NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1ONAD-1H9WA
confEVID 1ONAD-1H9WA
pdbIDA 1ONA
pdbIDB 1H9W
pdbChainA D
pdbChainB A
identity 0.84909999370575
indelSize 1
alignment <alignment>
<seq1>ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK-TNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN</seq1>
<seq2>ADTIVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSAVVSYTGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLKTANSLHFSFNQFSQNPKDLILQGDATTDSDGNLELTKVSSSGDPQGSSVGRALFYAPVHIWEKSAVVASFDATFTFLIKSPDRDPADGITFFIANTDTSIPSGSGGRLLGLFPDAN</seq2>
<ss_1> EEEEEEEE EEEEE EEE EEEEEEEEEE EEEEEEEEE EEEEEEEEEE EEEEEEEEEE EEEEEEEEEEE - EEEEEEE EEEEEEE EEE EE EEEEEE EEEEEEEEEEEE EEEEEEEE GGG </ss_1>
<ss_2> EEEEEEEE EEEEE EEEEE EEEEEEEEEE EEEEEEEEE EEEEEEEE HHHH EEEEEEEEEE EEEEEEEEEEEEE EEEEEEE EEEEE EEE EEE EEEEEE EEEEEEEEEEEE EEEEEEEE GGG </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1ONA</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>1ONAD</entryIDChain>
<sequence>TSKLK-TNALH</sequence>
<secondary-structure>EEE - EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 6129 CA THR D 112 6.156 1.736 38.881 1.00 5.08 C </line>
<line>ATOM 6136 CA SER D 113 7.720 -1.411 40.237 1.00 6.58 C </line>
<line>ATOM 6142 CA LYS D 114 7.806 -4.922 38.826 1.00 11.61 C </line>
<line>ATOM 6151 CA LEU D 115 9.125 -8.145 40.268 1.00 18.83 C </line>
<line>ATOM 6159 CA LYS D 116 9.285 -10.838 37.512 1.00 34.55 C </line>
<line>ATOM 6168 CA THR D 123 5.130 -11.209 37.457 1.00 49.50 C </line>
<line>ATOM 6175 CA ASN D 124 3.883 -8.773 40.209 1.00 36.99 C </line>
<line>ATOM 6183 CA ALA D 125 3.519 -5.030 39.744 1.00 18.21 C </line>
<line>ATOM 6188 CA LEU D 126 2.691 -1.776 41.442 1.00 2.57 C </line>
<line>ATOM 6196 CA HIS D 127 1.993 1.553 39.770 1.00 3.20 C </line>
</atom-coordinate>
<distance-map>
<line> HIS LEU ALA ASN THR LYS LEU LYS SER THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 4.26 5.56 7.31 10.83 13.06 13.03 10.41 6.86 3.77 </line>
<line>SER CA 6.47 5.18 5.57 8.30 10.51 9.94 6.88 3.78 </line>
<line>LYS CA 8.75 6.55 4.39 5.67 6.97 6.24 3.77 </line>
<line>LEU CA 12.05 9.13 6.43 5.28 5.77 3.86 </line>
<line>LYS CA 14.55 11.88 8.48 6.38 4.17 </line>
<line>THR CA 13.34 10.53 6.78 3.88 </line>
<line>ASN CA 10.51 7.20 3.79 </line>
<line>ALA CA 6.76 3.76 </line>
<line>LEU CA 3.79 </line>
<line>HIS CA </line>
</distance-map>
<n14>
<line>THR CA 348</line>
<line>SER CA 386</line>
<line>LYS CA 314</line>
<line>LEU CA 289</line>
<line>LYS CA 203</line>
<line>THR CA 152</line>
<line>ASN CA 206</line>
<line>ALA CA 244</line>
<line>LEU CA 295</line>
<line>HIS CA 287</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1H9W</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1H9WA</entryIDChain>
<sequence>TSKLKTANSLH</sequence>
<secondary-structure>EEEEE EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 852 CA THR A 112 71.127 28.261 19.937 1.00 16.66 C </line>
<line>ATOM 859 CA SER A 113 74.212 26.858 18.281 1.00 19.07 C </line>
<line>ATOM 865 CA LYS A 114 75.332 23.233 18.309 1.00 19.42 C </line>
<line>ATOM 874 CA LEU A 115 78.604 21.832 17.011 1.00 19.09 C </line>
<line>ATOM 882 CA LYS A 116 79.087 18.059 16.871 1.00 27.95 C </line>
<line>ATOM 891 CA THR A 117 82.831 17.592 16.363 1.00 40.25 C </line>
<line>ATOM 898 CA ALA A 123 78.059 18.157 20.743 1.00 30.91 C </line>
<line>ATOM 903 CA ASN A 124 79.307 21.514 21.994 1.00 22.34 C </line>
<line>ATOM 911 CA SER A 125 76.712 24.239 22.264 1.00 21.60 C </line>
<line>ATOM 917 CA LEU A 126 75.842 27.793 23.165 1.00 19.61 C </line>
<line>ATOM 925 CA HIS A 127 72.400 29.075 24.021 1.00 18.65 C </line>
</atom-coordinate>
<distance-map>
<line> HIS LEU SER ASN ALA THR LYS LEU LYS SER THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 4.35 5.73 7.27 10.80 12.28 16.24 13.30 10.29 6.75 3.77 </line>
<line>SER CA 6.41 5.23 5.38 8.26 9.83 12.80 10.16 6.79 3.79 </line>
<line>LYS CA 8.68 6.68 4.31 5.69 6.26 9.58 6.55 3.79 </line>
<line>LEU CA 11.84 9.00 6.08 5.04 5.27 6.02 3.81 </line>
<line>LYS CA 14.74 12.04 8.54 6.18 4.01 3.81 </line>
<line>THR CA 17.30 14.11 10.79 7.71 6.50 </line>
<line>ALA CA 12.73 10.18 6.41 3.79 </line>
<line>ASN CA 10.44 7.27 3.77 </line>
<line>SER CA 6.71 3.77 </line>
<line>LEU CA 3.77 </line>
<line>HIS CA </line>
</distance-map>
<n14>
<line>THR CA 342</line>
<line>SER CA 391</line>
<line>LYS CA 318</line>
<line>LEU CA 295</line>
<line>LYS CA 216</line>
<line>THR CA 185</line>
<line>ALA CA 182</line>
<line>ASN CA 216</line>
<line>SER CA 253</line>
<line>LEU CA 292</line>
<line>HIS CA 281</line>
</n14>
</entryChain>
<parallel>
<x>-69.97699737548828</x>
<y>-28.843000411987305</y>
<z>19.71500015258789</z>
</parallel>
<rotation>
<x>-0.027000000700354576</x>
<y>-0.6729999780654907</y>
<z>0.7390000224113464</z>
<x>-0.028999999165534973</x>
<y>0.7400000095367432</y>
<z>0.671999990940094</z>
<x>-0.9990000128746033</x>
<y>-0.004000000189989805</y>
<z>-0.039000000804662704</z>
</rotation>
<rmsd>0.4177579879760742</rmsd>
<dmax>0.8217229843139648</dmax>
</indel>