NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1YDVA-2VELA
confEVID 1YDVA-2VELA
pdbIDA 1YDV
pdbIDB 2VEL
pdbChainA A
pdbChainB A
identity 0.365500003099442
indelSize 4
alignment <alignment>
<seq1>--RKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQ-SKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKESFVDIIKSAM</seq1>
<seq2>SKPQPIAAANWKSGSPDS-LSELIDLFNSTSIN-HDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-GN-------ADALASLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLAG---LKPEFVDIIKATQ</seq2>
<ss_1>-- EEEE HHHHHHHHHHGGG EEEEE GGGHHHHHHH - EEEE HHHHHH EEEE HHHH HHHHHHHHHHHH EEEEEE HHHHH HHHHHHHHHH GGG -- EEE HHHHHHHHHHHHHHHHH HHHHHH EE HHHHH EEEE GGGG GGGHHHHH </ss_1>
<ss_2> EEEEE -HHHHHHHHHH - EEEE HHHHHHHHH EEEE - -------HHHHHHHHH EEEE HHHHHHHHHHHHH EEEEEE HHHHH HHHHHHHHHHHHGGG GGGGGGEEEEE HHHHHHHHHHHHHHHHH HHHHHH EEEE HHHHHHHH EEEEE--- HHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1YDV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1YDVA</entryIDChain>
<sequence>RKLLQ-SKFST</sequence>
<secondary-structure>HHH - EE</secondary-structure>
<atom-coordinate>
<line>ATOM 399 CA ARG A 52 31.147 14.762 18.809 1.00 9.76 C </line>
<line>ATOM 410 CA LYS A 53 33.347 17.753 18.041 1.00 15.49 C </line>
<line>ATOM 419 CA LEU A 54 33.857 16.754 14.381 1.00 11.67 C </line>
<line>ATOM 427 CA LEU A 55 30.320 15.596 13.578 1.00 10.26 C </line>
<line>ATOM 435 CA GLN A 56 27.820 18.364 12.808 1.00 9.68 C </line>
<line>ATOM 444 CA SER A 57 24.763 18.649 15.090 1.00 9.87 C </line>
<line>ATOM 450 CA LYS A 58 22.476 16.827 12.602 1.00 5.93 C </line>
<line>ATOM 459 CA PHE A 59 23.954 13.573 13.900 1.00 9.06 C </line>
<line>ATOM 470 CA SER A 60 23.283 12.115 17.357 1.00 4.85 C </line>
<line>ATOM 476 CA THR A 61 25.989 10.231 19.280 1.00 5.57 C </line>
</atom-coordinate>
<distance-map>
<line> THR SER PHE LYS SER GLN LEU LEU LYS ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 6.88 8.42 8.79 10.86 8.35 7.75 5.36 5.56 3.79 </line>
<line>LYS CA 10.60 11.56 11.08 12.19 9.12 7.64 5.81 3.83 </line>
<line>LEU CA 11.33 11.92 10.41 11.52 9.32 6.44 3.81 </line>
<line>LEU CA 8.95 8.71 6.69 8.00 6.52 3.81 </line>
<line>GLN CA 10.55 8.96 6.25 5.56 3.83 </line>
<line>SER CA 9.48 7.07 5.28 3.84 </line>
<line>LYS CA 10.02 6.74 3.80 </line>
<line>PHE CA 6.65 3.81 </line>
<line>SER CA 3.82 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ARG CA 348</line>
<line>LYS CA 272</line>
<line>LEU CA 281</line>
<line>LEU CA 340</line>
<line>GLN CA 278</line>
<line>SER CA 265</line>
<line>LYS CA 295</line>
<line>PHE CA 411</line>
<line>SER CA 426</line>
<line>THR CA 464</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2VEL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2VELA</entryIDChain>
<sequence>KERLSHPKFVI</sequence>
<secondary-structure>HHH EE</secondary-structure>
<atom-coordinate>
<line>ATOM 373 CA LYS A 52 19.122 -18.684 5.436 1.00 22.67 C </line>
