NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1PVQB-1XNSA
confEVID 1PVQB-1XNSA
pdbIDA 1PVQ
pdbIDB 1XNS
pdbChainA B
pdbChainB A
identity 0.965799987316132
indelSize 1
alignment <alignment>
<seq1>TSDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRLAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSNSALGGIFGATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNTG----AMVRLLED</seq1>
<seq2>-SDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGAMVRLLED</seq2>
<ss_1> HHHHHHHHHHHH GGG HHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHGGG HHHHHHHHHHH HHHHHHHHHHHHHHHH HHHGGG GGEEE EEEEEE EEE HHHHHHHHHHHHH EEE EEE HHHHHHHHHHHHHHHH HHHHHHHHHHHH HHHHHHH HHHHH ---- </ss_1>
<ss_2>- HHHHHHHHHHH GGG HHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHH GGEEE GGG HHHHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHHHHHHHH HHHHHHH HHHHHH GGG HHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1PVQ</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1PVQB</entryIDChain>
<sequence>IRNTG----AMVRL</sequence>
<secondary-structure> ---- </secondary-structure>
<atom-coordinate>
<line>ATOM 6469 CA ILE B 325 81.663 42.288 93.658 1.00 93.62 C </line>
<line>ATOM 6477 CA ARG B 326 81.666 40.538 97.145 1.00 96.30 C </line>
<line>ATOM 6488 CA ASN B 327 83.471 37.501 98.769 1.00 93.36 C </line>
<line>ATOM 6496 CA THR B 332 91.288 41.741 101.684 1.00 95.83 C </line>
<line>ATOM 6503 CA GLY B 333 91.858 41.689 105.440 1.00 95.16 C </line>
<line>ATOM 6507 CA ALA B 334 92.556 45.327 106.338 1.00 91.92 C </line>
<line>ATOM 6512 CA MET B 335 91.998 44.535 110.055 1.00 91.11 C </line>
<line>ATOM 6520 CA VAL B 336 94.249 41.580 110.760 1.00 93.67 C </line>
<line>ATOM 6527 CA ARG B 337 96.653 43.801 108.918 1.00 94.00 C </line>
<line>ATOM 6538 CA LEU B 338 95.620 46.471 111.434 1.00 94.75 C </line>
</atom-coordinate>
<distance-map>
<line> LEU ARG VAL MET ALA GLY THR ASN ARG ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 22.98 21.44 21.25 19.51 16.99 15.59 12.54 7.23 3.90 </line>
<line>ARG CA 20.83 19.34 18.57 17.01 15.03 13.19 10.71 3.89 </line>
<line>ASN CA 19.71 17.79 16.63 15.80 14.18 11.51 9.36 </line>
<line>THR CA 11.67 9.24 9.55 8.85 6.01 3.80 </line>
<line>GLY CA 8.54 6.29 5.83 5.42 3.81 </line>
<line>ALA CA 6.06 5.08 6.04 3.84 </line>
<line>MET CA 4.33 4.85 3.78 </line>
<line>VAL CA 5.12 3.76 </line>
<line>ARG CA 3.81 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>ILE CA 275</line>
<line>ARG CA 193</line>
<line>ASN CA 134</line>
<line>THR CA 98</line>
<line>GLY CA 80</line>
<line>ALA CA 73</line>
<line>MET CA 74</line>
<line>VAL CA 74</line>
<line>ARG CA 74</line>
<line>LEU CA 74</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1XNS</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1XNSA</entryIDChain>
<sequence>IRNLDSETGAMVRL</sequence>
