NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1WEEA-2DNAA
confEVID 1WEEA-2DNAA
pdbIDA 1WEE
pdbIDB 2DNA
pdbChainA A
pdbChainB A
identity 0.192300006747246
indelSize 1
alignment <alignment>
<seq1>GSSGSSGMERGVDNWKVDCKCGTKDDDGERMLACDGCGVWHHT--RCIGINNADALPSKFLCFRCIELS----GPSSG</seq1>
<seq2>GSSGSSGPSHSLQAPEVRFSKEMECLQAMGFV----------NYNANLQALIATDG-DTNAAIYKLKSSQGFSGPSSG</seq2>
<ss_1> EEEE EEEEE-- HHHHHH ---- </ss_1>
<ss_2> HHHHHHHHH ---------- HHHHHHHHH - HHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2DNA</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2DNAA</entryIDChain>
<sequence>IATDG-DTNAA</sequence>
<secondary-structure>H - HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 542 CA ILE A 42 -3.055 4.376 -4.693 1.00 0.00 C </line>
<line>ATOM 560 CA ALA A 43 -6.675 4.021 -3.646 1.00 0.00 C </line>
<line>ATOM 570 CA THR A 44 -5.869 6.022 -0.537 1.00 0.00 C </line>
<line>ATOM 584 CA ASP A 45 -3.382 8.281 -2.279 1.00 0.00 C </line>
<line>ATOM 595 CA GLY A 46 -0.814 7.184 0.276 1.00 0.00 C </line>
<line>ATOM 602 CA ASP A 47 -2.742 6.362 3.428 1.00 0.00 C </line>
<line>ATOM 613 CA THR A 48 -1.799 3.537 5.763 1.00 0.00 C </line>
<line>ATOM 627 CA ASN A 49 -4.723 3.892 8.141 1.00 0.00 C </line>
<line>ATOM 640 CA ALA A 50 -7.243 3.839 5.318 1.00 0.00 C </line>
<line>ATOM 650 CA ALA A 51 -5.149 1.331 3.407 1.00 0.00 C </line>
</atom-coordinate>
<distance-map>
<line> ALA ALA ASN THR ASP GLY ASP THR ALA ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 8.90 10.86 12.95 10.56 8.37 6.13 4.60 5.28 3.79 </line>
<line>ALA CA 7.70 8.98 11.95 10.61 8.43 7.73 5.56 3.78 </line>
<line>THR CA 6.17 6.40 9.01 7.90 5.06 5.25 3.78 </line>
<line>ASP CA 9.15 9.61 11.39 9.47 6.05 3.78 </line>
<line>GLY CA 7.93 8.83 9.38 6.66 3.79 </line>
<line>ASP CA 5.58 5.50 5.68 3.78 </line>
<line>THR CA 4.65 5.47 3.79 </line>
<line>ASN CA 5.40 3.78 </line>
<line>ALA CA 3.79 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ILE CA 457</line>
<line>ALA CA 404</line>
<line>THR CA 416</line>
<line>ASP CA 392</line>
<line>GLY CA 476</line>
<line>ASP CA 458</line>
<line>THR CA 520</line>
<line>ASN CA 396</line>
<line>ALA CA 382</line>
<line>ALA CA 533</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1WEE</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1WEEA</entryIDChain>
<sequence>NADALPSKFLC</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 687 CA ASN A 50 13.311 4.026 -8.531 1.00 0.00 C </line>
<line>ATOM 701 CA ALA A 51 14.615 1.514 -11.072 1.00 0.00 C </line>
<line>ATOM 711 CA ASP A 52 11.242 -0.243 -11.124 1.00 0.00 C </line>
<line>ATOM 723 CA ALA A 53 7.865 1.474 -11.458 1.00 0.00 C </line>
<line>ATOM 733 CA LEU A 54 5.351 2.094 -8.671 1.00 0.00 C </line>
<line>ATOM 752 CA PRO A 55 2.467 -0.304 -7.909 1.00 0.00 C </line>
<line>ATOM 766 CA SER A 56 -0.975 0.897 -8.995 1.00 0.00 C </line>
<line>ATOM 777 CA LYS A 57 -2.081 0.346 -5.398 1.00 0.00 C </line>
<line>ATOM 799 CA PHE A 58 -0.173 -0.194 -2.151 1.00 0.00 C </line>
<line>ATOM 819 CA LEU A 59 -1.795 -1.324 1.099 1.00 0.00 C </line>
<line>ATOM 838 CA CYS A 60 -0.160 -1.194 4.531 1.00 0.00 C </line>
</atom-coordinate>
<distance-map>
<line> CYS LEU PHE LYS SER PRO LEU ALA ASP ALA ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 19.48 18.70 15.50 16.13 14.63 11.69 8.19 6.69 5.41 3.80 </line>
<line>ALA CA 21.66 20.63 17.35 17.67 15.74 12.68 9.59 6.76 3.80 </line>
<line>ASP CA 19.39 17.90 14.52 14.51 12.45 9.35 6.80 3.80 </line>
<line>ALA CA 18.09 16.09 12.41 11.70 9.19 6.70 3.80 </line>
<line>LEU CA 14.68 12.58 8.85 8.31 6.45 3.83 </line>
<line>PRO CA 12.75 10.02 6.34 5.24 3.80 </line>
<line>SER CA 13.71 10.37 6.98 3.80 </line>
<line>LYS CA 10.23 6.71 3.80 </line>
<line>PHE CA 6.76 3.80 </line>
<line>LEU CA 3.80 </line>
<line>CYS CA </line>
</distance-map>
<n14>
<line>ASN CA 291</line>
<line>ALA CA 210</line>
<line>ASP CA 244</line>
<line>ALA CA 262</line>
<line>LEU CA 365</line>
<line>PRO CA 352</line>
<line>SER CA 264</line>
<line>LYS CA 351</line>
<line>PHE CA 467</line>
<line>LEU CA 459</line>
<line>CYS CA 512</line>
</n14>
</entryChain>
<parallel>
<x>-9.777000427246094</x>
<y>4.21999979019165</y>
<z>9.232000350952148</z>
</parallel>
<rotation>
<x>-0.4350000023841858</x>
<y>-0.2809999883174896</y>
<z>-0.8560000061988831</z>
<x>0.8889999985694885</x>
<y>-0.289000004529953</y>
<z>-0.3569999933242798</z>
<x>-0.1469999998807907</x>
<y>-0.9150000214576721</y>
<z>0.375</z>
</rotation>
<rmsd>3.275186061859131</rmsd>
<dmax>4.278153896331787</dmax>
</indel>