<line>ATOM 382 CA GLU A 53 21.236 -21.817 6.017 1.00 22.88 C </line>
<line>ATOM 391 CA ARG A 54 24.035 -19.767 7.387 1.00 20.79 C </line>
<line>ATOM 402 CA LEU A 55 22.870 -16.527 8.983 1.00 18.66 C </line>
<line>ATOM 410 CA SER A 56 21.812 -17.344 12.503 1.00 16.45 C </line>
<line>ATOM 416 CA HIS A 57 22.097 -13.937 14.206 1.00 14.41 C </line>
<line>ATOM 426 CA PRO A 58 18.601 -13.571 15.725 1.00 13.78 C </line>
<line>ATOM 433 CA LYS A 59 18.554 -9.772 15.326 1.00 13.85 C </line>
<line>ATOM 442 CA PHE A 60 18.996 -10.585 11.647 1.00 13.86 C </line>
<line>ATOM 453 CA VAL A 61 16.313 -11.561 9.194 1.00 15.40 C </line>
<line>ATOM 460 CA ILE A 62 16.721 -12.671 5.609 1.00 16.21 C </line>
</atom-coordinate>
<distance-map>
<line> ILE VAL PHE LYS PRO HIS SER LEU ARG GLU LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 6.48 8.53 10.21 13.33 11.50 10.41 7.68 5.59 5.40 3.82 </line>
<line>GLU CA 10.21 11.81 12.76 15.46 13.01 11.40 7.90 6.28 3.73 </line>
<line>ARG CA 10.34 11.41 11.31 13.89 11.72 9.18 6.08 3.80 </line>
<line>LEU CA 8.00 8.23 7.58 10.22 8.51 5.88 3.77 </line>
<line>SER CA 9.76 8.64 7.37 8.71 5.91 3.82 </line>
<line>HIS CA 10.22 8.01 5.23 5.58 3.83 </line>
<line>PRO CA 10.33 7.21 5.07 3.82 </line>
<line>LYS CA 10.30 6.77 3.79 </line>
<line>PHE CA 6.78 3.76 </line>
<line>VAL CA 3.78 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>LYS CA 338</line>
<line>GLU CA 235</line>
<line>ARG CA 267</line>
<line>LEU CA 337</line>
<line>SER CA 265</line>
<line>HIS CA 294</line>
<line>PRO CA 261</line>
<line>LYS CA 322</line>
<line>PHE CA 416</line>
<line>VAL CA 426</line>
<line>ILE CA 463</line>
</n14>
</entryChain>
<parallel>
<x>7.807000160217285</x>
<y>32.542999267578125</y>
<z>4.5229997634887695</z>
</parallel>
<rotation>
<x>0.5370000004768372</x>
<y>-0.04600000008940697</y>
<z>-0.8420000076293945</z>
<x>-0.6399999856948853</x>
<y>-0.6729999780654907</y>
<z>-0.3709999918937683</z>
<x>-0.550000011920929</x>
<y>0.7379999756813049</y>
<z>-0.39100000262260437</z>
</rotation>
<rmsd>1.4279860258102417</rmsd>
<dmax>2.412954092025757</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1YDV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1YDVA</entryIDChain>
<sequence>VDLID--NFDNV</sequence>
<secondary-structure>GGG -- </secondary-structure>
<atom-coordinate>
<line>ATOM 1200 CA VAL A 151 9.782 -5.352 28.287 1.00 13.86 C </line>
<line>ATOM 1207 CA ASP A 152 7.919 -4.376 31.480 1.00 10.33 C </line>
<line>ATOM 1215 CA LEU A 153 10.490 -1.632 32.204 1.00 11.65 C </line>
<line>ATOM 1223 CA ILE A 154 9.682 0.378 29.074 1.00 10.94 C </line>
<line>ATOM 1231 CA ASP A 155 7.876 3.550 30.119 1.00 14.78 C </line>
<line>ATOM 1239 CA ASN A 156 8.147 5.785 27.029 1.00 11.18 C </line>
<line>ATOM 1247 CA PHE A 157 8.038 3.792 23.783 1.00 6.98 C </line>
<line>ATOM 1258 CA ASP A 158 9.910 6.484 21.842 1.00 14.65 C </line>
<line>ATOM 1266 CA ASN A 159 12.952 6.138 24.133 1.00 11.25 C </line>
