NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
2QU0A-2DXMB
confEVID 2QU0A-2DXMB
pdbIDA 2QU0
pdbIDB 2DXM
pdbChainA A
pdbChainB B
identity 0.428600013256073
indelSize 1
alignment <alignment>
<seq1>-VLSAADKSNVKAAWGKVGGNAGAYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGEKVAAALTKAVGHLDDLPGTLSDLSDLHAHKLRVDPVNFKLLSHSLLVTLACHLPNDFTPAVHASLDKFLANVSTVLTSKYR</seq1>
<seq2>VHLTPEEKSAVTALWGKVN--VDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHHH GGG HHHHHIIIII HHHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHHGGG --HHHHHHHHHHHHHHH GGGG GGG HHHH HHHHHHHHHHHHHHHGGGGGGGGHHHH HHHHHHHH HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2DXM</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2DXMB</entryIDChain>
<sequence>WGKVN--VDEVG</sequence>
<secondary-structure>GGG --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2467 CA TRP B 15 32.952 -4.127 45.511 1.00 6.92 C </line>
<line>ATOM 2492 CA GLY B 16 35.748 -6.432 46.721 1.00 4.90 C </line>
<line>ATOM 2500 CA LYS B 17 38.205 -3.532 46.233 1.00 5.63 C </line>
<line>ATOM 2523 CA VAL B 18 36.040 -1.106 48.251 1.00 5.50 C </line>
<line>ATOM 2540 CA ASN B 19 37.092 0.104 51.704 1.00 5.22 C </line>
<line>ATOM 2553 CA VAL B 20 33.590 -0.046 53.242 1.00 6.46 C </line>
<line>ATOM 2570 CA ASP B 21 34.356 2.377 56.121 1.00 8.34 C </line>
<line>ATOM 2583 CA GLU B 22 36.063 4.951 53.841 1.00 9.73 C </line>
<line>ATOM 2599 CA VAL B 23 33.405 5.071 51.101 1.00 5.58 C </line>
<line>ATOM 2616 CA GLY B 24 30.685 4.906 53.741 1.00 4.96 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU ASP VAL ASN VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.43 10.77 12.71 12.52 8.77 8.57 5.12 5.34 3.82 </line>
<line>GLY CA 14.26 12.53 13.43 12.96 9.38 8.33 5.55 3.83 </line>
<line>LYS CA 13.57 10.99 11.59 12.15 9.09 6.66 3.83 </line>
<line>VAL CA 9.74 7.30 8.24 8.77 5.66 3.81 </line>
<line>ASN CA 8.26 6.22 5.40 5.67 3.83 </line>
<line>VAL CA 5.76 5.55 5.61 3.84 </line>
<line>ASP CA 5.05 5.78 3.84 </line>
<line>GLU CA 5.38 3.82 </line>
<line>VAL CA 3.79 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 663</line>
<line>GLY CA 443</line>
<line>LYS CA 414</line>
<line>VAL CA 556</line>
<line>ASN CA 470</line>
<line>VAL CA 570</line>
<line>ASP CA 517</line>
<line>GLU CA 559</line>
<line>VAL CA 716</line>
<line>GLY CA 753</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2QU0</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QU0A</entryIDChain>
<sequence>WGKVGGNAGAYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 90 CA TRP A 14 -10.884 35.550 63.142 1.00 32.76 C </line>
<line>ATOM 104 CA GLY A 15 -14.262 35.849 64.884 1.00 33.39 C </line>
<line>ATOM 108 CA LYS A 16 -12.241 37.581 67.544 1.00 35.75 C </line>
<line>ATOM 117 CA VAL A 17 -10.872 40.039 64.919 1.00 34.15 C </line>
<line>ATOM 124 CA GLY A 18 -14.523 41.006 64.279 1.00 34.56 C </line>
<line>ATOM 128 CA GLY A 19 -15.280 44.426 62.760 1.00 35.42 C </line>
<line>ATOM 132 CA ASN A 20 -11.582 45.331 62.859 1.00 35.25 C </line>
<line>ATOM 140 CA ALA A 21 -10.412 43.174 59.918 1.00 33.09 C </line>
<line>ATOM 145 CA GLY A 22 -10.416 46.212 57.611 1.00 31.17 C </line>
<line>ATOM 149 CA ALA A 23 -8.097 48.229 59.873 1.00 29.78 C </line>
<line>ATOM 154 CA TYR A 24 -5.747 45.225 60.344 1.00 27.91 C </line>
<line>ATOM 166 CA GLY A 25 -5.603 44.524 56.655 1.00 27.92 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR ALA GLY ALA ASN GLY GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.27 11.31 13.39 12.02 8.29 9.81 9.91 6.66 4.83 5.03 3.81 </line>
<line>GLY CA 14.76 13.45 14.71 13.23 9.65 10.06 8.89 5.20 5.39 3.76 </line>
<line>LYS CA 14.52 12.35 13.76 13.28 9.63 9.08 8.89 5.25 3.85 </line>
<line>VAL CA 10.78 8.61 10.01 9.58 5.92 5.72 6.58 3.83 </line>
<line>GLY CA 12.25 10.50 10.62 9.40 6.37 5.42 3.82 </line>
<line>GLY CA 11.44 9.87 8.63 7.30 5.77 3.81 </line>
<line>ASN CA 8.65 6.35 5.43 5.45 3.83 </line>
<line>ALA CA 5.97 5.11 5.56 3.81 </line>
<line>GLY CA 5.19 5.50 3.82 </line>
<line>ALA CA 5.50 3.84 </line>
<line>TYR CA 3.76 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 369</line>
<line>GLY CA 239</line>
<line>LYS CA 250</line>
<line>VAL CA 307</line>
<line>GLY CA 210</line>
<line>GLY CA 180</line>
<line>ASN CA 242</line>
<line>ALA CA 321</line>
<line>GLY CA 281</line>
<line>ALA CA 296</line>
<line>TYR CA 359</line>
<line>GLY CA 402</line>
</n14>
</entryChain>
<parallel>
<x>46.96900177001953</x>
<y>-41.930999755859375</y>
<z>-12.567999839782715</z>
</parallel>
<rotation>
<x>-0.4699999988079071</x>
<y>0.7590000033378601</y>
<z>-0.45100000500679016</z>
<x>0.4690000116825104</x>
<y>0.6480000019073486</y>
<z>0.6010000109672546</z>
<x>0.7480000257492065</x>
<y>0.07100000232458115</y>
<z>-0.6600000262260437</z>
</rotation>
<rmsd>1.603302001953125</rmsd>
<dmax>3.5810461044311523</dmax>
</indel>