1YDVA-1AW2A | |
confEVID | 1YDVA-1AW2A |
pdbIDA | 1YDV |
pdbIDB | 1AW2 |
pdbChainA | A |
pdbChainB | A |
identity | 0.380400002002716 |
indelSize | 2 |
alignment | <alignment> <seq1>RKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLL---QSKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAF-----VDLIDNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIKSAM----</seq1> <seq2>RHPVVMGNWKLNGSKEMVVDLLNGLNAELEGVTGVDVAVAPPALFVDLAERTLTEAGSAIILGAQNTDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEAL---EGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAEK-SEAVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALDAKSFAAIAKAAAEAKA</seq2> <ss_1> EEEE HHHHHHHHHHGGG EEEEE GGGHHHHHHH --- EEEE HHHHHH EEEE HHHH HHHHHHHHHHHH EEEEEE HHHHH HHHHHHHHHH -----GGG EEE HHHHHHHHHHHHHHHHH HHHHHH EE HHHHH EEEE GGGG -GGGHHHHH ----</ss_1> <ss_2> EEEE HHHHHHHHHHHHHH EEEE HHHHHHHHHH EEEE HHHH EEEE HHHHH HHHHHHHHHHHHH EEEEEE HHHHH HHHHHHHHHHHHHHHH GGGG--- EEEE HHHHHHHHHHHHHHHH - HHHHHH EEEE HHHHH EEEE GGGG HHHHHHHHHHHHHH </ss_2> </alignment> |
indel | <indel> <confEVID></confEVID> <index>0</index> <entryChain> <pdbID>1YDV</pdbID> <pdbChain>A</pdbChain> <entryIDChain>1YDVA</entryIDChain> <sequence>NASLK-ESFVD</sequence> <secondary-structure>GGGG -GGGHH</secondary-structure> <atom-coordinate> <line>ATOM 1837 CA ASN A 233 31.411 -2.767 8.991 1.00 14.63 C </line> <line>ATOM 1845 CA ALA A 234 29.759 -0.668 6.283 1.00 9.32 C </line> <line>ATOM 1850 CA SER A 235 29.561 2.303 8.682 1.00 3.00 C </line> <line>ATOM 1856 CA LEU A 236 33.374 2.553 8.641 1.00 11.93 C </line> <line>ATOM 1864 CA LYS A 237 33.218 3.391 4.939 1.00 14.72 C </line> <line>ATOM 1873 CA GLU A 238 32.410 6.691 3.227 1.00 19.30 C </line> <line>ATOM 1882 CA SER A 239 29.671 4.876 1.285 1.00 11.68 C </line> <line>ATOM 1888 CA PHE A 240 27.684 4.720 4.544 1.00 6.64 C </line> <line>ATOM 1899 CA VAL A 241 25.961 7.893 3.271 1.00 9.94 C </line> <line>ATOM 1906 CA ASP A 242 24.141 5.792 0.677 1.00 10.65 C </line> </atom-coordinate> <distance-map> <line> ASP VAL PHE SER GLU LYS LEU SER ALA ASN </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>ASN CA 13.97 13.27 9.47 10.99 11.12 7.59 5.68 5.41 3.80 </line> <line>ALA CA 10.23 9.84 6.03 7.46 8.40 5.50 5.39 3.82 </line> <line>SER CA 10.28 8.57 5.15 7.83 7.56 5.34 3.82 </line> <line>LEU CA 12.62 10.60 7.34 8.56 6.88 3.80 </line> <line>LYS CA 10.31 8.70 5.71 5.30 3.80 </line> <line>GLU CA 8.70 6.56 5.29 3.82 </line> <line>SER CA 5.64 5.18 3.82 </line> <line>PHE CA 5.35 3.83 </line> <line>VAL CA 3.80 </line> <line>ASP CA </line> </distance-map> <n14> <line>ASN CA 306</line> <line>ALA CA 326</line> <line>SER CA 409</line> <line>LEU CA 349</line> <line>LYS CA 300</line> <line>GLU CA 281</line> <line>SER CA 275</line> <line>PHE CA 382</line> <line>VAL CA 372</line> <line>ASP CA 315</line> </n14> </entryChain> <entryChain> <pdbID>1AW2</pdbID> <pdbChain>A</pdbChain> <entryIDChain>1AW2A</entryIDChain> <sequence>GAALDAKSFAA</sequence> <secondary-structure>GGGG HHHHHH</secondary-structure> <atom-coordinate> <line>ATOM 1736 CA GLY A 236 22.982 16.876 21.469 1.00 4.09 C </line> <line>ATOM 1740 