<line>ATOM 1274 CA VAL A 160 13.690 2.426 23.692 1.00 7.27 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ASN ASP PHE ASN ASP ILE LEU ASP VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 9.84 12.62 13.48 10.34 11.33 9.29 5.78 5.45 3.82 </line>
<line>ASP CA 11.84 13.78 14.66 11.22 11.10 8.04 5.61 3.83 </line>
<line>LEU CA 9.96 11.47 13.17 10.31 9.34 6.17 3.81 </line>
<line>ILE CA 7.02 8.26 9.47 6.51 5.98 3.80 </line>
<line>ASP CA 8.74 8.26 9.01 6.34 3.82 </line>
<line>ASN CA 7.29 5.62 5.52 3.81 </line>
<line>PHE CA 5.82 5.46 3.81 </line>
<line>ASP CA 5.85 3.82 </line>
<line>ASN CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>VAL CA 398</line>
<line>ASP CA 280</line>
<line>LEU CA 303</line>
<line>ILE CA 358</line>
<line>ASP CA 275</line>
<line>ASN CA 272</line>
<line>PHE CA 351</line>
<line>ASP CA 333</line>
<line>ASN CA 378</line>
<line>VAL CA 480</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2VEL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2VELA</entryIDChain>
<sequence>AKKLKKADWAKV</sequence>
<secondary-structure>GGG GGGGGGE</secondary-structure>
<atom-coordinate>
<line>ATOM 1083 CA ALA A 151 0.171 4.094 -0.581 1.00 18.31 C </line>
<line>ATOM 1088 CA LYS A 152 -2.674 3.813 -3.119 1.00 19.32 C </line>
<line>ATOM 1097 CA LYS A 153 -2.402 0.010 -2.999 1.00 18.63 C </line>
<line>ATOM 1106 CA LEU A 154 -2.205 -0.348 0.756 1.00 17.68 C </line>
<line>ATOM 1114 CA LYS A 155 -4.512 0.265 3.691 1.00 18.77 C </line>
<line>ATOM 1123 CA LYS A 156 -3.699 1.877 7.003 1.00 19.52 C </line>
<line>ATOM 1132 CA ALA A 157 -3.139 -1.439 8.846 1.00 19.74 C </line>
<line>ATOM 1137 CA ASP A 158 -0.695 -2.363 6.071 1.00 18.23 C </line>
<line>ATOM 1145 CA TRP A 159 1.791 0.291 7.098 1.00 16.43 C </line>
<line>ATOM 1159 CA ALA A 160 2.749 -1.818 10.133 1.00 15.19 C </line>
<line>ATOM 1164 CA LYS A 161 4.365 -4.183 7.603 1.00 15.35 C </line>
<line>ATOM 1173 CA VAL A 162 6.098 -1.464 5.623 1.00 14.82 C </line>
</atom-coordinate>
<distance-map>
<line> VAL LYS ALA TRP ASP ALA LYS LYS LEU LYS LYS ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 10.22 12.37 12.51 8.72 9.31 11.42 8.80 7.41 5.21 5.40 3.82 </line>
<line>LYS CA 13.46 15.11 15.39 11.69 11.25 13.08 10.36 7.90 5.71 3.81 </line>
<line>LYS CA 12.20 13.26 14.22 10.94 9.53 11.96 10.26 7.02 3.78 </line>
<line>LEU CA 9.69 10.23 10.71 7.52 5.88 8.22 6.80 3.78 </line>
<line>LYS CA 10.92 10.67 9.93 7.16 5.21 5.60 3.77 </line>
<line>LYS CA 10.44 10.11 8.06 5.72 5.28 3.83 </line>
<line>ALA CA 9.78 8.09 6.04 5.51 3.81 </line>
<line>ASP CA 6.87 5.59 5.35 3.78 </line>
<line>TRP CA 4.88 5.19 3.82 </line>
<line>ALA CA 5.63 3.82 </line>
<line>LYS CA 3.78 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ALA CA 388</line>
<line>LYS CA 269</line>
<line>LYS CA 274</line>
<line>LEU CA 304</line>
<line>LYS CA 249</line>
<line>LYS CA 241</line>
<line>ALA CA 218</line>
<line>ASP CA 307</line>
<line>TRP CA 380</line>
<line>ALA CA 326</line>
<line>LYS CA 375</line>
