NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1N32G-1IQVA
confEVID 1N32G-1IQVA
pdbIDA 1N32
pdbIDB 1IQV
pdbChainA G
pdbChainB A
identity 0.306699991226196
indelSize 3
alignment <alignment>
<seq1>---ARRRRAEVRQLQPDLVYGD-------VLVTAFINKIM---RDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPER---RAAVRIAHELMDAAEG--KGGAVKKKEDVERMAEANRAYAHYRW</seq1>
<seq2>IKVMGRWSTEDVEVKDPSLKPYINLEPRVHIVERLINKVMRSGGSSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR-------</seq2>
<ss_1>--- -------HHHHHHHHHH --- HHHHHHHHHHHHHHHHH HHHHHHHHHHHH EEEEEEE EEE HHHHHHHHHHHHHHHH --- HHHHHHHHHHHHH -- HHHHHHHHHH GGG </ss_1>
<ss_2> HHHH HHHHHHHHHH HHHHHHHHHHHHHHHHHHH HHHHHHHHHHHH EEEEEEE EEEEE HHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHH HHHHHHHHHHHHHHH -------</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1N32</pdbID>
<pdbChain>G</pdbChain>
<entryIDChain>1N32G</entryIDChain>
<sequence>INKIM---RDGKK</sequence>
<secondary-structure>HHHH --- H</secondary-structure>
<atom-coordinate>
<line>ATOM 40323 CA ILE G 27 240.005 142.354 -23.812 1.00 54.70 C </line>
<line>ATOM 40331 CA ASN G 28 237.007 141.014 -21.933 1.00 54.33 C </line>
<line>ATOM 40339 CA LYS G 29 237.112 137.678 -23.758 1.00 58.39 C </line>
<line>ATOM 40348 CA ILE G 30 240.754 137.387 -22.658 1.00 43.50 C </line>
<line>ATOM 40356 CA MET G 31 239.965 138.271 -19.058 1.00 57.31 C </line>
<line>ATOM 40364 CA ARG G 32 239.185 135.326 -16.789 1.00 42.99 C </line>
<line>ATOM 40375 CA ASP G 33 238.294 135.331 -13.088 1.00 49.89 C </line>
<line>ATOM 40383 CA GLY G 34 237.670 139.046 -13.555 1.00 63.79 C </line>
<line>ATOM 40387 CA LYS G 35 241.301 140.153 -13.725 1.00 72.22 C </line>
<line>ATOM 40396 CA LYS G 36 240.949 143.020 -16.181 1.00 68.40 C </line>
</atom-coordinate>
<distance-map>
<line> LYS LYS GLY ASP ARG MET ILE LYS ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 7.72 10.41 11.03 12.93 9.97 6.27 5.15 5.50 3.78 </line>
<line>ASN CA 7.26 9.30 8.63 10.59 7.97 4.95 5.27 3.80 </line>
<line>LYS CA 10.03 11.15 10.31 10.99 7.64 5.53 3.82 </line>
<line>ILE CA 8.59 9.37 9.75 10.09 6.42 3.79 </line>
<line>MET CA 5.64 5.81 6.01 6.86 3.80 </line>
<line>ARG CA 7.92 6.10 5.16 3.81 </line>
<line>ASP CA 8.70 5.72 3.80 </line>
<line>GLY CA 5.78 3.80 </line>
<line>LYS CA 3.79 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ILE CA 427</line>
<line>ASN CA 344</line>
<line>LYS CA 358</line>
<line>ILE CA 375</line>
<line>MET CA 275</line>
<line>ARG CA 198</line>
<line>ASP CA 115</line>
<line>GLY CA 142</line>
<line>LYS CA 157</line>
<line>LYS CA 229</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1IQV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1IQVA</entryIDChain>
<sequence>INKVMRSGGSSKK</sequence>
<secondary-structure>HHHHH H</secondary-structure>
<atom-coordinate>
<line>ATOM 293 CA ILE A 71 40.019 9.985 12.036 1.00 26.37 C </line>