CA ALA A 237 26.647 17.849 21.831 1.00 8.96 C </line> <line>ATOM 1745 CA ALA A 238 27.158 14.333 23.281 1.00 11.00 C </line> <line>ATOM 1750 CA LEU A 239 26.648 12.826 19.807 1.00 9.93 C </line> <line>ATOM 1758 CA ASP A 240 29.915 14.187 18.439 1.00 11.49 C </line> <line>ATOM 1766 CA ALA A 241 33.334 13.238 19.836 1.00 11.44 C </line> <line>ATOM 1771 CA LYS A 242 34.914 16.618 19.003 1.00 10.82 C </line> <line>ATOM 1780 CA SER A 243 32.113 18.648 20.600 1.00 4.03 C </line> <line>ATOM 1786 CA PHE A 244 31.696 16.453 23.670 1.00 4.87 C </line> <line>ATOM 1797 CA ALA A 245 35.502 16.330 24.326 1.00 5.13 C </line> <line>ATOM 1802 CA ALA A 246 35.652 20.137 24.060 1.00 2.15 C </line> </atom-coordinate> <distance-map> <line> ALA ALA PHE SER LYS ALA ASP LEU ALA ALA GLY </line> <line> CA CA CA CA CA CA CA CA CA CA CA </line> <line>GLY CA 13.34 12.85 9.00 9.34 12.19 11.09 8.03 5.71 5.21 3.81 </line> <line>ALA CA 9.55 9.32 5.55 5.66 8.82 8.36 5.97 5.42 3.84 </line> <line>ALA CA 10.32 8.64 5.02 7.10 9.15 7.16 5.57 3.82 </line> <line>LEU CA 12.35 10.54 7.32 8.02 9.13 6.70 3.79 </line> <line>ASP CA 10.00 8.39 5.97 5.42 5.59 3.81 </line> <line>ALA CA 8.41 5.87 5.26 5.60 3.82 </line> <line>LYS CA 6.20 5.36 5.67 3.81 </line> <line>SER CA 5.17 5.54 3.80 </line> <line>PHE CA 5.42 3.86 </line> <line>ALA CA 3.82 </line> <line>ALA CA </line> </distance-map> <n14> <line>GLY CA 302</line> <line>ALA CA 335</line> <line>ALA CA 414</line> <line>LEU CA 347</line> <line>ASP CA 312</line> <line>ALA CA 318</line> <line>LYS CA 259</line> <line>SER CA 293</line> <line>PHE CA 392</line> <line>ALA CA 376</line> <line>ALA CA 332</line> </n14> </entryChain> <parallel> <x>1.8769999742507935</x> <y>-13.336000442504883</y> <z>-15.189000129699707</z> </parallel> <rotation> <x>-0.12300000339746475</x> <y>0.8479999899864197</y> <z>-0.515999972820282</z> <x>-0.35100001096725464</x> <y>-0.5239999890327454</y> <z>-0.7770000100135803</z> <x>-0.9279999732971191</x> <y>0.08500000089406967</y> <z>0.3619999885559082</z> </rotation> <rmsd>1.0204260349273682</rmsd> <dmax>1.83843994140625</dmax> </indel> <indel> <confEVID></confEVID> <index>1</index> <entryChain> <pdbID>1AW2</pdbID> <pdbChain>A</pdbChain> <entryIDChain>1AW2A</entryIDChain> <sequence>HIAEK-SEAVA</sequence> <secondary-structure>HHH - HHHH</secondary-structure> <atom-coordinate> <line>ATOM 1438 CA HIS A 195 18.530 23.778 50.504 1.00 12.63 C </line> <line>ATOM 1448 CA ILE A 196 20.596 20.662 50.924 1.00 12.21 C </line> <line>ATOM 1456 CA ALA A 197 22.905 22.573 53.277 1.00 10.21 C </line> <line>ATOM 1461 CA GLU A 198 20.028 23.507 55.513 1.00 16.07 C </line> <line>ATOM 1470 CA LYS A 199 19.990 19.772 56.339 1.00 13.23 C </line> <line>ATOM 1479 CA SER A 200 23.688 19.016 56.047 1.00 13.83 C </line> <line>ATOM 1485 CA GLU A 201 26.661 21.167 55.172 1.00 15.20 C </line> <line>ATOM 1494 CA ALA A 202 28.932 18.231 54.684 1.00 11.70 C </line> <line>ATOM 1499 CA VAL A 203 26.595 16.675 52.117 1.00 15.01 C </line> <line>ATOM 1506 CA ALA A 204 25.941 20.011 50.371 1.00 5.72 C </line> </atom-coordinate> <distance-map> <line> ALA VAL ALA GLU SER LYS GLU ALA ILE HIS </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>HIS CA 8.31 10.87 12.51 9.73 8.94 7.23 5.24 5.32 3.76 </line> <line>ILE CA 5.41 7.30 9.46 7.42 6.21 5.52 5.43 3.81 </line> <line>ALA CA 4.92 7.05 7.56 4.44 4.58 5.07 3.76 </line> <line>GLU CA 8.58 10.07 10.38 7.04 5.82 3.83 </line> <line>LYS CA 8.43 8.43 9.22 6.91 3.79 </line> <line>SER CA 6.19 5.42 5.47 3.77 </line> <line>GLU CA 4.99 5.43 3.74 </line> <line>ALA CA 5.54 3.80 </line> <line>VAL CA 3.82 </line> <line>ALA CA </line> </distance-map> <n14> <line>HIS CA 325</line> <line>ILE CA 363</line> <line>ALA CA 260</line> <line>GLU CA 205</line> <line>LYS CA 224</line> <line>SER CA 218</line> <line>GLU CA 199</line> <line>ALA CA 189</line> <line>VAL CA 271</line> <line>ALA CA 312</line> </n14> </entryChain> <entryChain> <pdbID>1YDV</pdbID> <pdbChain>A</pdbChain> <entryIDChain>1YDVA</entryIDChain> <sequence>IVKDTCGEKQA</sequence> <secondary-structure>HHHH HHHH</secondary-structure> <atom-coordinate> <line>ATOM 1520 CA ILE A 191 4.525 -9.711 21.562 1.00 14.96 C </line> <line>ATOM 1528 CA VAL A 192 4.843 -6.033 22.550 1.00 12.60 C </line> <line>ATOM 1535 CA LYS A 193 1.177 -5.494 21.631 1.00 17.80 C </line> <line>ATOM 1544 CA ASP A 194 -0.043 -8.464 23.658 1.00 21.00 C </line> <line>ATOM 1552 CA THR A 195 2.095 -7.564 26.674 1.00 22.73 C </line> <line>ATOM 1559 CA CYS A 196 1.913 -3.757 26.652 1.00 18.96 C </line> <line>ATOM 1565 CA GLY A 197 -0.755 -2.487 24.283 1.00 18.61 C </line> <line>ATOM 1569 CA GLU A 198 -1.551 -1.645 20.660 1.00 22.02 C </line> <line>ATOM 1578 CA LYS A 199 -0.586 2.016 20.845 1.00 19.06 C </line> <line>ATOM 1587 CA GLN A 200 2.700 1.022 22.466 1.00 13.81 C </line> <line>ATOM 1596 CA ALA A 201 3.421 -1.590 19.795 1.00 13.67 C </line> </atom-coordinate> <distance-map> <line> ALA GLN LYS GLU GLY CYS THR ASP LYS VAL ILE </line> <line> CA CA CA CA CA CA CA CA CA CA CA </line> <line>ILE CA 8.38 10.92 12.81 10.14 9.35 8.26 6.05 5.18 5.38 3.82 </line> <line>VAL CA 5.42 7.37 9.86 7.98 6.85 5.53 5.19 5.57 3.82 </line> <line>LYS CA 4.86 6.74 7.75 4.82 4.45 5.36 5.53 3.80 </line> <line>ASP CA 8.61 9.95 10.86 7.60 6.05 5.91 3.80 </line> <line>THR CA 9.21 9.58 11.53 9.19 6.29 3.81 </line> <line>CYS CA 7.35 6.40 8.56 7.24 3.79 </line> <line>GLY CA 6.20 5.25 5.67 3.80 </line> <line>GLU CA 5.05 5.33 3.79 </line> <line>LYS CA 5.49 3.80 </line> <line>GLN CA 3.80 </line> <line>ALA CA </line> </distance-map> <n14> <line>ILE CA 333</line> <line>VAL CA 367</line> <line>LYS CA 262</line> <line>ASP CA 212</line> <line>THR CA 241</line> <line>CYS CA 249</line> <line>GLY CA 201</line> <line>GLU CA 195</line> <line>LYS CA 194</line> <line>GLN CA 270</line> <line>ALA CA 332</line> </n14> </entryChain> <parallel> <x>21.452999114990234</x> <y>26.01099967956543</y> <z>31.325000762939453</z> </parallel> <rotation> <x>-0.39800000190734863</x> <y>-0.4020000100135803</y> <z>-0.824999988079071</z> <x>0.7269999980926514</x> <y>-0.6869999766349792</y> <z>-0.017000000923871994</z> <x>-0.5590000152587891</x> <y>-0.6060000061988831</y> <z>0.5659999847412109</z> </rotation> <rmsd>0.8533030152320862</rmsd> <dmax>1.982319951057434</dmax> </indel> |