<line>VAL CA 496</line>
</n14>
</entryChain>
<parallel>
<x>9.95300006866455</x>
<y>0.5860000252723694</y>
<z>25.34600067138672</z>
</parallel>
<rotation>
<x>0.5960000157356262</x>
<y>-0.24199999868869781</y>
<z>-0.7649999856948853</z>
<x>-0.656000018119812</x>
<y>-0.6959999799728394</y>
<z>-0.29100000858306885</z>
<x>-0.46299999952316284</x>
<y>0.6759999990463257</y>
<z>-0.5740000009536743</z>
</rotation>
<rmsd>1.1978509426116943</rmsd>
<dmax>1.8222910165786743</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>2VEL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2VELA</entryIDChain>
<sequence>STSIN-HDVQC</sequence>
<secondary-structure>H - E</secondary-structure>
<atom-coordinate>
<line>ATOM 205 CA SER A 30 29.913 -13.011 15.411 1.00 16.60 C </line>
<line>ATOM 211 CA THR A 31 28.784 -9.399 15.817 1.00 17.30 C </line>
<line>ATOM 218 CA SER A 32 27.289 -8.464 19.227 1.00 19.34 C </line>
<line>ATOM 224 CA ILE A 33 24.550 -5.862 18.822 1.00 19.26 C </line>
<line>ATOM 232 CA ASN A 34 23.608 -4.384 22.203 1.00 19.71 C </line>
<line>ATOM 240 CA HIS A 35 20.920 -1.938 21.160 1.00 17.12 C </line>
<line>ATOM 250 CA ASP A 36 17.494 -2.640 19.659 1.00 15.43 C </line>
<line>ATOM 258 CA VAL A 37 17.783 -2.806 15.867 1.00 15.38 C </line>
<line>ATOM 265 CA GLN A 38 16.287 -5.116 13.220 1.00 15.55 C </line>
<line>ATOM 274 CA CYS A 39 19.123 -6.155 10.921 1.00 15.65 C </line>
</atom-coordinate>
<distance-map>
<line> CYS GLN VAL ASP HIS ASN ILE SER THR SER </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>SER CA 13.55 15.90 15.86 16.73 15.38 12.66 9.57 6.49 3.81 </line>
<line>THR CA 11.31 13.46 12.83 13.71 12.09 9.63 6.28 3.84 </line>
<line>SER CA 11.87 12.97 11.56 11.40 9.32 6.25 3.80 </line>
<line>ILE CA 9.59 10.01 7.99 7.80 5.83 3.81 </line>
<line>ASN CA 12.27 11.61 8.75 6.85 3.78 </line>
<line>HIS CA 11.22 9.73 6.21 3.81 </line>
<line>ASP CA 9.56 7.00 3.81 </line>
<line>VAL CA 6.12 3.82 </line>
<line>GLN CA 3.80 </line>
<line>CYS CA </line>
</distance-map>
<n14>
<line>SER CA 221</line>
<line>THR CA 271</line>
<line>SER CA 232</line>
<line>ILE CA 276</line>
<line>ASN CA 204</line>
<line>HIS CA 239</line>
<line>ASP CA 262</line>
<line>VAL CA 371</line>
<line>GLN CA 426</line>
<line>CYS CA 507</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1YDV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1YDVA</entryIDChain>
<sequence>NLDFDPSKLDV</sequence>
<secondary-structure>G EE</secondary-structure>
<atom-coordinate>
<line>ATOM 212 CA ASN A 29 28.577 16.289 3.271 1.00 8.63 C </line>
<line>ATOM 220 CA LEU A 30 25.168 14.585 3.457 1.00 14.20 C </line>
<line>ATOM 228 CA ASP A 31 22.128 16.859 3.341 1.00 17.80 C </line>
<line>ATOM 236 CA PHE A 32 19.261 15.635 5.557 1.00 16.42 C </line>
<line>ATOM 247 CA ASP A 33 16.813 16.894 8.196 1.00 14.21 C </line>
<line>ATOM 255 CA PRO A 34 17.376 15.632 11.781 1.00 9.47 C </line>
<line>ATOM 262 CA SER A 35 13.696 16.245 12.681 1.00 15.47 C </line>
