 -4.445 20.810 28.119 1.00 56.11 C </line>
<line>ATOM 603 CA GLU A 79 -7.862 21.621 26.746 1.00 61.02 C </line>
<line>ATOM 612 CA ALA A 80 -10.502 24.186 27.596 1.00 66.19 C </line>
<line>ATOM 617 CA GLU A 81 -14.189 23.330 27.706 1.00 73.07 C </line>
<line>ATOM 626 CA THR A 82 -16.480 24.781 24.995 1.00 74.55 C </line>
<line>ATOM 633 CA PRO A 83 -20.023 24.099 23.667 1.00 75.31 C </line>
<line>ATOM 640 CA ALA A 84 -19.007 21.400 21.124 1.00 74.44 C </line>
<line>ATOM 645 CA GLY A 85 -16.667 19.802 23.654 1.00 71.12 C </line>
<line>ATOM 649 CA PRO A 86 -12.941 19.648 24.448 1.00 67.21 C </line>
<line>ATOM 656 CA LEU A 87 -10.407 21.937 22.732 1.00 61.46 C </line>
<line>ATOM 664 CA PRO A 88 -6.867 20.465 23.038 1.00 55.94 C </line>
<line>ATOM 671 CA TYR A 89 -4.251 23.183 23.036 1.00 51.83 C </line>
</atom-coordinate>
<distance-map>
<line> TYR PRO LEU PRO GLY ALA PRO THR GLU ALA GLU GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 5.61 5.64 8.11 9.33 13.05 16.17 16.53 13.05 10.07 6.95 3.77 </line>
<line>GLU CA 5.41 4.01 4.76 5.91 9.51 12.48 12.79 9.34 6.62 3.78 </line>
<line>ALA CA 7.80 6.92 5.36 6.04 8.53 11.04 10.30 6.55 3.79 </line>
<line>GLU CA 10.98 9.14 6.40 5.07 5.92 8.38 7.14 3.83 </line>
<line>THR CA 12.49 10.72 7.08 6.26 5.16 5.73 3.84 </line>
<line>PRO CA 15.81 13.66 9.90 8.40 5.45 3.84 </line>
<line>ALA CA 14.99 12.33 8.77 7.14 3.80 </line>
<line>GLY CA 12.88 9.84 6.68 3.81 </line>
<line>PRO CA 9.49 6.29 3.82 </line>
<line>LEU CA 6.29 3.85 </line>
<line>PRO CA 3.77 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>GLY CA 327</line>
<line>GLU CA 346</line>
<line>ALA CA 290</line>
<line>GLU CA 211</line>
<line>THR CA 193</line>
<line>PRO CA 123</line>
<line>ALA CA 153</line>
<line>GLY CA 191</line>
<line>PRO CA 260</line>
<line>LEU CA 352</line>
<line>PRO CA 406</line>
<line>TYR CA 456</line>
</n14>
</entryChain>
<parallel>
<x>11.503999710083008</x>
<y>-29.29800033569336</y>
<z>-21.84600067138672</z>
</parallel>
<rotation>
<x>0.6259999871253967</x>
<y>0.6869999766349792</y>
<z>0.36899998784065247</z>
<x>0.3330000042915344</x>
<y>0.19200000166893005</y>
<z>-0.9229999780654907</z>
<x>-0.7049999833106995</x>
<y>0.7009999752044678</y>
<z>-0.10899999737739563</z>
</rotation>
<rmsd>2.751404047012329</rmsd>
<dmax>4.2428297996521</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1IA8</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1IA8A</entryIDChain>
<sequence>NPWKK---IDSAP</sequence>
<secondary-structure> --- HH</secondary-structure>
<atom-coordinate>
<line>ATOM 1805 CA ASN A 229 35.041 -2.348 36.235 1.00 42.82 C </line>
<line>ATOM 1813 CA PRO A 230 32.103 -0.675 34.490 1.00 30.88 C </line>
<line>ATOM 1820 CA TRP A 231 31.757 2.462 36.635 1.00 21.32 C </line>
<line>ATOM 1834 CA LYS A 232 35.487 3.199 36.992 1.00 25.79 C </line>
<line>ATOM 1843 CA LYS A 233 35.638 3.852 33.228 1.00 21.58 C </line>
<line>ATOM 1852 CA ILE A 234 32.933 6.504 33.062 1.00 23.85 C </line>
<line>ATOM 1860 CA ASP A 235 33.136 10.025 34.646 1.00 24.80 C </line>
<line>ATOM 1868 CA SER A 236 32.144 11.667 37.793 1.00 23.58 C </line>
<line>ATOM 1874 CA ALA A 237 29.816 13.944 35.639 1.00 19.05 C </line>
<line>ATOM 1879 CA PRO A 238 27.999 11.252 33.646 1.00 16.82 C </line>
</atom-coordinate>
<distance-map>
<line> PRO ALA SER ASP ILE LYS LYS TRP PRO ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 15.53 17.12 14.40 12.62 9.64 6.92 5.62 5.84 3.80 </line>