<line>ATOM 301 CA ASN A 72 41.450 13.516 12.038 1.00 30.73 C </line>
<line>ATOM 309 CA LYS A 73 37.947 15.006 12.214 1.00 29.15 C </line>
<line>ATOM 318 CA VAL A 74 36.944 12.653 15.026 1.00 31.78 C </line>
<line>ATOM 325 CA MET A 75 40.216 13.446 16.795 1.00 45.06 C </line>
<line>ATOM 333 CA ARG A 76 39.249 17.137 16.801 1.00 57.82 C </line>
<line>ATOM 344 CA SER A 77 35.701 16.580 18.086 1.00 67.21 C </line>
<line>ATOM 350 CA GLY A 78 35.524 14.805 21.436 1.00 76.54 C </line>
<line>ATOM 354 CA GLY A 79 34.322 11.649 23.156 1.00 82.47 C </line>
<line>ATOM 358 CA SER A 80 36.412 11.953 26.318 1.00 86.01 C </line>
<line>ATOM 364 CA SER A 98 47.379 9.443 22.569 1.00 56.84 C </line>
<line>ATOM 370 CA LYS A 99 44.507 11.353 20.963 1.00 53.91 C </line>
<line>ATOM 379 CA LYS A 100 45.223 9.731 17.594 1.00 50.29 C </line>
</atom-coordinate>
<distance-map>
<line> LYS LYS SER SER GLY GLY SER ARG MET VAL LYS ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 7.62 10.08 12.86 14.86 12.60 11.48 9.94 8.63 5.89 5.05 5.43 3.81 </line>
<line>ASN CA 7.71 9.68 12.75 15.22 13.34 11.18 8.89 6.38 4.91 5.48 3.81 </line>
<line>LYS CA 10.47 11.53 15.07 14.51 12.01 9.54 6.48 5.22 5.34 3.80 </line>
<line>VAL CA 9.15 9.70 13.27 11.33 8.60 6.91 5.13 5.35 3.80 </line>
<line>MET CA 6.29 6.34 10.03 10.36 8.86 6.74 5.65 3.82 </line>
<line>ARG CA 9.55 8.86 12.59 11.20 9.74 6.39 3.81 </line>
<line>SER CA 11.74 10.64 14.40 9.47 7.21 3.80 </line>
<line>GLY CA 11.60 9.64 13.06 5.72 3.79 </line>
<line>GLY CA 12.39 10.42 13.26 3.80 </line>
<line>SER CA 12.60 9.72 11.86 </line>
<line>SER CA 5.43 3.80 </line>
<line>LYS CA 3.81 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ILE CA 397</line>
<line>ASN CA 315</line>
<line>LYS CA 368</line>
<line>VAL CA 404</line>
<line>MET CA 296</line>
<line>ARG CA 258</line>
<line>SER CA 303</line>
<line>GLY CA 279</line>
<line>GLY CA 278</line>
<line>SER CA 184</line>
<line>SER CA 126</line>
<line>LYS CA 172</line>
<line>LYS CA 204</line>
</n14>
</entryChain>
<parallel>
<x>199.41299438476562</x>
<y>126.09400177001953</y>
<z>-36.849998474121094</z>
</parallel>
<rotation>
<x>-0.5149999856948853</x>
<y>0.7879999876022339</y>
<z>0.3370000123977661</z>
<x>-0.8519999980926514</x>
<y>-0.42800000309944153</y>
<z>-0.3019999861717224</z>
<x>-0.09399999678134918</x>
<y>-0.4429999887943268</y>
<z>0.8920000195503235</z>
</rotation>
<rmsd>3.019257068634033</rmsd>
<dmax>5.212460994720459</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1N32</pdbID>
<pdbChain>G</pdbChain>
<entryIDChain>1N32G</entryIDChain>
<sequence>QRPER---RAAVR</sequence>
<secondary-structure> --- HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 40993 CA GLN G 110 245.548 126.625 -28.056 1.00 64.11 C </line>
<line>ATOM 41002 CA ARG G 111 248.873 127.861 -29.407 1.00 67.54 C </line>