<line>ATOM 268 CA LYS A 36 12.514 13.545 10.243 1.00 15.37 C </line>
<line>ATOM 277 CA LEU A 37 15.186 10.913 10.493 1.00 12.76 C </line>
<line>ATOM 285 CA ASP A 38 17.317 9.695 13.419 1.00 9.57 C </line>
<line>ATOM 293 CA VAL A 39 20.982 9.082 12.533 1.00 8.95 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ASP LEU LYS SER PRO ASP PHE ASP LEU ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 13.98 16.53 16.14 17.72 17.61 14.08 12.77 9.61 6.47 3.82 </line>
<line>LEU CA 11.41 13.59 12.75 14.40 14.81 11.45 9.88 6.36 3.80 </line>
<line>ASP CA 12.09 13.27 11.61 12.29 12.60 9.76 7.20 3.82 </line>
<line>PHE CA 9.72 10.04 7.95 8.48 9.06 6.50 3.81 </line>
<line>ASP CA 9.86 8.91 6.61 5.82 5.50 3.84 </line>
<line>PRO CA 7.51 6.16 5.36 5.51 3.84 </line>
<line>SER CA 10.22 7.52 5.95 3.83 </line>
<line>LYS CA 9.84 6.93 3.76 </line>
<line>LEU CA 6.41 3.82 </line>
<line>ASP CA 3.82 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ASN CA 235</line>
<line>LEU CA 278</line>
<line>ASP CA 228</line>
<line>PHE CA 254</line>
<line>ASP CA 216</line>
<line>PRO CA 259</line>
<line>SER CA 202</line>
<line>LYS CA 222</line>
<line>LEU CA 324</line>
<line>ASP CA 415</line>
<line>VAL CA 495</line>
</n14>
</entryChain>
<parallel>
<x>4.625</x>
<y>-21.18400001525879</y>
<z>11.366000175476074</z>
</parallel>
<rotation>
<x>0.8050000071525574</x>
<y>-0.18400000035762787</y>
<z>-0.5640000104904175</z>
<x>0.5920000076293945</x>
<y>0.18400000035762787</y>
<z>0.7850000262260437</z>
<x>0.04100000113248825</x>
<y>0.9660000205039978</y>
<z>-0.25699999928474426</z>
</rotation>
<rmsd>1.74691903591156</rmsd>
<dmax>2.620932102203369</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>3</index>
<entryChain>
<pdbID>2VEL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2VELA</entryIDChain>
<sequence>GFLAG---LKPEF</sequence>
<secondary-structure>EEEEE--- H</secondary-structure>
<atom-coordinate>
<line>ATOM 1696 CA GLY A 230 18.297 3.403 9.920 1.00 14.57 C </line>
<line>ATOM 1700 CA PHE A 231 19.931 2.408 6.679 1.00 15.75 C </line>
<line>ATOM 1711 CA LEU A 232 19.837 0.415 3.507 1.00 16.64 C </line>
<line>ATOM 1719 CA ALA A 233 23.433 -0.375 2.610 1.00 17.14 C </line>
<line>ATOM 1724 CA GLY A 234 25.454 -2.580 0.277 1.00 19.62 C </line>
<line>ATOM 1728 CA LEU A 238 26.349 -5.931 1.828 1.00 22.57 C </line>
<line>ATOM 1736 CA LYS A 239 30.025 -5.299 2.709 1.00 24.72 C </line>
<line>ATOM 1745 CA PRO A 240 32.042 -5.716 5.981 1.00 22.69 C </line>
<line>ATOM 1752 CA AGLU A 241 31.486 -2.072 6.915 0.50 20.65 C </line>
<line>ATOM 1770 CA PHE A 242 27.781 -2.943 7.375 1.00 18.81 C </line>
</atom-coordinate>
<distance-map>
<line> PHE GLU PRO LYS LEU GLY ALA LEU PHE GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 11.69 14.59 16.96 16.29 14.75 13.42 9.70 7.24 3.76 </line>
<line>PHE CA 9.53 12.40 14.60 13.31 11.59 9.82 6.05 3.75 </line>
<line>LEU CA 9.45 12.39 13.88 11.71 9.25 7.14 3.79 </line>
<line>ALA CA 6.94 9.29 10.68 8.23 6.32 3.79 </line>
