NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
2QU0A-2DN1B
confEVID 2QU0A-2DN1B
pdbIDA 2QU0
pdbIDB 2DN1
pdbChainA A
pdbChainB B
identity 0.428600013256073
indelSize 1
alignment <alignment>
<seq1>VLSAADKSNVKAAWGKVGGNAGAYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGEKVAAALTKAVGHLDDLPGTLSDLSDLHAHKLRVDPVNFKLLSHSLLVTLACHLPNDFTPAVHASLDKFLANVSTVLTSKYR</seq1>
<seq2>HLTPEEKSAVTALWGKVN--VDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH</seq2>
<ss_1> HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHHH GGG HHHHHIIIII HHHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHHGGG --HHHHHHHHHHHHHHH GGGG GGG HHHH HHHHHHHHHHHHHHHHHH HHHH HHHHIIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2DN1</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2DN1B</entryIDChain>
<sequence>WGKVN--VDEVG</sequence>
<secondary-structure>GGG --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1156 CA TRP B 15 7.415 30.210 19.354 1.00 19.38 C </line>
<line>ATOM 1170 CA GLY B 16 4.291 30.591 21.507 1.00 22.29 C </line>
<line>ATOM 1174 CA LYS B 17 5.799 33.878 22.681 1.00 22.05 C </line>
<line>ATOM 1183 CA VAL B 18 6.679 35.264 19.226 1.00 18.97 C </line>
<line>ATOM 1190 CA ASN B 19 4.844 38.336 17.895 1.00 19.11 C </line>
<line>ATOM 1198 CA VAL B 20 3.762 36.915 14.534 1.00 20.31 C </line>
<line>ATOM 1205 CA ASP B 21 2.756 40.357 13.249 1.00 19.54 C </line>
<line>ATOM 1213 CA GLU B 22 6.257 41.673 13.752 1.00 19.56 C </line>
<line>ATOM 1222 CA VAL B 23 9.005 39.096 13.658 1.00 16.00 C </line>
<line>ATOM 1229 CA GLY B 24 8.622 38.168 9.983 1.00 15.39 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU ASP VAL ASN VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.35 10.67 12.81 12.73 9.03 8.65 5.11 5.21 3.81 </line>
<line>GLY CA 14.46 12.50 13.67 12.88 9.43 8.56 5.72 3.80 </line>
<line>LYS CA 13.70 10.91 11.86 11.84 8.93 6.61 3.83 </line>
<line>VAL CA 9.88 7.15 8.44 8.78 5.77 3.82 </line>
<line>ASN CA 8.77 5.99 5.50 5.48 3.81 </line>
<line>VAL CA 6.78 5.75 5.43 3.81 </line>
<line>ASP CA 7.06 6.39 3.77 </line>
<line>GLU CA 5.66 3.77 </line>
<line>VAL CA 3.81 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 339</line>
<line>GLY CA 224</line>
<line>LYS CA 221</line>
<line>VAL CA 300</line>
<line>ASN CA 256</line>
<line>VAL CA 272</line>
<line>ASP CA 240</line>
<line>GLU CA 301</line>
<line>VAL CA 367</line>
<line>GLY CA 400</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2QU0</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QU0A</entryIDChain>
<sequence>WGKVGGNAGAYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 90 CA TRP A 14 -10.884 35.550 63.142 1.00 32.76 C </line>
<line>ATOM 104 CA GLY A 15 -14.262 35.849 64.884 1.00 33.39 C </line>
<line>ATOM 108 CA LYS A 16 -12.241 37.581 67.544 1.00 35.75 C </line>
<line>ATOM 117 CA VAL A 17 -10.872 40.039 64.919 1.00 34.15 C </line>
<line>ATOM 124 CA GLY A 18 -14.523 41.006 64.279 1.00 34.56 C </line>
<line>ATOM 128 CA GLY A 19 -15.280 44.426 62.760 1.00 35.42 C </line>
<line>ATOM 132 CA ASN A 20 -11.582 45.331 62.859 1.00 35.25 C </line>
<line>ATOM 140 CA ALA A 21 -10.412 43.174 59.918 1.00 33.09 C </line>
<line>ATOM 145 CA GLY A 22 -10.416 46.212 57.611 1.00 31.17 C </line>
<line>ATOM 149 CA ALA A 23 -8.097 48.229 59.873 1.00 29.78 C </line>
<line>ATOM 154 CA TYR A 24 -5.747 45.225 60.344 1.00 27.91 C </line>
<line>ATOM 166 CA GLY A 25 -5.603 44.524 56.655 1.00 27.92 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR ALA GLY ALA ASN GLY GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.27 11.31 13.39 12.02 8.29 9.81 9.91 6.66 4.83 5.03 3.81 </line>
<line>GLY CA 14.76 13.45 14.71 13.23 9.65 10.06 8.89 5.20 5.39 3.76 </line>
<line>LYS CA 14.52 12.35 13.76 13.28 9.63 9.08 8.89 5.25 3.85 </line>
<line>VAL CA 10.78 8.61 10.01 9.58 5.92 5.72 6.58 3.83 </line>
<line>GLY CA 12.25 10.50 10.62 9.40 6.37 5.42 3.82 </line>
<line>GLY CA 11.44 9.87 8.63 7.30 5.77 3.81 </line>
<line>ASN CA 8.65 6.35 5.43 5.45 3.83 </line>
<line>ALA CA 5.97 5.11 5.56 3.81 </line>
<line>GLY CA 5.19 5.50 3.82 </line>
<line>ALA CA 5.50 3.84 </line>
<line>TYR CA 3.76 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 369</line>
<line>GLY CA 239</line>
<line>LYS CA 250</line>
<line>VAL CA 307</line>
<line>GLY CA 210</line>
<line>GLY CA 180</line>
<line>ASN CA 242</line>
<line>ALA CA 321</line>
<line>GLY CA 281</line>
<line>ALA CA 296</line>
<line>TYR CA 359</line>
<line>GLY CA 402</line>
</n14>
</entryChain>
<parallel>
<x>16.68899917602539</x>
<y>-5.052000045776367</y>
<z>-44.99599838256836</z>
</parallel>
<rotation>
<x>0.8840000033378601</x>
<y>0.017000000923871994</y>
<z>-0.46799999475479126</z>
<x>-0.10000000149011612</x>
<y>0.9829999804496765</y>
<z>-0.1550000011920929</z>
<x>0.4569999873638153</x>
<y>0.18299999833106995</y>
<z>0.8700000047683716</z>
</rotation>
<rmsd>1.7148350477218628</rmsd>
<dmax>3.764967918395996</dmax>
</indel>