<line>ATOM 41013 CA PRO G 112 252.276 126.508 -28.259 1.00 59.55 C </line>
<line>ATOM 41020 CA GLU G 113 254.116 129.736 -27.439 1.00 47.89 C </line>
<line>ATOM 41029 CA ARG G 114 254.423 129.867 -23.639 1.00 54.37 C </line>
<line>ATOM 41040 CA ARG G 115 253.714 133.582 -23.100 1.00 59.40 C </line>
<line>ATOM 41051 CA ALA G 116 250.128 134.783 -23.200 1.00 58.58 C </line>
<line>ATOM 41056 CA ALA G 117 250.622 137.995 -25.223 1.00 57.38 C </line>
<line>ATOM 41061 CA VAL G 118 252.746 136.166 -27.792 1.00 62.89 C </line>
<line>ATOM 41068 CA ARG G 119 249.971 133.639 -28.384 1.00 54.43 C </line>
</atom-coordinate>
<distance-map>
<line> ARG VAL ALA ALA ARG ARG GLU PRO ARG GLN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLN CA 8.30 11.95 12.77 10.54 11.82 10.43 9.14 6.73 3.80 </line>
<line>ARG CA 5.97 9.30 11.10 9.38 9.80 8.25 5.91 3.84 </line>
<line>PRO CA 7.50 9.68 12.00 9.93 8.87 6.10 3.80 </line>
<line>GLU CA 5.77 6.58 9.24 7.70 5.81 3.81 </line>
<line>ARG CA 7.52 7.73 9.11 6.54 3.82 </line>
<line>ARG CA 6.48 5.44 5.79 3.78 </line>
<line>ALA CA 5.31 5.46 3.83 </line>
<line>ALA CA 5.42 3.80 </line>
<line>VAL CA 3.80 </line>
<line>ARG CA </line>
</distance-map>
<n14>
<line>GLN CA 243</line>
<line>ARG CA 245</line>
<line>PRO CA 166</line>
<line>GLU CA 189</line>
<line>ARG CA 160</line>
<line>ARG CA 233</line>
<line>ALA CA 323</line>
<line>ALA CA 373</line>
<line>VAL CA 325</line>
<line>ARG CA 340</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1IQV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1IQVA</entryIDChain>
<sequence>AKCYRTKMSFAEA</sequence>
<secondary-structure>HHHHH HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 961 CA ALA A 174 26.850 15.905 19.434 1.00 28.71 C </line>
<line>ATOM 966 CA LYS A 175 24.619 12.818 19.591 1.00 29.45 C </line>
<line>ATOM 975 CA CYS A 176 27.169 11.053 21.792 1.00 29.61 C </line>
<line>ATOM 981 CA TYR A 177 27.449 13.885 24.312 1.00 31.59 C </line>
<line>ATOM 993 CA ARG A 178 23.673 14.035 24.744 1.00 30.51 C </line>
<line>ATOM 1004 CA THR A 179 22.491 10.412 24.427 1.00 26.97 C </line>
<line>ATOM 1011 CA LYS A 180 23.325 6.952 25.752 1.00 24.29 C </line>
<line>ATOM 1020 CA MET A 181 25.311 6.002 22.633 1.00 22.97 C </line>
<line>ATOM 1028 CA SER A 182 29.086 5.626 22.625 1.00 17.90 C </line>
<line>ATOM 1034 CA PHE A 183 30.988 7.869 20.203 1.00 17.97 C </line>
<line>ATOM 1045 CA ALA A 184 31.460 4.855 17.888 1.00 15.84 C </line>
<line>ATOM 1050 CA GLU A 185 27.754 4.021 17.826 1.00 14.85 C </line>
<line>ATOM 1059 CA ALA A 186 26.827 7.670 17.159 1.00 16.57 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLU ALA PHE SER MET LYS THR ARG TYR CYS LYS ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 8.54 12.03 12.07 9.07 10.99 10.52 11.51 8.61 6.46 5.31 5.40 3.81 </line>
<line>LYS CA 6.11 9.50 10.64 8.09 8.99 7.50 8.60 5.81 5.38 5.61 3.80 </line>
