NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1YIHA-2ZLWD
confEVID 1YIHA-2ZLWD
pdbIDA 1YIH
pdbIDB 2ZLW
pdbChainA A
pdbChainB D
identity 0.42179998755455
indelSize 1
alignment <alignment>
<seq1>-VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHHH HHHH HHHHHHHH HHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHH --HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>WDKVN--EEEVG</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
<line>ATOM 3444 CA GLY D 24 -32.072 6.515 32.744 1.00 15.19 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU GLU GLU ASN VAL LYS ASP TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.84 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 14.65 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 13.34 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 9.66 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 8.13 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.62 5.30 5.54 3.81 </line>
<line>GLU CA 5.13 5.65 3.79 </line>
<line>GLU CA 5.54 3.81 </line>
<line>VAL CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1YIH</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1YIHA</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 93 CA TRP A 14 6.714 39.509 4.073 1.00 18.91 C </line>
<line>ATOM 107 CA GLY A 15 4.716 40.873 6.987 1.00 23.51 C </line>
<line>ATOM 111 CA LYS A 16 7.842 42.579 8.323 1.00 28.45 C </line>
<line>ATOM 120 CA VAL A 17 8.619 44.117 4.889 1.00 29.90 C </line>
<line>ATOM 127 CA GLY A 18 5.373 46.049 5.157 1.00 30.25 C </line>
<line>ATOM 131 CA ALA A 19 5.684 49.544 3.685 1.00 34.79 C </line>
<line>ATOM 136 CA HIS A 20 9.182 48.936 2.346 1.00 31.32 C </line>
<line>ATOM 146 CA ALA A 21 8.158 46.266 -0.201 1.00 28.69 C </line>
<line>ATOM 151 CA GLY A 22 8.418 48.770 -3.090 1.00 26.12 C </line>
<line>ATOM 155 CA GLU A 23 11.781 50.090 -1.953 1.00 21.19 C </line>
<line>ATOM 164 CA TYR A 24 12.965 46.481 -1.583 1.00 20.89 C </line>
<line>ATOM 176 CA GLY A 25 11.509 45.649 -5.033 1.00 16.06 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 11.98 10.94 13.19 11.83 8.12 9.90 10.10 6.76 5.05 5.36 3.79 </line>
<line>GLY CA 14.61 13.15 14.66 13.33 9.62 10.32 9.33 5.53 5.49 3.80 </line>
<line>LYS CA 14.19 11.82 13.32 13.00 9.29 8.83 8.64 5.31 3.84 </line>
<line>VAL CA 10.45 8.15 9.62 9.24 5.54 5.48 6.29 3.79 </line>
<line>GLY CA 11.90 10.16 10.39 9.20 6.04 5.54 3.81 </line>
<line>ALA CA 11.19 9.49 8.32 7.35 5.65 3.79 </line>
<line>HIS CA 8.41 5.98 5.15 5.49 3.83 </line>
<line>ALA CA 5.91 5.01 5.55 3.83 </line>
<line>GLY CA 4.80 5.31 3.79 </line>
<line>GLU CA 5.41 3.82 </line>
<line>TYR CA 3.84 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 391</line>
<line>GLY CA 267</line>
<line>LYS CA 250</line>
<line>VAL CA 319</line>
<line>GLY CA 226</line>
<line>ALA CA 197</line>
<line>HIS CA 257</line>
<line>ALA CA 329</line>
<line>GLY CA 294</line>
<line>GLU CA 310</line>
<line>TYR CA 366</line>
<line>GLY CA 404</line>
</n14>
</entryChain>
<parallel>
<x>-44.80699920654297</x>
<y>-33.74800109863281</y>
<z>24.658000946044922</z>
</parallel>
<rotation>
<x>0.30300000309944153</x>
<y>-0.8960000276565552</y>
<z>-0.32499998807907104</z>
<x>-0.6940000057220459</x>
<y>-0.4410000145435333</y>
<z>0.5680000185966492</z>
<x>-0.652999997138977</x>
<y>0.05299999937415123</y>
<z>-0.7559999823570251</z>
</rotation>
<rmsd>1.6389050483703613</rmsd>
<dmax>3.4544570446014404</dmax>
</indel>