NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1RABC-2ATCA
confEVID 1RABC-2ATCA
pdbIDA 1RAB
pdbIDB 2ATC
pdbChainA C
pdbChainB A
identity 0.848399996757507
indelSize 1
alignment <alignment>
<seq1>ANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL</seq1>
<seq2>ANPLYQSHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSFQTSMHRLGASVVGFSDSANTSLGKKGQTLANTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQQTEGRLNNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPEYILDMLDEKGIAWSLHSSIEEVMTRVQKERLDPSE-YABVKAQF-LV-RANSLGGLH-NAKMN-AKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL</seq2>
<ss_1> GGG HHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHHHH EEEEE HHHHHHHH EEEEEE HHHHHHHHH EE HHHHHHHHHHHHH EEEEE HHHHHHHHHGGG EEEEE HHHHHHHH EEE GGG EEE IIIII GGGGGG EEE HHHHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHHHHH EEEE HHHHHHHHHH HHHHH EEE HHHHHHH HHHHHHHHHHHHH HHHHHHHHHH EEEE HHHHH EEE - - - - - EEE HHHGGHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ATC</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2ATCA</entryIDChain>
<sequence>LDPSE-YABVK</sequence>
<secondary-structure> - </secondary-structure>
<atom-coordinate>
<line>ATOM 1747 CA LEU A 227 -23.855 -21.131 15.397 1.00 20.00 C </line>
<line>ATOM 1755 CA ASP A 228 -20.425 -20.575 13.689 1.00 20.00 C </line>
<line>ATOM 1763 CA PRO A 229 -20.034 -18.135 10.743 1.00 20.00 C </line>
<line>ATOM 1770 CA SER A 230 -20.353 -19.023 6.972 1.00 20.00 C </line>
<line>ATOM 1776 CA GLU A 231 -18.179 -17.044 4.443 1.00 20.00 C </line>
<line>ATOM 1785 CA TYR A 232 -15.811 -16.429 1.507 1.00 20.00 C </line>
<line>ATOM 1797 CA ALA A 233 -14.060 -19.608 0.394 1.00 20.00 C </line>
<line>ATOM 1802 CA ASX A 234 -17.395 -20.983 -0.938 1.00 20.00 C </line>
<line>ATOM 1810 CA VAL A 235 -18.745 -19.134 -4.048 1.00 20.00 C </line>
<line>ATOM 1817 CA LYS A 236 -20.616 -15.848 -3.719 1.00 20.00 C </line>
</atom-coordinate>
<distance-map>
<line> LYS VAL ASX ALA TYR GLU SER PRO ASP LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 20.10 20.20 17.57 17.98 16.73 13.00 9.36 6.73 3.87 </line>
<line>ASP CA 18.04 17.87 14.94 14.77 13.67 10.15 6.89 3.85 </line>
<line>PRO CA 14.65 14.88 12.31 12.04 10.30 6.66 3.89 </line>
<line>SER CA 11.16 11.14 8.67 9.12 7.56 3.88 </line>
<line>GLU CA 8.60 8.76 6.71 6.32 3.82 </line>
<line>TYR CA 7.12 6.84 5.41 3.80 </line>
<line>ALA CA 8.60 6.47 3.85 </line>
<line>ASX CA 6.67 3.86 </line>
<line>VAL CA 3.80 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>LEU CA 527</line>
<line>ASP CA 464</line>
<line>PRO CA 397</line>
<line>SER CA 362</line>
<line>GLU CA 274</line>
<line>TYR CA 189</line>
<line>ALA CA 164</line>
<line>ASX CA 189</line>
<line>VAL CA 137</line>
<line>LYS CA 119</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1RAB</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1RABC</entryIDChain>
<sequence>MTRVQKERLDP</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 5357 CA MET C 227 81.636 59.124 51.202 1.00 16.64 C </line>
<line>ATOM 5365 CA THR C 228 78.829 57.915 48.957 1.00 30.11 C </line>
<line>ATOM 5372 CA ARG C 229 78.570 55.400 46.224 1.00 42.72 C </line>
<line>ATOM 5383 CA VAL C 230 78.046 56.556 42.773 1.00 42.51 C </line>
<line>ATOM 5390 CA GLN C 231 75.748 54.129 40.934 1.00 53.27 C </line>
<line>ATOM 5399 CA LYS C 232 77.175 53.841 37.352 1.00 53.54 C </line>
<line>ATOM 5408 CA GLU C 233 73.619 54.042 35.737 1.00 50.48 C </line>
<line>ATOM 5417 CA ARG C 234 73.378 57.599 36.863 1.00 52.39 C </line>
<line>ATOM 5428 CA LEU C 235 76.218 58.243 34.397 1.00 48.08 C </line>
<line>ATOM 5436 CA ASP C 236 77.045 56.203 31.360 1.00 48.93 C </line>
<line>ATOM 5444 CA PRO C 237 79.983 53.591 31.385 1.00 47.30 C </line>
</atom-coordinate>
<distance-map>
<line> PRO ASP LEU ARG GLU LYS GLN VAL ARG THR MET </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>MET CA 20.64 20.57 17.68 16.62 18.15 15.48 12.85 9.51 6.93 3.79 </line>
<line>THR CA 18.13 17.77 14.80 13.27 14.73 12.41 9.39 6.38 3.72 </line>
<line>ARG CA 15.02 14.96 12.39 10.93 11.68 9.12 6.13 3.68 </line>
<line>VAL CA 11.93 11.46 8.74 7.60 8.68 6.13 3.81 </line>
<line>GLN CA 10.46 9.88 7.74 5.85 5.62 3.87 </line>
<line>LYS CA 6.60 6.44 5.39 5.36 3.91 </line>
<line>GLU CA 7.72 5.96 5.12 3.74 </line>
<line>ARG CA 9.47 6.76 3.82 </line>
<line>LEU CA 6.70 3.75 </line>
<line>ASP CA 3.93 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>MET CA 550</line>
<line>THR CA 475</line>
<line>ARG CA 412</line>
<line>VAL CA 397</line>
<line>GLN CA 307</line>
<line>LYS CA 265</line>
<line>GLU CA 185</line>
<line>ARG CA 230</line>
<line>LEU CA 232</line>
<line>ASP CA 174</line>
<line>PRO CA 147</line>
</n14>
</entryChain>
<parallel>
<x>-95.7699966430664</x>
<y>-75.74199676513672</y>
<z>-35.61000061035156</z>
</parallel>
<rotation>
<x>-0.9929999709129333</x>
<y>-0.11500000208616257</y>
<z>-0.03799999877810478</z>
<x>0.11299999803304672</x>
<y>-0.9919999837875366</y>
<z>0.04699999839067459</z>
<x>-0.0430000014603138</x>
<y>0.041999999433755875</y>
<z>0.9980000257492065</z>
</rotation>
<rmsd>0.9023230075836182</rmsd>
<dmax>1.4161930084228516</dmax>
</indel>