<line>CYS CA 5.75 8.09 8.49 5.22 5.82 5.45 6.88 5.41 5.46 3.80 </line>
<line>TYR CA 9.50 11.81 11.79 8.10 8.59 8.34 8.19 6.05 3.80 </line>
<line>ARG CA 10.39 12.84 13.85 10.59 10.22 8.47 7.16 3.82 </line>
<line>THR CA 8.90 10.59 12.41 9.82 8.35 5.53 3.80 </line>
<line>LYS CA 9.31 9.54 11.51 9.51 6.69 3.82 </line>
<line>MET CA 5.92 5.74 7.85 6.45 3.79 </line>
<line>SER CA 6.26 5.23 5.35 3.81 </line>
<line>PHE CA 5.16 5.56 3.83 </line>
<line>ALA CA 5.47 3.80 </line>
<line>GLU CA 3.82 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ALA CA 271</line>
<line>LYS CA 273</line>
<line>CYS CA 258</line>
<line>TYR CA 195</line>
<line>ARG CA 159</line>
<line>THR CA 155</line>
<line>LYS CA 147</line>
<line>MET CA 214</line>
<line>SER CA 273</line>
<line>PHE CA 351</line>
<line>ALA CA 389</line>
<line>GLU CA 341</line>
<line>ALA CA 373</line>
</n14>
</entryChain>
<parallel>
<x>223.55099487304688</x>
<y>120.11399841308594</y>
<z>-47.36399841308594</z>
</parallel>
<rotation>
<x>-0.4650000035762787</x>
<y>0.26100000739097595</y>
<z>0.8460000157356262</z>
<x>-0.4519999921321869</x>
<y>-0.890999972820282</y>
<z>0.026000000536441803</z>
<x>0.7609999775886536</x>
<y>-0.3709999918937683</y>
<z>0.5329999923706055</z>
</rotation>
<rmsd>3.3026490211486816</rmsd>
<dmax>5.735565185546875</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1N32</pdbID>
<pdbChain>G</pdbChain>
<entryIDChain>1N32G</entryIDChain>
<sequence>DAAEG--KGGAV</sequence>
<secondary-structure>HHH -- HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 41127 CA ASP G 126 248.108 134.923 -38.592 1.00 53.13 C </line>
<line>ATOM 41135 CA ALA G 127 244.484 136.073 -38.403 1.00 64.90 C </line>
<line>ATOM 41140 CA ALA G 128 244.916 139.063 -40.703 1.00 79.70 C </line>
<line>ATOM 41145 CA GLU G 129 247.253 136.837 -42.728 1.00 69.98 C </line>
<line>ATOM 41154 CA GLY G 130 244.267 134.572 -43.304 1.00 59.61 C </line>
<line>ATOM 41158 CA LYS G 131 245.589 131.468 -41.560 1.00 63.27 C </line>
<line>ATOM 41167 CA GLY G 132 245.593 130.080 -38.041 1.00 65.77 C </line>
<line>ATOM 41171 CA GLY G 133 243.192 128.069 -35.890 1.00 59.96 C </line>
<line>ATOM 41175 CA ALA G 134 240.718 130.893 -35.388 1.00 52.94 C </line>
<line>ATOM 41180 CA VAL G 135 240.127 131.515 -39.081 1.00 50.57 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ALA GLY GLY LYS GLY GLU ALA ALA ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 8.69 9.01 8.86 5.48 5.20 6.09 4.64 5.64 3.81 </line>
<line>ALA CA 6.34 7.08 8.49 6.11 5.69 5.13 5.19 3.80 </line>
<line>ALA CA 9.09 10.61 12.12 9.39 7.67 5.23 3.81 </line>
<line>GLU CA 9.61 11.49 11.84 8.39 5.74 3.79 </line>
<line>GLY CA 6.66 9.42 9.92 7.05 3.80 </line>
<line>LYS CA 6.00 7.88 7.03 3.78 </line>
<line>GLY CA 5.75 5.61 3.80 </line>
<line>GLY CA 5.61 3.79 </line>