<line>PRO CA 12.64 14.84 12.78 10.75 7.37 5.88 5.72 3.82 </line>
<line>TRP CA 10.02 11.69 9.29 7.94 5.52 5.35 3.82 </line>
<line>LYS CA 11.49 12.22 9.14 7.59 5.74 3.82 </line>
<line>LYS CA 10.64 11.90 9.70 6.81 3.79 </line>
<line>ILE CA 6.87 8.47 7.05 3.87 </line>
<line>ASP CA 5.38 5.23 3.69 </line>
<line>SER CA 5.88 3.90 </line>
<line>ALA CA 3.81 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>ASN CA 263</line>
<line>PRO CA 359</line>
<line>TRP CA 374</line>
<line>LYS CA 267</line>
<line>LYS CA 289</line>
<line>ILE CA 367</line>
<line>ASP CA 315</line>
<line>SER CA 249</line>
<line>ALA CA 297</line>
<line>PRO CA 405</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1MRU</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1MRUA</entryIDChain>
<sequence>PPSARHEGLSADL</sequence>
<secondary-structure> HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1675 CA PRO A 235 23.099 20.110 -9.971 1.00 55.70 C </line>
<line>ATOM 1682 CA PRO A 236 22.555 23.346 -7.953 1.00 57.68 C </line>
<line>ATOM 1689 CA SER A 237 25.098 25.216 -10.085 1.00 62.58 C </line>
<line>ATOM 1695 CA ALA A 238 23.215 24.316 -13.282 1.00 67.16 C </line>
<line>ATOM 1700 CA ARG A 239 20.016 25.533 -11.594 1.00 70.81 C </line>
<line>ATOM 1711 CA HIS A 240 21.239 28.818 -10.111 1.00 71.64 C </line>
<line>ATOM 1721 CA GLU A 241 24.046 31.363 -10.309 1.00 75.58 C </line>
<line>ATOM 1730 CA GLY A 242 26.661 31.734 -7.546 1.00 73.25 C </line>
<line>ATOM 1734 CA LEU A 243 26.845 28.090 -6.655 1.00 70.30 C </line>
<line>ATOM 1742 CA SER A 244 30.059 26.426 -5.598 1.00 68.91 C </line>
<line>ATOM 1748 CA ALA A 245 30.312 23.023 -7.334 1.00 66.17 C </line>
<line>ATOM 1753 CA ASP A 246 31.659 22.130 -3.876 1.00 62.62 C </line>
<line>ATOM 1761 CA LEU A 247 28.215 22.909 -2.564 1.00 58.73 C </line>
</atom-coordinate>
<distance-map>
<line> LEU ASP ALA SER LEU GLY GLU HIS ARG ALA SER PRO PRO </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>PRO CA 9.43 10.70 8.21 10.37 9.42 12.40 11.30 8.91 6.45 5.35 5.48 3.85 </line>
<line>PRO CA 7.83 10.05 7.79 8.45 6.53 9.35 8.49 6.03 4.95 5.46 3.81 </line>
<line>SER CA 8.46 9.55 6.29 6.80 4.80 7.17 6.24 5.28 5.31 3.82 </line>
<line>ALA CA 11.91 12.83 9.35 10.50 8.45 9.99 7.69 5.85 3.82 </line>
<line>ARG CA 12.48 14.38 11.42 11.73 8.81 9.95 7.20 3.81 </line>
<line>HIS CA 11.85 13.86 11.12 10.19 6.63 6.67 3.79 </line>
<line>GLU CA 12.20 13.59 10.85 9.10 5.65 3.82 </line>
<line>GLY CA 10.25 11.43 9.45 6.60 3.76 </line>
<line>LEU CA 6.74 8.15 6.18 3.77 </line>
<line>SER CA 5.00 4.90 3.83 </line>
<line>ALA CA 5.21 3.82 </line>
<line>ASP CA 3.77 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>PRO CA 324</line>
<line>PRO CA 349</line>
<line>SER CA 261</line>
<line>ALA CA 214</line>
<line>ARG CA 256</line>
<line>HIS CA 250</line>
<line>GLU CA 197</line>
<line>GLY CA 213</line>
<line>LEU CA 285</line>
<line>SER CA 296</line>
<line>ALA CA 275</line>
<line>ASP CA 310</line>
<line>LEU CA 432</line>
</n14>
</entryChain>
<parallel>
<x>8.380000114440918</x>
<y>-20.172000885009766</y>
<z>44.444000244140625</z>
</parallel>
<rotation>
<x>-0.03200000151991844</x>
<y>0.8610000014305115</y>
<z>0.5070000290870667</z>
<x>0.42899999022483826</x>
<y>0.4699999988079071</y>
<z>-0.7710000276565552</z>
<x>-0.902999997138977</x>
<y>0.19300000369548798</y>
<z>-0.3840000033378601</z>
</rotation>
<rmsd>3.1401989459991455</rmsd>
<dmax>4.107440948486328</dmax>
</indel>