<line>GLY CA 7.48 8.98 9.26 5.85 3.80 </line>
<line>LEU CA 6.46 8.20 7.05 3.83 </line>
<line>LYS CA 5.69 5.50 3.87 </line>
<line>PRO CA 5.27 3.80 </line>
<line>GLU CA 3.83 </line>
<line>PHE CA </line>
</distance-map>
<n14>
<line>GLY CA 541</line>
<line>PHE CA 616</line>
<line>LEU CA 590</line>
<line>ALA CA 520</line>
<line>GLY CA 459</line>
<line>LEU CA 440</line>
<line>LYS CA 354</line>
<line>PRO CA 314</line>
<line>GLU CA 327</line>
<line>PHE CA 451</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1YDV</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1YDVA</entryIDChain>
<sequence>GFLVGNASLKESF</sequence>
<secondary-structure>EEEE GGGG GGG</secondary-structure>
<atom-coordinate>
<line>ATOM 1803 CA GLY A 228 15.914 0.984 10.288 1.00 5.09 C </line>
<line>ATOM 1807 CA PHE A 229 19.281 -0.628 10.980 1.00 10.78 C </line>
<line>ATOM 1818 CA LEU A 230 22.260 -0.831 13.329 1.00 8.53 C </line>
<line>ATOM 1826 CA VAL A 231 25.138 -1.018 10.846 1.00 3.61 C </line>
<line>ATOM 1833 CA GLY A 232 28.525 -2.598 11.468 1.00 4.67 C </line>
<line>ATOM 1837 CA ASN A 233 31.411 -2.767 8.991 1.00 14.63 C </line>
<line>ATOM 1845 CA ALA A 234 29.759 -0.668 6.283 1.00 9.32 C </line>
<line>ATOM 1850 CA SER A 235 29.561 2.303 8.682 1.00 3.00 C </line>
<line>ATOM 1856 CA LEU A 236 33.374 2.553 8.641 1.00 11.93 C </line>
<line>ATOM 1864 CA LYS A 237 33.218 3.391 4.939 1.00 14.72 C </line>
<line>ATOM 1873 CA GLU A 238 32.410 6.691 3.227 1.00 19.30 C </line>
<line>ATOM 1882 CA SER A 239 29.671 4.876 1.285 1.00 11.68 C </line>
<line>ATOM 1888 CA PHE A 240 27.684 4.720 4.544 1.00 6.64 C </line>
</atom-coordinate>
<distance-map>
<line> PHE SER GLU LYS LEU SER ALA ASN GLY VAL LEU PHE GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 13.62 16.90 18.83 18.27 17.61 13.80 14.51 16.00 13.16 9.46 7.27 3.80 </line>
<line>PHE CA 11.86 15.24 16.91 15.71 14.64 10.93 11.48 12.48 9.46 5.87 3.80 </line>
<line>LEU CA 11.72 15.25 16.18 14.43 12.53 9.20 10.29 10.31 6.77 3.81 </line>
<line>VAL CA 8.90 12.11 13.05 10.94 9.24 5.94 6.50 6.77 3.79 </line>
<line>GLY CA 10.11 12.68 13.01 10.03 7.62 5.73 5.67 3.81 </line>
<line>ASN CA 9.47 10.99 11.12 7.59 5.68 5.41 3.80 </line>
<line>ALA CA 6.03 7.46 8.40 5.50 5.39 3.82 </line>
<line>SER CA 5.15 7.83 7.56 5.34 3.82 </line>
<line>LEU CA 7.34 8.56 6.88 3.80 </line>
<line>LYS CA 5.71 5.30 3.80 </line>
<line>GLU CA 5.29 3.82 </line>
<line>SER CA 3.82 </line>
<line>PHE CA </line>
</distance-map>
<n14>
<line>GLY CA 500</line>
<line>PHE CA 550</line>
<line>LEU CA 556</line>
<line>VAL CA 491</line>
<line>GLY CA 399</line>
<line>ASN CA 306</line>
<line>ALA CA 326</line>
<line>SER CA 409</line>
<line>LEU CA 349</line>
<line>LYS CA 300</line>
<line>GLU CA 281</line>
<line>SER CA 275</line>
<line>PHE CA 382</line>
</n14>
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<y>-2.7769999504089355</y>
<z>-5.026000022888184</z>
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