NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1NQPA-2ZLWD
confEVID 1NQPA-2ZLWD
pdbIDA 1NQP
pdbIDB 2ZLW
pdbChainA A
pdbChainB D
identity 0.42179998755455
indelSize 1
alignment <alignment>
<seq1>-VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHH GGGHHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHHH HHHH HHHHHIIIII HHHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHH --HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>WDKVN--EEEVG</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
<line>ATOM 3444 CA GLY D 24 -32.072 6.515 32.744 1.00 15.19 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU GLU GLU ASN VAL LYS ASP TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.84 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 14.65 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 13.34 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 9.66 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 8.13 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.62 5.30 5.54 3.81 </line>
<line>GLU CA 5.13 5.65 3.79 </line>
<line>GLU CA 5.54 3.81 </line>
<line>VAL CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1NQP</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1NQPA</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>H GGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 93 CA TRP A 14 16.361 0.635 14.079 1.00 24.41 C </line>
<line>ATOM 107 CA GLY A 15 19.859 -0.088 15.320 1.00 27.73 C </line>
<line>ATOM 111 CA LYS A 16 20.463 3.644 14.864 1.00 32.78 C </line>
<line>ATOM 120 CA VAL A 17 17.724 4.435 17.394 1.00 33.25 C </line>
<line>ATOM 127 CA GLY A 18 19.706 2.958 20.269 1.00 33.97 C </line>
<line>ATOM 131 CA ALA A 19 19.525 5.037 23.440 1.00 34.11 C </line>
<line>ATOM 136 CA HIS A 20 16.987 7.321 21.741 1.00 32.01 C </line>
<line>ATOM 146 CA ALA A 21 14.279 4.671 22.230 1.00 32.17 C </line>
<line>ATOM 151 CA GLY A 22 12.126 6.337 24.868 1.00 31.96 C </line>
<line>ATOM 155 CA GLU A 23 12.736 9.736 23.315 1.00 26.76 C </line>
<line>ATOM 164 CA TYR A 24 11.541 8.690 19.846 1.00 21.73 C </line>
<line>ATOM 176 CA GLY A 25 8.702 6.567 21.180 1.00 19.95 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.01 11.02 13.46 12.92 9.33 10.19 10.82 7.41 5.22 5.15 3.78 </line>
<line>GLY CA 14.25 12.91 14.53 13.87 10.08 10.22 9.61 5.81 5.41 3.81 </line>
<line>LYS CA 13.67 11.40 12.97 13.30 9.67 8.54 8.74 5.50 3.81 </line>
<line>VAL CA 10.01 7.90 9.38 9.53 5.94 5.27 6.34 3.79 </line>
<line>GLY CA 11.62 9.99 10.19 9.49 6.02 5.35 3.80 </line>
<line>ALA CA 11.16 9.49 8.26 7.65 5.40 3.81 </line>
<line>HIS CA 8.34 5.93 5.14 5.86 3.82 </line>
<line>ALA CA 5.98 5.42 5.40 3.79 </line>
<line>GLY CA 5.04 5.58 3.79 </line>
<line>GLU CA 5.56 3.82 </line>
<line>TYR CA 3.79 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 402</line>
<line>GLY CA 271</line>
<line>LYS CA 267</line>
<line>VAL CA 326</line>
<line>GLY CA 224</line>
<line>ALA CA 187</line>
<line>HIS CA 256</line>
<line>ALA CA 297</line>
<line>GLY CA 285</line>
<line>GLU CA 305</line>
<line>TYR CA 367</line>
<line>GLY CA 405</line>
</n14>
</entryChain>
<parallel>
<x>-53.76100158691406</x>
<y>6.993000030517578</y>
<z>8.637999534606934</z>
</parallel>
<rotation>
<x>-0.9100000262260437</x>
<y>0.20800000429153442</y>
<z>-0.35899999737739563</z>
<x>-0.20000000298023224</x>
<y>-0.9779999852180481</y>
<z>-0.061000000685453415</z>
<x>-0.36399999260902405</x>
<y>0.01600000075995922</y>
<z>0.9309999942779541</z>
</rotation>
<rmsd>1.5535579919815063</rmsd>
<dmax>3.4381918907165527</dmax>
</indel>