<secondary-structure> GGG HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3832 CA ILE A 325 23.447 -1.522 -19.784 1.00 71.07 C </line>
<line>ATOM 3840 CA ARG A 326 24.596 2.133 -19.621 1.00 71.42 C </line>
<line>ATOM 3851 CA ASN A 327 22.286 3.604 -22.299 1.00 69.62 C </line>
<line>ATOM 3859 CA LEU A 328 19.158 2.009 -20.909 1.00 69.57 C </line>
<line>ATOM 3867 CA ASP A 329 16.524 4.399 -19.616 1.00 70.01 C </line>
<line>ATOM 3875 CA SER A 330 16.189 2.408 -16.367 1.00 69.24 C </line>
<line>ATOM 3881 CA GLU A 331 19.878 3.164 -15.624 1.00 65.68 C </line>
<line>ATOM 3890 CA THR A 332 19.896 6.956 -16.292 1.00 59.84 C </line>
<line>ATOM 3897 CA GLY A 333 20.439 7.753 -12.610 1.00 53.19 C </line>
<line>ATOM 3901 CA ALA A 334 19.121 9.721 -9.698 1.00 46.84 C </line>
<line>ATOM 3906 CA MET A 335 19.387 13.171 -11.239 1.00 42.33 C </line>
<line>ATOM 3914 CA VAL A 336 17.154 12.238 -14.204 1.00 40.54 C </line>
<line>ATOM 3921 CA ARG A 337 14.690 10.684 -11.769 1.00 43.33 C </line>
<line>ATOM 3932 CA LEU A 338 14.546 13.851 -9.523 1.00 43.11 C </line>
</atom-coordinate>
<distance-map>
<line> LEU ARG VAL MET ALA GLY THR GLU SER ASP LEU ASN ARG ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 20.51 17.03 16.13 17.48 15.71 12.11 9.83 7.21 8.93 9.11 5.67 5.83 3.83 </line>
<line>ARG CA 18.45 15.26 13.67 14.81 13.64 9.90 7.51 6.27 9.02 8.38 5.59 3.83 </line>
<line>ASN CA 18.11 14.79 12.90 14.91 14.36 10.70 7.28 7.11 8.59 6.41 3.78 </line>
<line>LEU CA 17.06 13.37 12.39 14.77 13.61 10.17 6.81 5.46 5.44 3.78 </line>
<line>ASP CA 13.97 10.22 9.55 12.46 11.55 8.70 5.38 5.36 3.83 </line>
<line>SER CA 13.43 9.59 10.11 12.34 10.32 7.79 5.87 3.84 </line>
<line>GLU CA 13.41 9.92 9.58 10.94 8.87 5.52 3.85 </line>
<line>THR CA 11.04 7.84 6.31 8.03 7.19 3.81 </line>
<line>GLY CA 9.02 6.51 5.78 5.69 3.75 </line>
<line>ALA CA 6.17 4.98 5.52 3.79 </line>
<line>MET CA 5.18 5.34 3.83 </line>
<line>VAL CA 5.60 3.80 </line>
<line>ARG CA 3.89 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>ILE CA 341</line>
<line>ARG CA 264</line>
<line>ASN CA 222</line>
<line>LEU CA 236</line>
<line>ASP CA 192</line>
<line>SER CA 214</line>
<line>GLU CA 235</line>
<line>THR CA 179</line>
<line>GLY CA 144</line>
<line>ALA CA 111</line>
<line>MET CA 99</line>
<line>VAL CA 112</line>
<line>ARG CA 103</line>
<line>LEU CA 85</line>
</n14>
</entryChain>
<parallel>
<x>68.38500213623047</x>
<y>36.180999755859375</y>
<z>120.1520004272461</z>
</parallel>
<rotation>
<x>-0.9629999995231628</x>
<y>0.23199999332427979</y>
<z>0.14000000059604645</z>
<x>0.0729999989271164</x>
<y>-0.27399998903274536</y>
<z>0.9589999914169312</z>
<x>0.26100000739097595</x>
<y>0.9330000281333923</y>
<z>0.24699999392032623</z>
</rotation>
<rmsd>3.5269570350646973</rmsd>
<dmax>5.499456882476807</dmax>
</indel>