<line>ALA CA 3.79 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ASP CA 354</line>
<line>ALA CA 392</line>
<line>ALA CA 331</line>
<line>GLU CA 247</line>
<line>GLY CA 260</line>
<line>LYS CA 263</line>
<line>GLY CA 314</line>
<line>GLY CA 319</line>
<line>ALA CA 395</line>
<line>VAL CA 369</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1IQV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1IQVA</entryIDChain>
<sequence>LAANKDPKSYAY</sequence>
<secondary-structure>HHH HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1111 CA LEU A 193 21.743 8.153 8.078 1.00 19.88 C </line>
<line>ATOM 1119 CA ALA A 194 23.799 10.302 5.712 1.00 17.61 C </line>
<line>ATOM 1124 CA ALA A 195 24.381 7.373 3.338 1.00 20.08 C </line>
<line>ATOM 1129 CA ASN A 196 20.598 6.948 3.207 1.00 27.26 C </line>
<line>ATOM 1137 CA LYS A 197 19.858 10.653 2.659 1.00 29.01 C </line>
<line>ATOM 1146 CA ASP A 198 17.912 10.713 5.913 1.00 31.89 C </line>
<line>ATOM 1154 CA PRO A 199 17.241 14.232 7.276 1.00 33.89 C </line>
<line>ATOM 1161 CA LYS A 200 17.791 12.852 10.768 1.00 32.81 C </line>
<line>ATOM 1170 CA SER A 201 21.438 13.003 9.713 1.00 26.39 C </line>
<line>ATOM 1176 CA TYR A 202 23.095 16.221 10.844 1.00 26.12 C </line>
<line>ATOM 1188 CA ALA A 203 25.610 16.133 7.983 1.00 21.92 C </line>
<line>ATOM 1193 CA TYR A 204 22.961 15.485 5.352 1.00 22.49 C </line>
</atom-coordinate>
<distance-map>
<line> TYR ALA TYR SER LYS PRO ASP LYS ASN ALA ALA LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 7.92 8.87 8.64 5.13 6.70 7.61 5.09 6.26 5.15 5.48 3.80 </line>
<line>ALA CA 5.26 6.51 7.87 5.37 8.26 7.80 5.90 5.00 5.27 3.81 </line>
<line>ALA CA 8.48 9.99 11.67 9.00 11.34 10.66 7.72 5.63 3.81 </line>
<line>ASN CA 9.11 11.50 12.27 8.93 10.00 8.99 5.36 3.82 </line>
<line>LYS CA 6.34 9.56 10.42 7.60 8.65 6.40 3.79 </line>
<line>ASP CA 6.97 9.64 9.03 5.67 5.31 3.83 </line>
<line>PRO CA 6.16 8.61 7.14 5.01 3.79 </line>
<line>LYS CA 7.94 8.93 6.28 3.80 </line>
<line>SER CA 5.24 5.50 3.79 </line>
<line>TYR CA 5.54 3.81 </line>
<line>ALA CA 3.79 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>LEU CA 365</line>
<line>ALA CA 402</line>
<line>ALA CA 412</line>
<line>ASN CA 288</line>
<line>LYS CA 282</line>
<line>ASP CA 239</line>
<line>PRO CA 239</line>
<line>LYS CA 255</line>
<line>SER CA 349</line>
<line>TYR CA 353</line>
<line>ALA CA 427</line>
<line>TYR CA 389</line>
</n14>
</entryChain>
<parallel>
<x>223.83700561523438</x>
<y>123.1969985961914</y>
<z>-46.69300079345703</z>
</parallel>
<rotation>
<x>-0.3199999928474426</x>
<y>0.4790000021457672</y>
<z>0.8180000185966492</z>
<x>-0.7749999761581421</x>
<y>-0.6290000081062317</y>
<z>0.06599999964237213</z>
<x>0.5450000166893005</x>
<y>-0.6129999756813049</y>
<z>0.5720000267028809</z>
</rotation>
<rmsd>1.5448379516601562</rmsd>
<dmax>3.6815390586853027</dmax>
</indel>